Trimin1|347454|estExt_Genemark1.C_Ctg_120071 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|347454
Unique NameTrimin1|347454|estExt_Genemark1.C_Ctg_120071
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length453
Homology
BLAST of jgi.p|Trimin1|347454 vs. uniprot
Match: A0A835ZF21_9STRA (BZIP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF21_9STRA)

HSP 1 Score: 601 bits (1549), Expect = 3.910e-212
Identity = 452/452 (100.00%), Postives = 452/452 (100.00%), Query Frame = 0
Query:    1 MLHSDVTDEEDMDYVYLADSVDDRRKRSRERNRLHARKTRQRKKAQIESLQDRIRALKREGDLLHKQQKEQEVLGTLALMQSHAAAVPAAVAAAHGAQPPQDEAHMGKISELAQAAIAVWAEADWAAQLSEHCAALTALMNLCNTMDSQYMASLSDAAAAERAXXXXXXXXXXXXXXXXXXAALRAQLRRERNRMHAKRARDRKKLLVDASTAIVGVLDARNALARAHLRRAALSLPPALAATLSTAAAAPSSPYAEDDAASDPLPEDVFELWEYARTGPLPTPQVAVPPRQLPPRGSRGVVSNGGXXXXXXXXXXXXXXXXXXXXXXXXTSREGSAASSEDGSWCGAGVVFSRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGCAASPGAAKRARLDVLGSCCAAEYMEVLGSGXXXXXXXXXXXXXQRL 452
            MLHSDVTDEEDMDYVYLADSVDDRRKRSRERNRLHARKTRQRKKAQIESLQDRIRALKREGDLLHKQQKEQEVLGTLALMQSHAAAVPAAVAAAHGAQPPQDEAHMGKISELAQAAIAVWAEADWAAQLSEHCAALTALMNLCNTMDSQYMASLSDAAAAERAXXXXXXXXXXXXXXXXXXAALRAQLRRERNRMHAKRARDRKKLLVDASTAIVGVLDARNALARAHLRRAALSLPPALAATLSTAAAAPSSPYAEDDAASDPLPEDVFELWEYARTGPLPTPQVAVPPRQLPPRGSRGVVSNGGXXXXXXXXXXXXXXXXXXXXXXXXTSREGSAASSEDGSWCGAGVVFSRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGCAASPGAAKRARLDVLGSCCAAEYMEVLGSGXXXXXXXXXXXXXQRL
Sbjct:    1 MLHSDVTDEEDMDYVYLADSVDDRRKRSRERNRLHARKTRQRKKAQIESLQDRIRALKREGDLLHKQQKEQEVLGTLALMQSHAAAVPAAVAAAHGAQPPQDEAHMGKISELAQAAIAVWAEADWAAQLSEHCAALTALMNLCNTMDSQYMASLSDAAAAERAXXXXXXXXXXXXXXXXXXAALRAQLRRERNRMHAKRARDRKKLLVDASTAIVGVLDARNALARAHLRRAALSLPPALAATLSTAAAAPSSPYAEDDAASDPLPEDVFELWEYARTGPLPTPQVAVPPRQLPPRGSRGVVSNGGXXXXXXXXXXXXXXXXXXXXXXXXTSREGSAASSEDGSWCGAGVVFSRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGCAASPGAAKRARLDVLGSCCAAEYMEVLGSGXXXXXXXXXXXXXQRL 452          
BLAST of jgi.p|Trimin1|347454 vs. uniprot
Match: A0A835Z7C4_9STRA (BRCT domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7C4_9STRA)

HSP 1 Score: 101 bits (251), Expect = 2.610e-19
Identity = 116/260 (44.62%), Postives = 136/260 (52.31%), Query Frame = 0
Query:   41 QRKKAQIESLQDRIRALKREGDLLHKQQKEQEVLGTLALMQSHAAAVPAAVAAAHGAQPPQDEAHMGKISELAQAAIAVWAEADWAAQLSEHCAALTALMNLCNTMDSQYMASLSDAAAAERAXXXXXXXXXXXXXXXXXXAALRAQLRRERNRMHAKRARDRKKLLVDASTAIVGVLDARNALARAHLRRAALSLPPALAATLSTAAAAPSSPYAEDDAASDPLPEDVFELWEYARTGPLP-TPQVAVPPRQLPPRGSR 299
            QRKK Q+E LQDRIRAL+RE + LH Q ++Q                                    + +  A                        AL+   N MD +Y ASLS+ AAAERAXXXXXXXXXXXXXXXXXX         ERNRMHAKRARDRK+LLV+ASTAIVG+L+ARNAL +  LRRA                     P A D    DPLPEDVFELW YA+TGPLP T  V +P R++  R +R
Sbjct:   75 QRKKQQLEGLQDRIRALRREAEALHWQAQQQXXXXXXXXXXXX----------------------XXQRAPAAXDXXXXXXXXXXXXXXXXXXXXXXALLAQSNHMDQEYTASLSEVAAAERAXXXXXXXXXXXXXXXXXXXXXXXXX--ERNRMHAKRARDRKRLLVEASTAIVGLLEARNALEQGRLRRAXXXXXXXXXXXXXXXXXXX-XPVAAD---LDPLPEDVFELWAYAQTGPLPLTLDVDMPVRRVSARRTR 306          
BLAST of jgi.p|Trimin1|347454 vs. uniprot
Match: D7FPU9_ECTSI (BZIP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPU9_ECTSI)

HSP 1 Score: 72.4 bits (176), Expect = 6.570e-10
Identity = 81/262 (30.92%), Postives = 116/262 (44.27%), Query Frame = 0
Query:   23 DRRKRSRERNRLHARKTRQRKKAQIESLQDRIRALKREGDLLHKQQKEQEVLGTLALMQSHAAAVPAAVAAAHGAQPPQDEAHMG-KISELAQAAIAVWAEA----DWAAQLSEHCAALTALMNLCNTMDSQYMASLSDAAAAERAXXXXXXXXXXXXXXXXXXAALRAQLRRERNRMHAKRARDRKKLLVDASTAIVGVLDARNALARAHLRRAALSLPPALAATLSTAAAAPSSPYAED---DAASDPLPEDVFELWEYA 276
            DR+ R+RERNRLHARKTRQRKK  ++ LQ +I  L++E   L +   +    G L  +           A   G+Q P   +    K+ + A    A  +      DW  +++ H  AL  +      MD    A   + AA      XXX                R  LRRERNRMHAKR R+RKKL V+A + ++  +   NA     +R + + LP                 +AE+       +PLPE +  LW++A
Sbjct:   82 DRKARNRERNRLHARKTRQRKKQHVQELQLKIWGLRQERQRLLQLSTDHRTAGVLLALSCSPKQCQEGPA---GSQHPSSRSSPALKLPKAAATPAASRSSKGSGRDWGEEVASHEDALRKITQEFERMDGSQQAGDDEEAATHAGGKXXXGSRGAKGTLSD-----RTALRRERNRMHAKRTRNRKKLFVEACSVMIDKMKVENAQLEHEIRASGIQLP--------------EDNWAEEVRETIPEEPLPEYLAALWDFA 321          
BLAST of jgi.p|Trimin1|347454 vs. uniprot
Match: A0A6U4EHK2_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4EHK2_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 1.020e-7
Identity = 69/227 (30.40%), Postives = 101/227 (44.49%), Query Frame = 0
Query:   27 RSRERNRLHARKTRQRKKAQIESLQDRIRALKREGDLLHKQQKEQEVLGTLALMQSHAAAVPAAVAAAHGAQPPQDEAHMGKISELAQAAIAVWAEADWAAQLSEHCAALTALMNLCNTMDSQYMASLSDAAAAERAXXXXXXXXXXXXXXXXXXAALRAQLRRERNRMHAKRARDRKKLLVDASTAIVGVLDARNALARAHLRRAALSLPPALAATLSTAAAAPSS 253
            R RERNR+HARKTRQRKK Q++ LQ RI  LK EG LL +   ++     L +M   A                 D +   ++S+L +              +      +  L+   + +  + +   +D    E A                     R ++RRERNRMHAKR RDRKKL ++ S  ++  ++  N   R +LR++ L LP  L    + AAA P S
Sbjct:  175 RMRERNRMHARKTRQRKKQQMKELQARIDKLKHEGTLLRQHIFDRYTANVLLVMSGKA-----------------DRSETSQLSKLEEV-------------MDRE--GINCLLGAASALQPR-LEMTADGKLKETAPDEDKDYKPRRRGKYTPEE--RDRVRRERNRMHAKRTRDRKKLFLEESENLIFKMEEENVQMRRYLRQSGLELPEQLLREEAEAAAHPDS 366          
BLAST of jgi.p|Trimin1|347454 vs. uniprot
Match: A0A6H5L2A4_9PHAE (BZIP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2A4_9PHAE)

HSP 1 Score: 57.4 bits (137), Expect = 1.550e-5
Identity = 72/195 (36.92%), Postives = 99/195 (50.77%), Query Frame = 0
Query:   23 DRRKRSRERNRLHARKTRQRKKAQIESLQDRIRALKREGDLLHKQQKEQEVLGTL-ALMQSHAAAVPAAVAAAHGAQPPQDEAHMGKISELAQAA-IAVWAEADWAAQLSEHCAALTALMNLCNTMDSQYMASLSDAAAAERAXXXXXXXXXXXXXXXXXXAALRAQLRRERNRMHAKRARDRKKLLVDASTAIV 215
            DR+ R+RERNRLHARKTRQRKK  ++ LQ +I  L++E   L +   +    G L AL  S            H +        + K +    A+  +  +  DW  +++ H  AL  +     T + + M     A      XXXXXXXXXXX        + R  LRRERNRMHAKR R+RKKL V+A + ++
Sbjct:   83 DRKARNRERNRLHARKTRQRKKQHVQELQLKIWGLRQERQRLLQLSTDHHTAGVLLALSCSPQQCQEGPAGNQHQSSRSSPALKLPKAAATPAASRSSKGSSRDWGQEVASHEDALRKI-----TQEFERMDGSQQAGDXXXXXXXXXXXXXXXSRAAKGTLSDRTALRRERNRMHAKRTRNRKKLFVEACSVMI 272          
BLAST of jgi.p|Trimin1|347454 vs. uniprot
Match: BZP14_PHATC (bZIP transcription factor 14 n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=BZP14_PHATC)

HSP 1 Score: 56.2 bits (134), Expect = 7.670e-5
Identity = 60/221 (27.15%), Postives = 101/221 (45.70%), Query Frame = 0
Query:   21 VDDRRKRSRERNRLHARKTRQRKKAQIESLQDRIRALKREGDLLHKQQKEQEVLGTLALMQSHAAAVPAAVAAAHGAQPPQDEAHMGKI-----------SELAQAAIAVWAEADWAAQLSEHCAALTALMNLCNTMDSQYMASLSDAAAAERAXXXXXXXXXXXXXXXXXXAALRA-QLRRERNRMHAKRARDRKKLLVDASTAIVGVLDARNALARAHL 229
             DDR +RSRERNR+HARKTRQRKK Q++SL+ R        DL H+Q + ++++      + + A +   + +   +Q P ++  +  +           S++ +    +      + ++      + A     +    + +AS SD +  E+                         Q+RRERNRMHAKR RDRK++  +    +  +L+  N L R HL
Sbjct:  116 TDDRVQRSRERNRIHARKTRQRKKEQMQSLEGRA------TDLKHEQIRLKQIIN-----EKNTANILVGLFSKGQSQSPNEDPRVEALMYRSVEEIPDPSKIPELPALILPGQHASKKIKVAVPVVAASPQSMSDGGGEEVASTSDVSGDEQQVPDDGIDYDLLGKDRSKCTPEELDQIRRERNRMHAKRTRDRKRIFTEEMAEMCRILEEENHLLRVHL 325          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347454 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A835ZF21_9STRA3.910e-212100.00BZIP domain-containing protein n=1 Tax=Tribonema m... [more]
A0A835Z7C4_9STRA2.610e-1944.62BRCT domain-containing protein n=1 Tax=Tribonema m... [more]
D7FPU9_ECTSI6.570e-1030.92BZIP domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6U4EHK2_9STRA1.020e-730.40Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A6H5L2A4_9PHAE1.550e-536.92BZIP domain-containing protein n=1 Tax=Ectocarpus ... [more]
BZP14_PHATC7.670e-527.15bZIP transcription factor 14 n=1 Tax=Phaeodactylum... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 33..67
NoneNo IPR availableGENE3D1.20.5.170coord: 21..83
e-value: 4.9E-9
score: 38.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 379..405
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 163..182
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 356..409
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 281..344
IPR004827Basic-leucine zipper domainSMARTSM00338brlzneucoord: 20..84
e-value: 0.0045
score: 23.8
coord: 181..242
e-value: 1.3
score: 0.7
IPR004827Basic-leucine zipper domainPFAMPF07716bZIP_2coord: 22..71
e-value: 6.9E-5
score: 22.9
IPR004827Basic-leucine zipper domainPROSITEPS50217BZIPcoord: 22..67
score: 10.277419
IPR046347Basic-leucine zipper domain superfamilySUPERFAMILY57959Leucine zipper domaincoord: 24..70

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_12contigContig_12:510451..513247 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347454mRNA_3740Tribonema minus UTEX_B_3156 mRNAContig_12 510451..513247 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|347454|estExt_Genemark1.C_Ctg_120071 ID=Trimin1|347454|estExt_Genemark1.C_Ctg_120071|Name=jgi.p|Trimin1|347454|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=453bp
MLHSDVTDEEDMDYVYLADSVDDRRKRSRERNRLHARKTRQRKKAQIESL
QDRIRALKREGDLLHKQQKEQEVLGTLALMQSHAAAVPAAVAAAHGAQPP
QDEAHMGKISELAQAAIAVWAEADWAAQLSEHCAALTALMNLCNTMDSQY
MASLSDAAAAERARSGGGGGGAAARRAPPPSAALRAQLRRERNRMHAKRA
RDRKKLLVDASTAIVGVLDARNALARAHLRRAALSLPPALAATLSTAAAA
PSSPYAEDDAASDPLPEDVFELWEYARTGPLPTPQVAVPPRQLPPRGSRG
VVSNGGGGGSGGGSSSDAESGSEADADAEVTSREGSAASSEDGSWCGAGV
VFSRGSGHGDGGSGDGGGGLRRTRARGGSAARSGSSSSSSGGGVGGGSGG
SGSNGCAASPGAAKRARLDVLGSCCAAEYMEVLGSGGGATLLLQAAQQQQ
RL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004827bZIP
IPR046347bZIP_sf