mRNA_3740 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|347454
Unique NamemRNA_3740
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|347454 vs. uniprot
Match: A0A835ZF21_9STRA (BZIP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF21_9STRA)

HSP 1 Score: 601 bits (1549), Expect = 3.910e-212
Identity = 452/452 (100.00%), Postives = 452/452 (100.00%), Query Frame = 1 
Query:    1 MLHSDVTDEEDMDYVYLADSVDDRRKRSRERNRLHARKTRQRKKAQIESLQDRIRALKREGDLLHKQQKEQEVLGTLALMQSHAAAVPAAVAAAHGAQPPQDEAHMGKISELAQAAIAVWAEADWAAQLSEHCAALTALMNLCNTMDSQYMASLSDAAAAERAXXXXXXXXXXXXXXXXXXAALRAQLRRERNRMHAKRARDRKKLLVDASTAIVGVLDARNALARAHLRRAALSLPPALAATLSTAAAAPSSPYAEDDAASDPLPEDVFELWEYARTGPLPTPQVAVPPRQLPPRGSRGVVSNGGXXXXXXXXXXXXXXXXXXXXXXXXTSREGSAASSEDGSWCGAGVVFSRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGCAASPGAAKRARLDVLGSCCAAEYMEVLGSGXXXXXXXXXXXXXQRL 1356
            MLHSDVTDEEDMDYVYLADSVDDRRKRSRERNRLHARKTRQRKKAQIESLQDRIRALKREGDLLHKQQKEQEVLGTLALMQSHAAAVPAAVAAAHGAQPPQDEAHMGKISELAQAAIAVWAEADWAAQLSEHCAALTALMNLCNTMDSQYMASLSDAAAAERAXXXXXXXXXXXXXXXXXXAALRAQLRRERNRMHAKRARDRKKLLVDASTAIVGVLDARNALARAHLRRAALSLPPALAATLSTAAAAPSSPYAEDDAASDPLPEDVFELWEYARTGPLPTPQVAVPPRQLPPRGSRGVVSNGGXXXXXXXXXXXXXXXXXXXXXXXXTSREGSAASSEDGSWCGAGVVFSRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGCAASPGAAKRARLDVLGSCCAAEYMEVLGSGXXXXXXXXXXXXXQRL
Sbjct:    1 MLHSDVTDEEDMDYVYLADSVDDRRKRSRERNRLHARKTRQRKKAQIESLQDRIRALKREGDLLHKQQKEQEVLGTLALMQSHAAAVPAAVAAAHGAQPPQDEAHMGKISELAQAAIAVWAEADWAAQLSEHCAALTALMNLCNTMDSQYMASLSDAAAAERAXXXXXXXXXXXXXXXXXXAALRAQLRRERNRMHAKRARDRKKLLVDASTAIVGVLDARNALARAHLRRAALSLPPALAATLSTAAAAPSSPYAEDDAASDPLPEDVFELWEYARTGPLPTPQVAVPPRQLPPRGSRGVVSNGGXXXXXXXXXXXXXXXXXXXXXXXXTSREGSAASSEDGSWCGAGVVFSRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGCAASPGAAKRARLDVLGSCCAAEYMEVLGSGXXXXXXXXXXXXXQRL 452
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BLAST of jgi.p|Trimin1|347454 vs. uniprot
Match: A0A835Z7C4_9STRA (BRCT domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7C4_9STRA)

HSP 1 Score: 101 bits (251), Expect = 2.610e-19
Identity = 116/260 (44.62%), Postives = 136/260 (52.31%), Query Frame = 1 
Query:  121 QRKKAQIESLQDRIRALKREGDLLHKQQKEQEVLGTLALMQSHAAAVPAAVAAAHGAQPPQDEAHMGKISELAQAAIAVWAEADWAAQLSEHCAALTALMNLCNTMDSQYMASLSDAAAAERAXXXXXXXXXXXXXXXXXXAALRAQLRRERNRMHAKRARDRKKLLVDASTAIVGVLDARNALARAHLRRAALSLPPALAATLSTAAAAPSSPYAEDDAASDPLPEDVFELWEYARTGPLP-TPQVAVPPRQLPPRGSR 897
            QRKK Q+E LQDRIRAL+RE + LH Q ++Q                                    + +  A                        AL+   N MD +Y ASLS+ AAAERAXXXXXXXXXXXXXXXXXX         ERNRMHAKRARDRK+LLV+ASTAIVG+L+ARNAL +  LRRA                     P A D    DPLPEDVFELW YA+TGPLP T  V +P R++  R +R
Sbjct:   75 QRKKQQLEGLQDRIRALRREAEALHWQAQQQXXXXXXXXXXXX----------------------XXQRAPAAXDXXXXXXXXXXXXXXXXXXXXXXALLAQSNHMDQEYTASLSEVAAAERAXXXXXXXXXXXXXXXXXXXXXXXXX--ERNRMHAKRARDRKRLLVEASTAIVGLLEARNALEQGRLRRAXXXXXXXXXXXXXXXXXXX-XPVAAD---LDPLPEDVFELWAYAQTGPLPLTLDVDMPVRRVSARRTR 306
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BLAST of jgi.p|Trimin1|347454 vs. uniprot
Match: D7FPU9_ECTSI (BZIP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPU9_ECTSI)

HSP 1 Score: 72.4 bits (176), Expect = 6.570e-10
Identity = 81/262 (30.92%), Postives = 116/262 (44.27%), Query Frame = 1 
Query:   67 DRRKRSRERNRLHARKTRQRKKAQIESLQDRIRALKREGDLLHKQQKEQEVLGTLALMQSHAAAVPAAVAAAHGAQPPQDEAHMG-KISELAQAAIAVWAEA----DWAAQLSEHCAALTALMNLCNTMDSQYMASLSDAAAAERAXXXXXXXXXXXXXXXXXXAALRAQLRRERNRMHAKRARDRKKLLVDASTAIVGVLDARNALARAHLRRAALSLPPALAATLSTAAAAPSSPYAED---DAASDPLPEDVFELWEYA 828
            DR+ R+RERNRLHARKTRQRKK  ++ LQ +I  L++E   L +   +    G L  +           A   G+Q P   +    K+ + A    A  +      DW  +++ H  AL  +      MD    A   + AA      XXX                R  LRRERNRMHAKR R+RKKL V+A + ++  +   NA     +R + + LP                 +AE+       +PLPE +  LW++A
Sbjct:   82 DRKARNRERNRLHARKTRQRKKQHVQELQLKIWGLRQERQRLLQLSTDHRTAGVLLALSCSPKQCQEGPA---GSQHPSSRSSPALKLPKAAATPAASRSSKGSGRDWGEEVASHEDALRKITQEFERMDGSQQAGDDEEAATHAGGKXXXGSRGAKGTLSD-----RTALRRERNRMHAKRTRNRKKLFVEACSVMIDKMKVENAQLEHEIRASGIQLP--------------EDNWAEEVRETIPEEPLPEYLAALWDFA 321
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BLAST of jgi.p|Trimin1|347454 vs. uniprot
Match: A0A6U4EHK2_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4EHK2_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 1.020e-7
Identity = 69/227 (30.40%), Postives = 101/227 (44.49%), Query Frame = 1 
Query:   79 RSRERNRLHARKTRQRKKAQIESLQDRIRALKREGDLLHKQQKEQEVLGTLALMQSHAAAVPAAVAAAHGAQPPQDEAHMGKISELAQAAIAVWAEADWAAQLSEHCAALTALMNLCNTMDSQYMASLSDAAAAERAXXXXXXXXXXXXXXXXXXAALRAQLRRERNRMHAKRARDRKKLLVDASTAIVGVLDARNALARAHLRRAALSLPPALAATLSTAAAAPSS 759
            R RERNR+HARKTRQRKK Q++ LQ RI  LK EG LL +   ++     L +M   A                 D +   ++S+L +              +      +  L+   + +  + +   +D    E A                     R ++RRERNRMHAKR RDRKKL ++ S  ++  ++  N   R +LR++ L LP  L    + AAA P S
Sbjct:  175 RMRERNRMHARKTRQRKKQQMKELQARIDKLKHEGTLLRQHIFDRYTANVLLVMSGKA-----------------DRSETSQLSKLEEV-------------MDRE--GINCLLGAASALQPR-LEMTADGKLKETAPDEDKDYKPRRRGKYTPEE--RDRVRRERNRMHAKRTRDRKKLFLEESENLIFKMEEENVQMRRYLRQSGLELPEQLLREEAEAAAHPDS 366
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BLAST of jgi.p|Trimin1|347454 vs. uniprot
Match: A0A6H5L2A4_9PHAE (BZIP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2A4_9PHAE)

HSP 1 Score: 57.4 bits (137), Expect = 1.550e-5
Identity = 72/195 (36.92%), Postives = 99/195 (50.77%), Query Frame = 1 
Query:   67 DRRKRSRERNRLHARKTRQRKKAQIESLQDRIRALKREGDLLHKQQKEQEVLGTL-ALMQSHAAAVPAAVAAAHGAQPPQDEAHMGKISELAQAA-IAVWAEADWAAQLSEHCAALTALMNLCNTMDSQYMASLSDAAAAERAXXXXXXXXXXXXXXXXXXAALRAQLRRERNRMHAKRARDRKKLLVDASTAIV 645
            DR+ R+RERNRLHARKTRQRKK  ++ LQ +I  L++E   L +   +    G L AL  S            H +        + K +    A+  +  +  DW  +++ H  AL  +     T + + M     A      XXXXXXXXXXX        + R  LRRERNRMHAKR R+RKKL V+A + ++
Sbjct:   83 DRKARNRERNRLHARKTRQRKKQHVQELQLKIWGLRQERQRLLQLSTDHHTAGVLLALSCSPQQCQEGPAGNQHQSSRSSPALKLPKAAATPAASRSSKGSSRDWGQEVASHEDALRKI-----TQEFERMDGSQQAGDXXXXXXXXXXXXXXXSRAAKGTLSDRTALRRERNRMHAKRTRNRKKLFVEACSVMI 272
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BLAST of jgi.p|Trimin1|347454 vs. uniprot
Match: BZP14_PHATC (bZIP transcription factor 14 n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=BZP14_PHATC)

HSP 1 Score: 56.2 bits (134), Expect = 7.670e-5
Identity = 60/221 (27.15%), Postives = 101/221 (45.70%), Query Frame = 1 
Query:   61 VDDRRKRSRERNRLHARKTRQRKKAQIESLQDRIRALKREGDLLHKQQKEQEVLGTLALMQSHAAAVPAAVAAAHGAQPPQDEAHMGKI-----------SELAQAAIAVWAEADWAAQLSEHCAALTALMNLCNTMDSQYMASLSDAAAAERAXXXXXXXXXXXXXXXXXXAALRA-QLRRERNRMHAKRARDRKKLLVDASTAIVGVLDARNALARAHL 687
             DDR +RSRERNR+HARKTRQRKK Q++SL+ R        DL H+Q + ++++      + + A +   + +   +Q P ++  +  +           S++ +    +      + ++      + A     +    + +AS SD +  E+                         Q+RRERNRMHAKR RDRK++  +    +  +L+  N L R HL
Sbjct:  116 TDDRVQRSRERNRIHARKTRQRKKEQMQSLEGRA------TDLKHEQIRLKQIIN-----EKNTANILVGLFSKGQSQSPNEDPRVEALMYRSVEEIPDPSKIPELPALILPGQHASKKIKVAVPVVAASPQSMSDGGGEEVASTSDVSGDEQQVPDDGIDYDLLGKDRSKCTPEELDQIRRERNRMHAKRTRDRKRIFTEEMAEMCRILEEENHLLRVHL 325
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BLAST of jgi.p|Trimin1|347454 vs. uniprot
Match: A0A836C9R1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9R1_9STRA)

HSP 1 Score: 387 bits (994), Expect = 4.370e-133
Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 1 
Query:    1 MPFLARVRHSLALLVASGAVLCELLHVFARQLKPRAPRSNNPRAAVRCSAHDFLALLLHNTYHAYTYHAYGSISPMCTLLLAFFKDLIGELLLVKAASADTARALGFNSYGDAECVQWQSVQWLRCAHVFSATELPMQRAGWLFTLAEYHQMTNNHAEQGQCLITRASSTACPYGTASASRARCTARLRAGSTR 582
            MPFLARVRHSLALLVASGAVLCELLHVFARQLKPRAPRSNNPRAAVRCSAHDFLALLLHNTYHAYTYHAYGSISPMCTLLLAFFKDLIGELLLVKAASADTARALGFNSYGDAECVQWQSVQWLRCAHVFSATELPMQRAGWLFTLAEYHQMTNNHAEQGQCLITRASSTACPYGTASASRARCTARLRAGSTR
Sbjct:    1 MPFLARVRHSLALLVASGAVLCELLHVFARQLKPRAPRSNNPRAAVRCSAHDFLALLLHNTYHAYTYHAYGSISPMCTLLLAFFKDLIGELLLVKAASADTARALGFNSYGDAECVQWQSVQWLRCAHVFSATELPMQRAGWLFTLAEYHQMTNNHAEQGQCLITRASSTACPYGTASASRARCTARLRAGSTR 194
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BLAST of jgi.p|Trimin1|347454 vs. uniprot
Match: A0A6H5K0M0_9PHAE (DOCKER domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0M0_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 4.370e-16
Identity = 72/194 (37.11%), Postives = 95/194 (48.97%), Query Frame = 1 
Query:  226 MCTLLLAFFKDLIGELLLVKAASADTARALGFNSYGD-------AECVQWQSVQ--WLRCAHVFSATELPMQRAGWLFTLAEYHQMTNNHAEQGQCLI-------------------TRASSTACPYGTASASRARCTARLRAGSTR*PAPAASVGGS*GARTRHWGSLQDLRRNILGHANQAGARLSETCLPI 723
            M  LLL     LI    L K AS+D    +G + Y            +  +SVQ  +++ A VF++TELP +RA WLFTLAEYH+M NN AEQG+CL+                   T  S++     T+   R   T  LRA       P          R R W S ++L+R+I+GHANQAGARL E  LP+
Sbjct:  317 MDELLLVKRAYLIKLRYLRKVASSDGTTHMGLDGYASKYWLGLGVTDLDTESVQEIFMQAASVFNSTELPKERADWLFTLAEYHKMLNNDAEQGRCLVEIYQGFKRCLPIWDQLWKMTPLSNSTNKSFTSR--RLPTTGYLRAQIEEEAHP---------VRLRPWNSERELKRDIIGHANQAGARLGEAALPL 499
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BLAST of jgi.p|Trimin1|347454 vs. uniprot
Match: D8LBX9_ECTSI (Similar to dedicator of cytokinesis n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBX9_ECTSI)

HSP 1 Score: 67.0 bits (162), Expect = 2.950e-8
Identity = 37/80 (46.25%), Postives = 50/80 (62.50%), Query Frame = 1 
Query:  277 LVKAASADTARALGFNSYGD-------AECVQWQSVQ--WLRCAHVFSATELPMQRAGWLFTLAEYHQMTNNHAEQGQCL 489
            L K AS+D    +G + Y            +  +SVQ  +++ A VF++TELP +RA WLFTLAEYH+M NN AEQG+CL
Sbjct: 1665 LRKVASSDGTTHMGLDGYASKYWLGLGVTDLDTESVQEIFMQAASVFNSTELPKERADWLFTLAEYHKMLNNDAEQGRCL 1744
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347454 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A835ZF21_9STRA3.910e-212100.00BZIP domain-containing protein n=1 Tax=Tribonema m... [more]
A0A835Z7C4_9STRA2.610e-1944.62BRCT domain-containing protein n=1 Tax=Tribonema m... [more]
D7FPU9_ECTSI6.570e-1030.92BZIP domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6U4EHK2_9STRA1.020e-730.40Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A6H5L2A4_9PHAE1.550e-536.92BZIP domain-containing protein n=1 Tax=Ectocarpus ... [more]
BZP14_PHATC7.670e-527.15bZIP transcription factor 14 n=1 Tax=Phaeodactylum... [more]
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BLAST of jgi.p|Trimin1|347454 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A836C9R1_9STRA4.370e-133100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5K0M0_9PHAE4.370e-1637.11DOCKER domain-containing protein n=1 Tax=Ectocarpu... [more]
D8LBX9_ECTSI2.950e-846.25Similar to dedicator of cytokinesis n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_12contigContig_12:510451..513247 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|347454|estExt_Genemark1.C_Ctg_120071
DescriptionBasic region leucine zipper
COG categoryK
Max annot lvl2836|Bacillariophyta
EggNOG OGs2CYZ1@1|root,2S7C7@2759|Eukaryota,2XC3T@2836|Bacillariophyta
Evalue1.26e-05
Seed ortholog2850.Phatr45314
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionBasic leucine zipper transcription factor
Ec32 orthologEc-18_001760.1
TranscriptId347776
TrackFilteredModels1
ProteinId347454
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347454gene_3740Tribonema minus UTEX_B_3156 geneContig_12 510451..513247 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347454Trimin1|347454|estExt_Genemark1.C_Ctg_120071Tribonema minus UTEX_B_3156 polypeptideContig_12 510451..513247 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_3740_3exon_3740_3Tribonema minus UTEX_B_3156 exonContig_12 510451..511163 -
exon_3740_2exon_3740_2Tribonema minus UTEX_B_3156 exonContig_12 512116..512736 -
exon_3740_1exon_3740_1Tribonema minus UTEX_B_3156 exonContig_12 513223..513247 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_3740CDS_3740Tribonema minus UTEX_B_3156 CDSContig_12 513223..513247 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_3740 ID=mRNA_3740|Name=jgi.p|Trimin1|347454|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1359bp|location=Sequence derived from alignment at Contig_12:510451..513247- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCTGCATAGCGATGTGACCGACGAGGAGGACATGGACTATGTGTACCT
GGCCGACAGCGTCGACGACAGAAGGAAGCGCTCCAGGGAGAGGAACAGGC
TGCACGCCCGCAAGACCCGCCAGCGCAAGAAGGCCCAGATCGAGTCCCTG
CAGGACCGCATCAGGGCTCTCAAGCGCGAAGGCGACCTCCTGCACAAGCA
GCAGAAAGAGCAGGAGGTCCTCGGCACCCTGGCGCTCATGCAGTCCCACG
CAGCCGCCGTGCCCGCCGCCGTCGCCGCTGCGCACGGCGCGCAGCCCCCG
CAGGACGAGGCCCACATGGGCAAGATTTCGGAGCTCGCGCAGGCCGCCAT
CGCCGTCTGGGCGGAGGCGGACTGGGCCGCGCAGCTCTCGGAGCACTGTG
CGGCGCTCACCGCTCTCATGAACCTATGCAATACCATGGACAGCCAGTAC
ATGGCGTCGCTGTCGGATGCCGCGGCGGCAGAGCGGGCGCGCAGCGGCGG
CGGCGGCGGCGGCGCGGCGGCGCGCAGGGCGCCGCCGCCCAGCGCGGCGC
TGCGCGCGCAGCTGCGGAGGGAGCGGAATCGCATGCATGCGAAGCGCGCG
CGCGATCGGAAGAAGCTGCTGGTGGACGCCAGCACCGCCATTGTTGGCGT
ACTGGACGCGCGCAACGCGCTCGCTCGCGCCCATCTCCGCCGCGCCGCTC
TCTCCCTTCCACCCGCGCTCGCCGCCACGCTGTCCACCGCCGCTGCCGCG
CCATCATCGCCATACGCGGAAGACGACGCCGCCTCGGACCCCCTTCCCGA
GGACGTCTTTGAGCTCTGGGAGTACGCGCGCACCGGGCCGCTGCCGACGC
CGCAGGTTGCGGTGCCGCCGCGGCAGTTGCCGCCGCGCGGCAGCAGGGGC
GTCGTCAGCAACGGCGGAGGCGGCGGCAGCGGAGGCGGCAGCAGCAGCGA
CGCCGAGAGCGGCAGCGAGGCGGACGCGGACGCGGAGGTGACGTCGCGCG
AGGGCTCCGCGGCAAGTTCCGAGGACGGCAGCTGGTGCGGCGCCGGTGTC
GTCTTCTCGCGCGGCAGCGGTCATGGCGACGGCGGCAGCGGTGACGGCGG
TGGCGGGCTACGGCGCACCCGCGCACGCGGCGGGAGCGCCGCCCGCAGCG
GCAGCAGCAGCAGCAGCAGCGGCGGCGGTGTTGGCGGCGGCAGCGGCGGC
AGCGGCAGCAACGGCTGCGCGGCGTCGCCCGGCGCCGCCAAGCGCGCGCG
CCTGGATGTTCTCGGCAGCTGCTGCGCGGCGGAGTACATGGAGGTGCTGG
GTAGTGGCGGCGGCGCCACGCTGCTGCTGCAGGCGGCGCAGCAGCAGCAG
CGCTTGTGA
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protein sequence of jgi.p|Trimin1|347454

>Trimin1|347454|estExt_Genemark1.C_Ctg_120071 ID=Trimin1|347454|estExt_Genemark1.C_Ctg_120071|Name=jgi.p|Trimin1|347454|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=453bp
MLHSDVTDEEDMDYVYLADSVDDRRKRSRERNRLHARKTRQRKKAQIESL
QDRIRALKREGDLLHKQQKEQEVLGTLALMQSHAAAVPAAVAAAHGAQPP
QDEAHMGKISELAQAAIAVWAEADWAAQLSEHCAALTALMNLCNTMDSQY
MASLSDAAAAERARSGGGGGGAAARRAPPPSAALRAQLRRERNRMHAKRA
RDRKKLLVDASTAIVGVLDARNALARAHLRRAALSLPPALAATLSTAAAA
PSSPYAEDDAASDPLPEDVFELWEYARTGPLPTPQVAVPPRQLPPRGSRG
VVSNGGGGGSGGGSSSDAESGSEADADAEVTSREGSAASSEDGSWCGAGV
VFSRGSGHGDGGSGDGGGGLRRTRARGGSAARSGSSSSSSGGGVGGGSGG
SGSNGCAASPGAAKRARLDVLGSCCAAEYMEVLGSGGGATLLLQAAQQQQ
RL*
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mRNA from alignment at Contig_12:510451..513247-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_3740 ID=mRNA_3740|Name=jgi.p|Trimin1|347454|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2797bp|location=Sequence derived from alignment at Contig_12:510451..513247- (Tribonema minus UTEX_B_3156 )
ATGCTGCATAGCGATGTGACCGACGGTACGTATCAGCAATCTCTCTGATT
TTGATGATCGCCTGCACGCTGTGGTCTGTGCCTTGAAGTCGGTCACAACA
TTTGGGGCACAGTTGTTCTCTGGCTTCACGGCCCTGAAGTTGGCTCTGAG
TTGACTGCACCGCTGTCGGCAGTAGGAGGGTGCCTTGATAGTGTTTTCAT
AGTCCTTATGAAGGCATCGGTGGTGGCTGAGGCGCTGCTGCGGACCGTGC
TTCGCTCACACCATACAAAATCAAATCCACTTTTTACTCCGCTAGATGAT
CCTCGTCGGCTATTCAAAAAACTCGGGACAGCGCGAGCATAGCCAGCTGT
GGCCGTGAGCGATCGAGACAAGCAAGCTCAACACACGAAAGTCCTGAGGT
GATCGCATGACACGCTGGAGGCCGCACTGCCTGGCACCACACGTGGCACA
AGCCCCCGCTGACCCTGTCCTCTGCTGCATCCCCCTCTCGCTACCCGCGT
TGTGCCCTCAGAGGAGGACATGGACTATGTGTACCTGGCCGACAGCGTCG
ACGACAGAAGGAAGCGCTCCAGGGAGAGGAACAGGCTGCACGCCCGCAAG
ACCCGCCAGCGCAAGAAGGCCCAGATCGAGTCCCTGCAGGACCGCATCAG
GGCTCTCAAGCGCGAAGGCGACCTCCTGCACAAGCAGCAGAAAGAGCAGG
AGGTCCTCGGCACCCTGGCGCTCATGCAGTCCCACGCAGCCGCCGTGCCC
GCCGCCGTCGCCGCTGCGCACGGCGCGCAGCCCCCGCAGGACGAGGCCCA
CATGGGCAAGATTTCGGAGCTCGCGCAGGCCGCCATCGCCGTCTGGGCGG
AGGCGGACTGGGCCGCGCAGCTCTCGGAGCACTGTGCGGCGCTCACCGCT
CTCATGAACCTATGCAATACCATGGACAGCCAGTACATGGCGTCGCTGTC
GGATGCCGCGGCGGCAGAGCGGGCGCGCAGCGGCGGCGGCGGCGGCGGCG
CGGCGGCGCGCAGGGCGCCGCCGCCCAGCGCGGCGCTGCGCGCGCAGCTG
CGGAGGGAGCGGAATCGCATGCATGCGAAGCGCGCGCGCGATCGGAAGAA
GCTGCTGGTGGACGCCAGCACCGCCATTGTTGGTGAGTCACACGCCACTC
CAAGTTTCTCGCACACTTGAAGTGCGTGTGCTCAGCTGAAAGAAGACTAG
GTGCTACACGCAGTAAGCTGCAATCAGTACGCAATGCATACAATAGGAGG
ACATGCTGCGGTGTTGGCGGCGCCCTAACGTCACACAGCATCAACACCGC
TTCAGCGCCGCGACATTTGCAGCTCTGCTGTAGCTCGCTCAATGCCTGCT
GGCGCTACGAGTTTCTTTGATGTACAGGAAGTGGCGGTACAGTAAATCAA
GCAGCCTGCAACAAGCTCAAGTCAAAAACACAAACTGCAGCTGCGCGCGC
ATTCCTATGTTCGCTTGGCGCACTGTGTGAATGACGCTGCTAGCATGAGG
CTTTTTGTACAGACGCTCTCAATATCTTTGAACTGTATGCAGTGCAAAGT
GGGGGCCATCAGGATGACGTGCACAACTGAGGTAAATATCCATCTACATT
GAGGCAGATGCATACAGATCAGTGCTAACTTTCTGCATGGCTGAATAATT
GTGCAACCTTTTGCCCAATGCTGAGAGCAACCGCTCATTGCAGCAGCAAA
TGTTGGTGAGTACGCCACCAATTAGATCATTGTCAACATACAATAATGAA
GCACACGTCAGTCTTGAGCGGTCATTGCAACACGGTGCGGAAATTGCAAA
AATGGCTCATGCTTGAGACCTGCTCAGGCTCTCGAAACTACCGCCGCCCC
AAAGCGCACCTGGCTCTGCGTAGAGTCCTTCAGCCATCTGCAGACTCATC
GCGCATGCCCCCCTGTCACCACACCGTCTCACATCGACTCCGTACATGTC
TGTGACCGCGCCGCGCCGCGCCCGTCGCAAGAGTCCTTCAGCCATCTACA
GAATCATCGTGCACGCCGCCTGTCATCACAGCGTCTCACGGCTACCCCAT
ACATTTGTGTATCTGTCCGCGCGGCGCAATGCAGGCGTACTGGACGCGCG
CAACGCGCTCGCTCGCGCCCATCTCCGCCGCGCCGCTCTCTCCCTTCCAC
CCGCGCTCGCCGCCACGCTGTCCACCGCCGCTGCCGCGCCATCATCGCCA
TACGCGGAAGACGACGCCGCCTCGGACCCCCTTCCCGAGGACGTCTTTGA
GCTCTGGGAGTACGCGCGCACCGGGCCGCTGCCGACGCCGCAGGTTGCGG
TGCCGCCGCGGCAGTTGCCGCCGCGCGGCAGCAGGGGCGTCGTCAGCAAC
GGCGGAGGCGGCGGCAGCGGAGGCGGCAGCAGCAGCGACGCCGAGAGCGG
CAGCGAGGCGGACGCGGACGCGGAGGTGACGTCGCGCGAGGGCTCCGCGG
CAAGTTCCGAGGACGGCAGCTGGTGCGGCGCCGGTGTCGTCTTCTCGCGC
GGCAGCGGTCATGGCGACGGCGGCAGCGGTGACGGCGGTGGCGGGCTACG
GCGCACCCGCGCACGCGGCGGGAGCGCCGCCCGCAGCGGCAGCAGCAGCA
GCAGCAGCGGCGGCGGTGTTGGCGGCGGCAGCGGCGGCAGCGGCAGCAAC
GGCTGCGCGGCGTCGCCCGGCGCCGCCAAGCGCGCGCGCCTGGATGTTCT
CGGCAGCTGCTGCGCGGCGGAGTACATGGAGGTGCTGGGTAGTGGCGGCG
GCGCCACGCTGCTGCTGCAGGCGGCGCAGCAGCAGCAGCGCTTGTGA
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Coding sequence (CDS) from alignment at Contig_12:510451..513247-

>mRNA_3740 ID=mRNA_3740|Name=jgi.p|Trimin1|347454|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1359bp|location=Sequence derived from alignment at Contig_12:510451..513247- (Tribonema minus UTEX_B_3156 )
ATGCTGCATAGCGATGTGACCGACGAGGAGGACATGGACTATGTGTACCT
GGCCGACAGCGTCGACGACAGAAGGAAGCGCTCCAGGGAGAGGAACAGGC
TGCACGCCCGCAAGACCCGCCAGCGCAAGAAGGCCCAGATCGAGTCCCTG
CAGGACCGCATCAGGGCTCTCAAGCGCGAAGGCGACCTCCTGCACAAGCA
GCAGAAAGAGCAGGAGGTCCTCGGCACCCTGGCGCTCATGCAGTCCCACG
CAGCCGCCGTGCCCGCCGCCGTCGCCGCTGCGCACGGCGCGCAGCCCCCG
CAGGACGAGGCCCACATGGGCAAGATTTCGGAGCTCGCGCAGGCCGCCAT
CGCCGTCTGGGCGGAGGCGGACTGGGCCGCGCAGCTCTCGGAGCACTGTG
CGGCGCTCACCGCTCTCATGAACCTATGCAATACCATGGACAGCCAGTAC
ATGGCGTCGCTGTCGGATGCCGCGGCGGCAGAGCGGGCGCGCAGCGGCGG
CGGCGGCGGCGGCGCGGCGGCGCGCAGGGCGCCGCCGCCCAGCGCGGCGC
TGCGCGCGCAGCTGCGGAGGGAGCGGAATCGCATGCATGCGAAGCGCGCG
CGCGATCGGAAGAAGCTGCTGGTGGACGCCAGCACCGCCATTGTTGGCGT
ACTGGACGCGCGCAACGCGCTCGCTCGCGCCCATCTCCGCCGCGCCGCTC
TCTCCCTTCCACCCGCGCTCGCCGCCACGCTGTCCACCGCCGCTGCCGCG
CCATCATCGCCATACGCGGAAGACGACGCCGCCTCGGACCCCCTTCCCGA
GGACGTCTTTGAGCTCTGGGAGTACGCGCGCACCGGGCCGCTGCCGACGC
CGCAGGTTGCGGTGCCGCCGCGGCAGTTGCCGCCGCGCGGCAGCAGGGGC
GTCGTCAGCAACGGCGGAGGCGGCGGCAGCGGAGGCGGCAGCAGCAGCGA
CGCCGAGAGCGGCAGCGAGGCGGACGCGGACGCGGAGGTGACGTCGCGCG
AGGGCTCCGCGGCAAGTTCCGAGGACGGCAGCTGGTGCGGCGCCGGTGTC
GTCTTCTCGCGCGGCAGCGGTCATGGCGACGGCGGCAGCGGTGACGGCGG
TGGCGGGCTACGGCGCACCCGCGCACGCGGCGGGAGCGCCGCCCGCAGCG
GCAGCAGCAGCAGCAGCAGCGGCGGCGGTGTTGGCGGCGGCAGCGGCGGC
AGCGGCAGCAACGGCTGCGCGGCGTCGCCCGGCGCCGCCAAGCGCGCGCG
CCTGGATGTTCTCGGCAGCTGCTGCGCGGCGGAGTACATGGAGGTGCTGG
GTAGTGGCGGCGGCGCCACGCTGCTGCTGCAGGCGGCGCAGCAGCAGCAG
CGCTTGTGA
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