Trimin1|347621|estExt_Genemark1.C_Ctg_140033 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|347621
Unique NameTrimin1|347621|estExt_Genemark1.C_Ctg_140033
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length212
Homology
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BLAST of jgi.p|Trimin1|347621 vs. uniprot
Match: A0A835Z8E7_9STRA (RGS domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8E7_9STRA)

HSP 1 Score: 404 bits (1037), Expect = 4.380e-142
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0 
Query:    1 MALLQKWWCEASWWKDSLLHGGGQHPTRSRNGSSSGSXXXXXXXRSGSISDIDAGALELDVALRVPLVLAQFQAYCERTHCTESLEFILRADGLSRLQAGSEELICELQTIAMEFCTPGGDKEINVGSSTREQALELVEKNDASAFAACYLQVYHMLASGVWPRFLASPECLKVHIGKHVLAAESRTAEPSPSSSSHSLDAFGARQPSGTL 211
            MALLQKWWCEASWWKDSLLHGGGQHPTRSRNGSSSGSXXXXXXXRSGSISDIDAGALELDVALRVPLVLAQFQAYCERTHCTESLEFILRADGLSRLQAGSEELICELQTIAMEFCTPGGDKEINVGSSTREQALELVEKNDASAFAACYLQVYHMLASGVWPRFLASPECLKVHIGKHVLAAESRTAEPSPSSSSHSLDAFGARQPSGTL
Sbjct:    1 MALLQKWWCEASWWKDSLLHGGGQHPTRSRNGSSSGSXXXXXXXRSGSISDIDAGALELDVALRVPLVLAQFQAYCERTHCTESLEFILRADGLSRLQAGSEELICELQTIAMEFCTPGGDKEINVGSSTREQALELVEKNDASAFAACYLQVYHMLASGVWPRFLASPECLKVHIGKHVLAAESRTAEPSPSSSSHSLDAFGARQPSGTL 211
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347621 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835Z8E7_9STRA4.380e-142100.00RGS domain-containing protein n=1 Tax=Tribonema mi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016137RGS domainSMARTSM00315RGS_3coord: 58..175
e-value: 2.3E-11
score: 53.7
IPR016137RGS domainPFAMPF00615RGScoord: 66..169
e-value: 5.2E-13
score: 49.3
IPR016137RGS domainPROSITEPS50132RGScoord: 58..168
score: 11.691271
IPR044926RGS, subdomain 2GENE3D1.10.167.10coord: 32..175
e-value: 1.5E-21
score: 78.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 187..211
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 24..45
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 185..211
NoneNo IPR availablePANTHERPTHR10845REGULATOR OF G PROTEIN SIGNALINGcoord: 28..193
NoneNo IPR availableCDDcd07440RGScoord: 66..173
e-value: 1.57895E-12
score: 59.7122
IPR036305RGS domain superfamilySUPERFAMILY48097Regulator of G-protein signaling, RGScoord: 55..173

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_14contigContig_14:291783..293324 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347621mRNA_3146Tribonema minus UTEX_B_3156 mRNAContig_14 291783..293437 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|347621|estExt_Genemark1.C_Ctg_140033 ID=Trimin1|347621|estExt_Genemark1.C_Ctg_140033|Name=jgi.p|Trimin1|347621|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=212bp
MALLQKWWCEASWWKDSLLHGGGQHPTRSRNGSSSGSSDSSRSSRSGSIS
DIDAGALELDVALRVPLVLAQFQAYCERTHCTESLEFILRADGLSRLQAG
SEELICELQTIAMEFCTPGGDKEINVGSSTREQALELVEKNDASAFAACY
LQVYHMLASGVWPRFLASPECLKVHIGKHVLAAESRTAEPSPSSSSHSLD
AFGARQPSGTL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016137RGS
IPR044926RGS_subdomain_2
IPR036305RGS_sf