Trimin1|347238|estExt_Genemark1.C_Ctg_90127 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|347238
Unique NameTrimin1|347238|estExt_Genemark1.C_Ctg_90127
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length171
Homology
BLAST of jgi.p|Trimin1|347238 vs. uniprot
Match: A0A835YL97_9STRA (Iron-sulfur cluster assembly protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL97_9STRA)

HSP 1 Score: 323 bits (827), Expect = 2.020e-111
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0
Query:    1 MFAVARTAVISARGARAVALRSGGVGAARHYHENIVDHYENPRNVGSLDKKELDVGTGLVGAPACGDVMKLQIRVDENGVITETKFKTFGCGSAIASSSVATEWLKGKTIDESLSIRNTDIAAHLKLPPVKLHCSMLAEDAIKAAVRDYKAKRAAAGGSADEPKAAQASA 170
            MFAVARTAVISARGARAVALRSGGVGAARHYHENIVDHYENPRNVGSLDKKELDVGTGLVGAPACGDVMKLQIRVDENGVITETKFKTFGCGSAIASSSVATEWLKGKTIDESLSIRNTDIAAHLKLPPVKLHCSMLAEDAIKAAVRDYKAKRAAAGGSADEPKAAQASA
Sbjct:    1 MFAVARTAVISARGARAVALRSGGVGAARHYHENIVDHYENPRNVGSLDKKELDVGTGLVGAPACGDVMKLQIRVDENGVITETKFKTFGCGSAIASSSVATEWLKGKTIDESLSIRNTDIAAHLKLPPVKLHCSMLAEDAIKAAVRDYKAKRAAAGGSADEPKAAQASA 170          
BLAST of jgi.p|Trimin1|347238 vs. uniprot
Match: A0A8K1CUK2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CUK2_PYTOL)

HSP 1 Score: 232 bits (591), Expect = 1.510e-75
Identity = 115/149 (77.18%), Postives = 130/149 (87.25%), Query Frame = 0
Query:    7 TAVISARGARAVALRSGGVGAARHYHENIVDHYENPRNVGSLDKKELDVGTGLVGAPACGDVMKLQIRVDENGVITETKFKTFGCGSAIASSSVATEWLKGKTIDESLSIRNTDIAAHLKLPPVKLHCSMLAEDAIKAAVRDYKAKRAA 155
            T+ +SA+GA +    +  +G AR YHEN++DHYENPRNVGSLDK   DVGTGLVGAPACGDVMKLQIRVDENG I E+KFKTFGCGSAIASSSVATEWLKGKTI+E L+I+NTDIA+HLKLPPVKLHCSMLAEDAIKAA+ DYK K+ A
Sbjct:   12 TSALSAKGAVSRLAPASALGQARMYHENVIDHYENPRNVGSLDKNATDVGTGLVGAPACGDVMKLQIRVDENGTIIESKFKTFGCGSAIASSSVATEWLKGKTIEECLNIKNTDIASHLKLPPVKLHCSMLAEDAIKAAISDYKTKQTA 160          
BLAST of jgi.p|Trimin1|347238 vs. uniprot
Match: A0A3R7JQT3_9STRA (Iron-sulfur cluster assembly protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JQT3_9STRA)

HSP 1 Score: 224 bits (571), Expect = 4.810e-72
Identity = 109/151 (72.19%), Postives = 130/151 (86.09%), Query Frame = 0
Query:    4 VARTAVISARGARAVALRSGGVGAARHYHENIVDHYENPRNVGSLDKKELDVGTGLVGAPACGDVMKLQIRVDENGVITETKFKTFGCGSAIASSSVATEWLKGKTIDESLSIRNTDIAAHLKLPPVKLHCSMLAEDAIKAAVRDYKAKRA 154
            +ARTA+  + GA +  + +  +G  R YHEN++DHYENPRNVG++DK   DVGTGLVGAPACGDVMKLQI+VDENG I ++KFKTFGCGSAIASSSVATEWLKGK+++E L I+NTDIA+HLKLPPVKLHCSMLAEDAIKAA+ DYK K+A
Sbjct:    2 LARTALKRSLGAFSARVNAAPIGQTRLYHENVIDHYENPRNVGAMDKNAKDVGTGLVGAPACGDVMKLQIQVDENGTIVDSKFKTFGCGSAIASSSVATEWLKGKSVEECLKIKNTDIASHLKLPPVKLHCSMLAEDAIKAAISDYKKKQA 152          
BLAST of jgi.p|Trimin1|347238 vs. uniprot
Match: A0A7R9U6U0_9STRA (Iron-sulfur cluster assembly protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U6U0_9STRA)

HSP 1 Score: 221 bits (564), Expect = 1.650e-71
Identity = 106/129 (82.17%), Postives = 121/129 (93.80%), Query Frame = 0
Query:   25 VGAARHYHENIVDHYENPRNVGSLDKKELDVGTGLVGAPACGDVMKLQIRVDENGVITETKFKTFGCGSAIASSSVATEWLKGKTIDESLSIRNTDIAAHLKLPPVKLHCSMLAEDAIKAAVRDYKAKR 153
            VG  R YH N+VDHYENPRNVGSLD K+  VGTGLVGAPACGDVMKLQI+VDENGV+TE+KFKTFGCGSAIASSSVATEW++G+T+DE L+I+NTDIAAHLKLPPVKLHCSMLAEDAIKAAV+D+K+K+
Sbjct:   29 VGLRRSYHANVVDHYENPRNVGSLDAKDESVGTGLVGAPACGDVMKLQIKVDENGVVTESKFKTFGCGSAIASSSVATEWMQGRTVDEVLAIKNTDIAAHLKLPPVKLHCSMLAEDAIKAAVQDWKSKQ 157          
BLAST of jgi.p|Trimin1|347238 vs. uniprot
Match: A0A024GP90_9STRA (Iron-sulfur cluster assembly protein n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024GP90_9STRA)

HSP 1 Score: 221 bits (564), Expect = 1.760e-71
Identity = 105/127 (82.68%), Postives = 118/127 (92.91%), Query Frame = 0
Query:   29 RHYHENIVDHYENPRNVGSLDKKELDVGTGLVGAPACGDVMKLQIRVDENGVITETKFKTFGCGSAIASSSVATEWLKGKTIDESLSIRNTDIAAHLKLPPVKLHCSMLAEDAIKAAVRDYKAKRAA 155
            R YHEN++DHYENPRNVGSLDK   DVGTGLVGAPACGDVMKLQI+VDENG I ++KFKTFGCGSAIASSSVATEWLKG+T+DE +SI+NTDIA+HLKLPPVKLHCSMLAEDAIKAA++DYK K+ A
Sbjct:   35 RQYHENVIDHYENPRNVGSLDKAAKDVGTGLVGAPACGDVMKLQIKVDENGKIVDSKFKTFGCGSAIASSSVATEWLKGRTVDECISIKNTDIASHLKLPPVKLHCSMLAEDAIKAAIKDYKKKQTA 161          
BLAST of jgi.p|Trimin1|347238 vs. uniprot
Match: A0A1E7FQQ8_9STRA (Iron-sulfur cluster assembly protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FQQ8_9STRA)

HSP 1 Score: 221 bits (562), Expect = 4.040e-71
Identity = 107/127 (84.25%), Postives = 121/127 (95.28%), Query Frame = 0
Query:   28 ARHYHENIVDHYENPRNVGSLDKKELDVGTGLVGAPACGDVMKLQIRVDENGVITETKFKTFGCGSAIASSSVATEWLKGKTIDESLSIRNTDIAAHLKLPPVKLHCSMLAEDAIKAAVRDYKAKRA 154
            AR YHENIV+HYENPRNVGSLDK EL VGTGLVGAPACGDVMKLQI+VD++G ITE+KFKTFGCGSAIA+SSVATEW+KGK +DE L+I+N+DIAAHLKLPPVKLHCSMLAEDAIKAAV+D+KAK+A
Sbjct:   30 ARSYHENIVEHYENPRNVGSLDKNELSVGTGLVGAPACGDVMKLQIKVDDDGNITESKFKTFGCGSAIAASSVATEWVKGKNVDEVLAIKNSDIAAHLKLPPVKLHCSMLAEDAIKAAVKDWKAKQA 156          
BLAST of jgi.p|Trimin1|347238 vs. uniprot
Match: A0A1Z5JMQ2_FISSO (Iron-sulfur cluster assembly protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JMQ2_FISSO)

HSP 1 Score: 221 bits (562), Expect = 4.320e-71
Identity = 107/127 (84.25%), Postives = 120/127 (94.49%), Query Frame = 0
Query:   29 RHYHENIVDHYENPRNVGSLDKKELDVGTGLVGAPACGDVMKLQIRVDENGVITETKFKTFGCGSAIASSSVATEWLKGKTIDESLSIRNTDIAAHLKLPPVKLHCSMLAEDAIKAAVRDYKAKRAA 155
            R YHENIV+HYENPRNVGSLDK +  VGTGLVGAPACGDVMKLQI+VDENG+ITE+KFKTFGCGSAIASSSVATEW+KGK++DE LSI+N+DIA+HLKLPPVKLHCSMLAEDAIKAAV+D+K K AA
Sbjct:   28 RGYHENIVEHYENPRNVGSLDKNDKSVGTGLVGAPACGDVMKLQIKVDENGIITESKFKTFGCGSAIASSSVATEWVKGKSVDEVLSIKNSDIASHLKLPPVKLHCSMLAEDAIKAAVKDWKEKSAA 154          
BLAST of jgi.p|Trimin1|347238 vs. uniprot
Match: G4YNR1_PHYSP (Iron-sulfur cluster assembly protein n=21 Tax=Peronosporaceae TaxID=4777 RepID=G4YNR1_PHYSP)

HSP 1 Score: 220 bits (561), Expect = 4.710e-71
Identity = 111/158 (70.25%), Postives = 133/158 (84.18%), Query Frame = 0
Query:    4 VARTAVISARGARAVALRSGGVGA----ARHYHENIVDHYENPRNVGSLDKKELDVGTGLVGAPACGDVMKLQIRVDENGVITETKFKTFGCGSAIASSSVATEWLKGKTIDESLSIRNTDIAAHLKLPPVKLHCSMLAEDAIKAAVRDYKAKRAAAG 157
            +AR+A+  + GA + A ++    A     R YHEN++DHYENPRNVG++DK   DVGTGLVGAPACGDVMKLQI+VDENG I ++KFKTFGCGSAIASSSVATEWLKGK+++E L I+NTDIA+HLKLPPVKLHCSMLAEDAIKAA+ DYK K+AA+G
Sbjct:    2 IARSALKRSLGAFSAARKAAPAPAFAQQTRMYHENVIDHYENPRNVGAMDKNAKDVGTGLVGAPACGDVMKLQIQVDENGTIVDSKFKTFGCGSAIASSSVATEWLKGKSVEECLKIKNTDIASHLKLPPVKLHCSMLAEDAIKAAISDYKRKQAASG 159          
BLAST of jgi.p|Trimin1|347238 vs. uniprot
Match: K3XAL1_GLOUD (Iron-sulfur cluster assembly protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XAL1_GLOUD)

HSP 1 Score: 220 bits (560), Expect = 6.470e-71
Identity = 106/135 (78.52%), Postives = 120/135 (88.89%), Query Frame = 0
Query:   22 SGGVGAARHYHENIVDHYENPRNVGSLDKKELDVGTGLVGAPACGDVMKLQIRVDENGVITETKFKTFGCGSAIASSSVATEWLKGKTIDESLSIRNTDIAAHLKLPPVKLHCSMLAEDAIKAAVRDYKAKRAAA 156
            SG     R YHEN++DHYENPRNVGS+DKK  +VGTGLVGAPACGDVMKLQI VDENG I ++KFKTFGCGSAIASSSVATEWLKGKT++E L I+NTDIA+HLKLPPVKLHCSMLAEDAIKAA+ DY+ K+A+A
Sbjct:   22 SGAAQQTRLYHENVIDHYENPRNVGSMDKKAKNVGTGLVGAPACGDVMKLQIEVDENGTIVDSKFKTFGCGSAIASSSVATEWLKGKTVEECLKIKNTDIASHLKLPPVKLHCSMLAEDAIKAAISDYQKKQASA 156          
BLAST of jgi.p|Trimin1|347238 vs. uniprot
Match: A0A6G0XIV5_9STRA (Iron-sulfur cluster assembly protein n=2 Tax=Eukaryota TaxID=2759 RepID=A0A6G0XIV5_9STRA)

HSP 1 Score: 219 bits (559), Expect = 7.780e-71
Identity = 107/127 (84.25%), Postives = 115/127 (90.55%), Query Frame = 0
Query:   27 AARHYHENIVDHYENPRNVGSLDKKELDVGTGLVGAPACGDVMKLQIRVDENGVITETKFKTFGCGSAIASSSVATEWLKGKTIDESLSIRNTDIAAHLKLPPVKLHCSMLAEDAIKAAVRDYKAKR 153
            A R YHENI+DHYENPRNVGSLDKK   VGTGLVGAPACGDVMKLQI VDENG I ++KFKTFGCGSAIASSSVATEWLKGK +D+ LSI+NTDIA HLKLPPVKLHCSMLAEDAIKAAV+DYK K+
Sbjct:   21 AVRMYHENIIDHYENPRNVGSLDKKSASVGTGLVGAPACGDVMKLQIEVDENGTIIDSKFKTFGCGSAIASSSVATEWLKGKNVDDCLSIKNTDIANHLKLPPVKLHCSMLAEDAIKAAVQDYKDKQ 147          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347238 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YL97_9STRA2.020e-111100.00Iron-sulfur cluster assembly protein n=1 Tax=Tribo... [more]
A0A8K1CUK2_PYTOL1.510e-7577.18Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A3R7JQT3_9STRA4.810e-7272.19Iron-sulfur cluster assembly protein n=3 Tax=Phyto... [more]
A0A7R9U6U0_9STRA1.650e-7182.17Iron-sulfur cluster assembly protein n=1 Tax=Pingu... [more]
A0A024GP90_9STRA1.760e-7182.68Iron-sulfur cluster assembly protein n=2 Tax=Albug... [more]
A0A1E7FQQ8_9STRA4.040e-7184.25Iron-sulfur cluster assembly protein n=1 Tax=Fragi... [more]
A0A1Z5JMQ2_FISSO4.320e-7184.25Iron-sulfur cluster assembly protein n=2 Tax=Fistu... [more]
G4YNR1_PHYSP4.710e-7170.25Iron-sulfur cluster assembly protein n=21 Tax=Pero... [more]
K3XAL1_GLOUD6.470e-7178.52Iron-sulfur cluster assembly protein n=1 Tax=Globi... [more]
A0A6G0XIV5_9STRA7.780e-7184.25Iron-sulfur cluster assembly protein n=2 Tax=Eukar... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.1010.10coord: 30..158
e-value: 5.2E-51
score: 174.2
NoneNo IPR availableSUPERFAMILY82649SufE/NifUcoord: 30..153
IPR002871NIF system FeS cluster assembly, NifU, N-terminalPFAMPF01592NifU_Ncoord: 31..154
e-value: 2.2E-53
score: 179.8
IPR002871NIF system FeS cluster assembly, NifU, N-terminalPANTHERPTHR10093IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOGcoord: 23..167
IPR002871NIF system FeS cluster assembly, NifU, N-terminalCDDcd06664IscU_likecoord: 31..145
e-value: 4.5473E-46
score: 145.085
IPR011339ISC system FeS cluster assembly, IscU scaffoldTIGRFAMTIGR01999TIGR01999coord: 31..153
e-value: 8.0E-66
score: 217.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_9contigContig_9:1240190..1243309 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347238mRNA_3619Tribonema minus UTEX_B_3156 mRNAContig_9 1239626..1243975 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|347238|estExt_Genemark1.C_Ctg_90127 ID=Trimin1|347238|estExt_Genemark1.C_Ctg_90127|Name=jgi.p|Trimin1|347238|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=171bp
MFAVARTAVISARGARAVALRSGGVGAARHYHENIVDHYENPRNVGSLDK
KELDVGTGLVGAPACGDVMKLQIRVDENGVITETKFKTFGCGSAIASSSV
ATEWLKGKTIDESLSIRNTDIAAHLKLPPVKLHCSMLAEDAIKAAVRDYK
AKRAAAGGSADEPKAAQASA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002871NIF_FeS_clus_asmbl_NifU_N
IPR011339ISC_FeS_clus_asmbl_IscU