mRNA_3619 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|347238
Unique Name	mRNA_3619
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

[Close]

BLAST of jgi.p|Trimin1|347238 vs. uniprot
Match: A0A835YL97_9STRA (Iron-sulfur cluster assembly protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL97_9STRA)

HSP 1 Score: 322 bits (826), Expect = 1.930e-107
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 2

Query:   44 MFAVARTAVISARGARAVALRSGGVGAARHYHENIVDHYENPRNVGSLDKKELDVGTGLVGAPACGDVMKLQIRVDENGVITETKFKTFGCGSAIASSSVATEWLKGKTIDESLSIRNTDIAAHLKLPPVKLHCSMLAEDAIKAAVRDYKAKRAAAGGSADEPKAAQASA 553
            MFAVARTAVISARGARAVALRSGGVGAARHYHENIVDHYENPRNVGSLDKKELDVGTGLVGAPACGDVMKLQIRVDENGVITETKFKTFGCGSAIASSSVATEWLKGKTIDESLSIRNTDIAAHLKLPPVKLHCSMLAEDAIKAAVRDYKAKRAAAGGSADEPKAAQASA
Sbjct:    1 MFAVARTAVISARGARAVALRSGGVGAARHYHENIVDHYENPRNVGSLDKKELDVGTGLVGAPACGDVMKLQIRVDENGVITETKFKTFGCGSAIASSSVATEWLKGKTIDESLSIRNTDIAAHLKLPPVKLHCSMLAEDAIKAAVRDYKAKRAAAGGSADEPKAAQASA 170

[Close]

BLAST of jgi.p|Trimin1|347238 vs. uniprot
Match: A0A8K1CUK2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CUK2_PYTOL)

HSP 1 Score: 231 bits (590), Expect = 7.240e-72
Identity = 115/149 (77.18%), Postives = 130/149 (87.25%), Query Frame = 2

Query:   62 TAVISARGARAVALRSGGVGAARHYHENIVDHYENPRNVGSLDKKELDVGTGLVGAPACGDVMKLQIRVDENGVITETKFKTFGCGSAIASSSVATEWLKGKTIDESLSIRNTDIAAHLKLPPVKLHCSMLAEDAIKAAVRDYKAKRAA 508
            T+ +SA+GA +    +  +G AR YHEN++DHYENPRNVGSLDK   DVGTGLVGAPACGDVMKLQIRVDENG I E+KFKTFGCGSAIASSSVATEWLKGKTI+E L+I+NTDIA+HLKLPPVKLHCSMLAEDAIKAA+ DYK K+ A
Sbjct:   12 TSALSAKGAVSRLAPASALGQARMYHENVIDHYENPRNVGSLDKNATDVGTGLVGAPACGDVMKLQIRVDENGTIIESKFKTFGCGSAIASSSVATEWLKGKTIEECLNIKNTDIASHLKLPPVKLHCSMLAEDAIKAAISDYKTKQTA 160

[Close]

BLAST of jgi.p|Trimin1|347238 vs. uniprot
Match: A0A3R7JQT3_9STRA (Iron-sulfur cluster assembly protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JQT3_9STRA)

HSP 1 Score: 223 bits (569), Expect = 3.000e-68
Identity = 109/151 (72.19%), Postives = 130/151 (86.09%), Query Frame = 2

Query:   53 VARTAVISARGARAVALRSGGVGAARHYHENIVDHYENPRNVGSLDKKELDVGTGLVGAPACGDVMKLQIRVDENGVITETKFKTFGCGSAIASSSVATEWLKGKTIDESLSIRNTDIAAHLKLPPVKLHCSMLAEDAIKAAVRDYKAKRA 505
            +ARTA+  + GA +  + +  +G  R YHEN++DHYENPRNVG++DK   DVGTGLVGAPACGDVMKLQI+VDENG I ++KFKTFGCGSAIASSSVATEWLKGK+++E L I+NTDIA+HLKLPPVKLHCSMLAEDAIKAA+ DYK K+A
Sbjct:    2 LARTALKRSLGAFSARVNAAPIGQTRLYHENVIDHYENPRNVGAMDKNAKDVGTGLVGAPACGDVMKLQIQVDENGTIVDSKFKTFGCGSAIASSSVATEWLKGKSVEECLKIKNTDIASHLKLPPVKLHCSMLAEDAIKAAISDYKKKQA 152

[Close]

BLAST of jgi.p|Trimin1|347238 vs. uniprot
Match: A0A7R9U6U0_9STRA (Iron-sulfur cluster assembly protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U6U0_9STRA)

HSP 1 Score: 221 bits (564), Expect = 4.980e-68
Identity = 106/129 (82.17%), Postives = 121/129 (93.80%), Query Frame = 2

Query:  116 VGAARHYHENIVDHYENPRNVGSLDKKELDVGTGLVGAPACGDVMKLQIRVDENGVITETKFKTFGCGSAIASSSVATEWLKGKTIDESLSIRNTDIAAHLKLPPVKLHCSMLAEDAIKAAVRDYKAKR 502
            VG  R YH N+VDHYENPRNVGSLD K+  VGTGLVGAPACGDVMKLQI+VDENGV+TE+KFKTFGCGSAIASSSVATEW++G+T+DE L+I+NTDIAAHLKLPPVKLHCSMLAEDAIKAAV+D+K+K+
Sbjct:   29 VGLRRSYHANVVDHYENPRNVGSLDAKDESVGTGLVGAPACGDVMKLQIKVDENGVVTESKFKTFGCGSAIASSSVATEWMQGRTVDEVLAIKNTDIAAHLKLPPVKLHCSMLAEDAIKAAVQDWKSKQ 157

[Close]

BLAST of jgi.p|Trimin1|347238 vs. uniprot
Match: A0A024GP90_9STRA (Iron-sulfur cluster assembly protein n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024GP90_9STRA)

HSP 1 Score: 221 bits (564), Expect = 5.320e-68
Identity = 105/127 (82.68%), Postives = 118/127 (92.91%), Query Frame = 2

Query:  128 RHYHENIVDHYENPRNVGSLDKKELDVGTGLVGAPACGDVMKLQIRVDENGVITETKFKTFGCGSAIASSSVATEWLKGKTIDESLSIRNTDIAAHLKLPPVKLHCSMLAEDAIKAAVRDYKAKRAA 508
            R YHEN++DHYENPRNVGSLDK   DVGTGLVGAPACGDVMKLQI+VDENG I ++KFKTFGCGSAIASSSVATEWLKG+T+DE +SI+NTDIA+HLKLPPVKLHCSMLAEDAIKAA++DYK K+ A
Sbjct:   35 RQYHENVIDHYENPRNVGSLDKAAKDVGTGLVGAPACGDVMKLQIKVDENGKIVDSKFKTFGCGSAIASSSVATEWLKGRTVDECISIKNTDIASHLKLPPVKLHCSMLAEDAIKAAIKDYKKKQTA 161

[Close]

BLAST of jgi.p|Trimin1|347238 vs. uniprot
Match: A0A1E7FQQ8_9STRA (Iron-sulfur cluster assembly protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FQQ8_9STRA)

HSP 1 Score: 221 bits (562), Expect = 1.210e-67
Identity = 107/127 (84.25%), Postives = 121/127 (95.28%), Query Frame = 2

Query:  125 ARHYHENIVDHYENPRNVGSLDKKELDVGTGLVGAPACGDVMKLQIRVDENGVITETKFKTFGCGSAIASSSVATEWLKGKTIDESLSIRNTDIAAHLKLPPVKLHCSMLAEDAIKAAVRDYKAKRA 505
            AR YHENIV+HYENPRNVGSLDK EL VGTGLVGAPACGDVMKLQI+VD++G ITE+KFKTFGCGSAIA+SSVATEW+KGK +DE L+I+N+DIAAHLKLPPVKLHCSMLAEDAIKAAV+D+KAK+A
Sbjct:   30 ARSYHENIVEHYENPRNVGSLDKNELSVGTGLVGAPACGDVMKLQIKVDDDGNITESKFKTFGCGSAIAASSVATEWVKGKNVDEVLAIKNSDIAAHLKLPPVKLHCSMLAEDAIKAAVKDWKAKQA 156

[Close]

BLAST of jgi.p|Trimin1|347238 vs. uniprot
Match: A0A1Z5JMQ2_FISSO (Iron-sulfur cluster assembly protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JMQ2_FISSO)

HSP 1 Score: 221 bits (562), Expect = 1.300e-67
Identity = 107/127 (84.25%), Postives = 120/127 (94.49%), Query Frame = 2

Query:  128 RHYHENIVDHYENPRNVGSLDKKELDVGTGLVGAPACGDVMKLQIRVDENGVITETKFKTFGCGSAIASSSVATEWLKGKTIDESLSIRNTDIAAHLKLPPVKLHCSMLAEDAIKAAVRDYKAKRAA 508
            R YHENIV+HYENPRNVGSLDK +  VGTGLVGAPACGDVMKLQI+VDENG+ITE+KFKTFGCGSAIASSSVATEW+KGK++DE LSI+N+DIA+HLKLPPVKLHCSMLAEDAIKAAV+D+K K AA
Sbjct:   28 RGYHENIVEHYENPRNVGSLDKNDKSVGTGLVGAPACGDVMKLQIKVDENGIITESKFKTFGCGSAIASSSVATEWVKGKSVDEVLSIKNSDIASHLKLPPVKLHCSMLAEDAIKAAVKDWKEKSAA 154

[Close]

BLAST of jgi.p|Trimin1|347238 vs. uniprot
Match: K3XAL1_GLOUD (Iron-sulfur cluster assembly protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XAL1_GLOUD)

HSP 1 Score: 220 bits (560), Expect = 1.920e-67
Identity = 106/135 (78.52%), Postives = 120/135 (88.89%), Query Frame = 2

Query:  107 SGGVGAARHYHENIVDHYENPRNVGSLDKKELDVGTGLVGAPACGDVMKLQIRVDENGVITETKFKTFGCGSAIASSSVATEWLKGKTIDESLSIRNTDIAAHLKLPPVKLHCSMLAEDAIKAAVRDYKAKRAAA 511
            SG     R YHEN++DHYENPRNVGS+DKK  +VGTGLVGAPACGDVMKLQI VDENG I ++KFKTFGCGSAIASSSVATEWLKGKT++E L I+NTDIA+HLKLPPVKLHCSMLAEDAIKAA+ DY+ K+A+A
Sbjct:   22 SGAAQQTRLYHENVIDHYENPRNVGSMDKKAKNVGTGLVGAPACGDVMKLQIEVDENGTIVDSKFKTFGCGSAIASSSVATEWLKGKTVEECLKIKNTDIASHLKLPPVKLHCSMLAEDAIKAAISDYQKKQASA 156

[Close]

BLAST of jgi.p|Trimin1|347238 vs. uniprot
Match: A0A6G0XIV5_9STRA (Iron-sulfur cluster assembly protein n=2 Tax=Eukaryota TaxID=2759 RepID=A0A6G0XIV5_9STRA)

HSP 1 Score: 219 bits (559), Expect = 2.300e-67
Identity = 107/127 (84.25%), Postives = 115/127 (90.55%), Query Frame = 2

Query:  122 AARHYHENIVDHYENPRNVGSLDKKELDVGTGLVGAPACGDVMKLQIRVDENGVITETKFKTFGCGSAIASSSVATEWLKGKTIDESLSIRNTDIAAHLKLPPVKLHCSMLAEDAIKAAVRDYKAKR 502
            A R YHENI+DHYENPRNVGSLDKK   VGTGLVGAPACGDVMKLQI VDENG I ++KFKTFGCGSAIASSSVATEWLKGK +D+ LSI+NTDIA HLKLPPVKLHCSMLAEDAIKAAV+DYK K+
Sbjct:   21 AVRMYHENIIDHYENPRNVGSLDKKSASVGTGLVGAPACGDVMKLQIEVDENGTIIDSKFKTFGCGSAIASSSVATEWLKGKNVDDCLSIKNTDIANHLKLPPVKLHCSMLAEDAIKAAVQDYKDKQ 147

[Close]

BLAST of jgi.p|Trimin1|347238 vs. uniprot
Match: F0WFU8_9STRA (Iron-sulfur cluster assembly protein n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WFU8_9STRA)

HSP 1 Score: 221 bits (562), Expect = 2.510e-67
Identity = 104/125 (83.20%), Postives = 117/125 (93.60%), Query Frame = 2

Query:  128 RHYHENIVDHYENPRNVGSLDKKELDVGTGLVGAPACGDVMKLQIRVDENGVITETKFKTFGCGSAIASSSVATEWLKGKTIDESLSIRNTDIAAHLKLPPVKLHCSMLAEDAIKAAVRDYKAKR 502
            R YHEN++DHYENPRNVGSLDK + DVGTGLVGAPACGDVMKLQI+VDENG I ++KFKTFGCGSAIASSSVATEWLKG+T+DE +SI+NTDIA+HLKLPPVKLHCSMLAEDAIKAA+ DYK K+
Sbjct:   61 RQYHENVIDHYENPRNVGSLDKADKDVGTGLVGAPACGDVMKLQIKVDENGRIVDSKFKTFGCGSAIASSSVATEWLKGRTVDECISIKNTDIASHLKLPPVKLHCSMLAEDAIKAAINDYKQKQ 185

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|347238 vs. uniprot

BLAST of jgi.p|Trimin1|347238 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835YL97_9STRA	1.930e-107	100.00	Iron-sulfur cluster assembly protein n=1 Tax=Tribo...	[more]
A0A8K1CUK2_PYTOL	7.240e-72	77.18	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
A0A3R7JQT3_9STRA	3.000e-68	72.19	Iron-sulfur cluster assembly protein n=3 Tax=Phyto...	[more]
A0A7R9U6U0_9STRA	4.980e-68	82.17	Iron-sulfur cluster assembly protein n=1 Tax=Pingu...	[more]
A0A024GP90_9STRA	5.320e-68	82.68	Iron-sulfur cluster assembly protein n=2 Tax=Albug...	[more]
A0A1E7FQQ8_9STRA	1.210e-67	84.25	Iron-sulfur cluster assembly protein n=1 Tax=Fragi...	[more]
A0A1Z5JMQ2_FISSO	1.300e-67	84.25	Iron-sulfur cluster assembly protein n=2 Tax=Fistu...	[more]
K3XAL1_GLOUD	1.920e-67	78.52	Iron-sulfur cluster assembly protein n=1 Tax=Globi...	[more]
A0A6G0XIV5_9STRA	2.300e-67	84.25	Iron-sulfur cluster assembly protein n=2 Tax=Eukar...	[more]
F0WFU8_9STRA	2.510e-67	83.20	Iron-sulfur cluster assembly protein n=1 Tax=Albug...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_9	contig	Contig_9:1239626..1243975 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|347238\|estExt_Genemark1.C_Ctg_90127
BRITE	ko00000,ko03029
KEGG ko	ko:K22068
Description	Scaffold protein for the de novo synthesis of iron- sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic 2Fe-2S and 4Fe-4S proteins
COG category	C
Max annot lvl	4776\|Peronosporales
EggNOG OGs	COG0822@1\|root,KOG3361@2759\|Eukaryota,3Q7EY@4776\|Peronosporales
Evalue	1.01e-73
Seed ortholog	325452.fgenesh_scip_prom.46568.1569
Hectar predicted targeting category	mitochondrion
TranscriptId	347560
Track	FilteredModels1
ProteinId	347238

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|347238	gene_3619	Tribonema minus UTEX_B_3156	gene	Contig_9 1239626..1243975 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|347238	Trimin1\|347238\|estExt_Genemark1.C_Ctg_90127	Tribonema minus UTEX_B_3156	polypeptide	Contig_9 1240190..1243309 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_3619_1	exon_3619_1	Tribonema minus UTEX_B_3156	exon	Contig_9 1239626..1239655 +
exon_3619_2	exon_3619_2	Tribonema minus UTEX_B_3156	exon	Contig_9 1240177..1240411 +
exon_3619_3	exon_3619_3	Tribonema minus UTEX_B_3156	exon	Contig_9 1241691..1241937 +
exon_3619_4	exon_3619_4	Tribonema minus UTEX_B_3156	exon	Contig_9 1243266..1243975 +

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR5_3619	UTR5_3619	Tribonema minus UTEX_B_3156	five_prime_UTR	Contig_9 1239626..1239655 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_3619	CDS_3619	Tribonema minus UTEX_B_3156	CDS	Contig_9 1240190..1240411 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_3619	UTR3_3619	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_9 1243310..1243975 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_9:1239626..1243975+
coding sequence from alignment at Contig_9:1239626..1243975+

spliced messenger RNA

>mRNA_3619 ID=mRNA_3619|Name=jgi.p|Trimin1|347238|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1222bp|location=Sequence derived from alignment at Contig_9:1239626..1243975+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GGAAAAGAGACCCCAGGAGCGCGACAGCAGAACCAAATCCACAATGTTTG
CCGTGGCAAGAACAGCGGTGATATCTGCCCGCGGCGCCAGGGCGGTTGCC
CTGAGGAGCGGCGGCGTCGGCGCAGCCCGGCACTACCATGAGAACATCGT
CGATCACTACGAGAACCCTCGTAACGTCGGCAGCCTGGATAAGAAGGAGC
TGGATGTGGGGACTGGGCTGGTGGGGGCGCCAGCGTGTGGCGATGTGATG
AAACTGCAGATCAGGGTGGACGAGAACGGTGTGATCACGGAGACCAAGTT
CAAGACGTTCGGCTGCGGCAGCGCGATCGCGAGCAGCAGCGTCGCGACCG
AGTGGCTCAAGGGCAAGACTATCGACGAGTCGCTGAGCATCCGCAACACG
GACATCGCCGCGCACCTCAAGCTGCCGCCCGTCAAGCTGCACTGCAGCAT
GCTCGCGGAGGACGCGATCAAGGCGGCGGTGCGCGACTACAAGGCCAAGC
GCGCGGCGGCAGGCGGCAGTGCCGACGAGCCCAAGGCCGCGCAGGCTTCC
GCCTGAGCGCGCGGCGCAGCACCGCTCGGCGCTGCCGCTCCGCCTCGACT
GAGCACTGCCAGTTTTCCTCTGCAGCAGTGGCAGCAGCGGCAGCGGCAGC
AGCAGCAGCAGCAGCGGCAGCAGCGGTGCACAGGGGCGGATTTGCGAAGG
GCCCGTGTGCAGTAGCGGCAGCGTAGCAGCAGGGCCTTGCGCCTGCCCGC
GCGAGGGGCTTGTTGTACAACTTGTACTTCAACTCGCAGTACTTGGACCT
GGTACCGGCCAGCAGCCATAGCAGCGGCGACAGCGGCGGTGGCGGCAGCG
GCAGCGCAATCGGCGCTCAATGGACGGGGCCTCACACATGTTGCGCGCAC
GCATGCGCGATCGGCGGGAGCGCATTCATACAAGGGAAAGGCGCTACGAA
GAACACTTTCTCCACTTCTCTGTTGGGGAGTCGCCTGGGCAGTCGCCACT
TCCCGGATGGGCAGTTGGAGTAGAGCGTGCTAGCACTCGGCTAGGGCAGT
GGCGCGCGGCGCATTCGCCGCACACGTTTCAGTCCATGGTTTGGCAGGCT
CAGGAGCCCCCAGCTGGTTTTGCGGTTCGCTGGTTTATTCGCGAGCCGCG
CTTGTACGCTAGCACTGGCTACGACTCAGCTCCTGTGCCTCTCAAGATGT
AGTCGGAGTGCGGGGTTGGCGG

protein sequence of jgi.p|Trimin1|347238

>Trimin1|347238|estExt_Genemark1.C_Ctg_90127 ID=Trimin1|347238|estExt_Genemark1.C_Ctg_90127|Name=jgi.p|Trimin1|347238|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=171bp
MFAVARTAVISARGARAVALRSGGVGAARHYHENIVDHYENPRNVGSLDK
KELDVGTGLVGAPACGDVMKLQIRVDENGVITETKFKTFGCGSAIASSSV
ATEWLKGKTIDESLSIRNTDIAAHLKLPPVKLHCSMLAEDAIKAAVRDYK
AKRAAAGGSADEPKAAQASA*

mRNA from alignment at Contig_9:1239626..1243975+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_3619 ID=mRNA_3619|Name=jgi.p|Trimin1|347238|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4350bp|location=Sequence derived from alignment at Contig_9:1239626..1243975+ (Tribonema minus UTEX_B_3156 )
GGAAAAGAGACCCCAGGAGCGCGACAGCAGGTACGGTGCCACTGTGCTCA
ATTTCAAGCGTCAGTCCTGCCTTCAATCTTAGAGCCGCACGCCGTCAGTG
TTACTCCGATGCCCTGTCGGGCACTCAAAAGTGCAAGTGCTGCATCTGCT
ACCTCAGACAGCATGCACACCGCGCTGGTGTTGTTTCCAGCGTCTTGTAT
CGCAGCTTTACATAGAAACTGGAGTTACCCCTTTAGGTATAGAATAGGTG
CGTCTGTCTCTGGTGTCGCTCCACTATTTTGGAGGAGCTGCGTTCGCCCC
GCTGTTTAGATGTGGAACATCTCTTGGTATCAGATATGTATCTATGATGG
GTAGTATCTGCTGCGCGATTGGGCATCCTCCCCCTTTTGCTACCAGGCAT
AATCTACGCGCCACAGTCATTGTCGACTTCCGGGTGTTCGATCAGTAGCA
TTACCATCAGCACACCTAAATCAAAGCCATGCCTTGAACTTGTAGCTGCG
ATGCATGCCAGCTTACTCAACCGATCTGCCTGTTGATCCCTGCTGCTGCA
GAACCAAATCCACAATGTTTGCCGTGGCAAGAACAGCGGTGATATCTGCC
CGCGGCGCCAGGGCGGTTGCCCTGAGGAGCGGCGGCGTCGGCGCAGCCCG
GCACTACCATGAGAACATCGTCGATCACTACGAGAACCCTCGTAACGTCG
GCAGCCTGGATAAGAAGGAGCTGGATGTGGGGACTGGGCTGGTGGGGGCG
CCAGCGTGTGGCGATGTGATGAAACTGCAGATCAGGGTGAGTGCGTTGAG
TAGGCCCAAGATCTCTCCAGGGTGATCCCAGAGCAAAGCGTAGCCTGTGT
GCTGCATCAGGGAAACCGCTGCGCTCACGGCAACACCTGCACAACTGTCT
GAGTCAGCGCCGTGTTGCTGGTCAGCATAGATGCATATGCTAGACTGTCT
GAACCAAAGCAGTGTGTCCGGTCAGCATGCCTGCAGCGAGTGGCGCCACG
ATTCGTGTCACACCAAGCACCCGAGAATCTGCACTGTTGGCGGAATCGTA
GAGCCCTGTGCCTGCGCCTTCAGAGCAGTGCAATCGCGCCGCAACTTTTG
AACCTGAGCTGTATCGTTGCGGTGGCACATTGGACATGACAGATGGGGGT
ATGTAGCCCTTCTACTGTTGTCATGATATCGTCGAACGTCAACATGGGCA
CCACTGGCAACGGTTGCAAAGTCATTGTTGTACAAAACTGTGGGCACCAG
CTGGCGACAGTGTAACGGTCACGTGGTGGCAGATCCATGCCTGCTGGCTG
GCTTCACGGTGACTGTACATCAACGCCTGACTCTGACATATACTCTAAAG
CAACATCTGGGATGGAGAGTCGAAGGATGATTGCTATGTAGTCCCACATC
ATACGGGCCGTATGTCACCTCAGACATTGAATTGCTCGTCATCTGGCGGC
GGAAGGCTGCAGATGAAGTACTTGTGAACATTGATCATGCCTTCAGGGTC
TCATGTGTGCCTCAGCCCCCCTTCAGATTCACACCGGATGCATTACATTA
GGTTCAGTCACATCTGCACACTGCTCGAGAAGCTGGCCATGACCAAGTGC
CTTTGTGCTCAGCTGTCTGCGGCAACAGCTGACATCATTCTTACGCATAC
TTCTACCCTTTTCATGTTCTTTGTGGATTTCCTGCTTGCCAATGGAATCT
GCAGAGTCTTGAAATACCGCAAGTGCATTGCCGTCACAGCATCGGCATGC
TGGCTTCTGCTACTGTGACTAGTACTTCTTCAAAAGAGTGGCTGCCCAAC
TTCAAGACATCCAACAGTAACAATCGAAGCAAAAAAGTTAACATCTCCAA
TGTGGCTGGTATGTATGTACGATCAACGCAGGTCGATGAGAACGGCGTGA
TCACGGAGACCAAGTTCAAGACGTTCGGCTGCGGCAGCGCGATCGCAATC
ATACATGCCAGATGCTTGAAGCTTACCAACACCGACACTCACACGTGACG
GAGACCAACTTCAAGACATCCAATGACATCATCATTTCCCATGTGGCTGC
CATGTATGCACGCAGGTGGACGAGAACGGTGTGATCACGGAGACCAAGTT
CAAGACGTTCGGCTGCGGCAGCGCGATCGCGAGCAGCAGCGTCGCGACCG
AGTGGCTCAAGGGCAAGACTATCGACGAGTCGCTGAGCATCCGCAACACG
GACATCGCCGCGCACCTCAAGCTGCCGCCCGTCAAGCTGCACTGCAGCAT
GCTCGCGGAGGACGCGATCAAGGCGGCGGTGCGCGACTACAAGGCCAAGC
GCGCGGCGGCAGGTATGTATAGCGGTAACGTGCTTATTAGGGCAATTCTG
TATCATAGCATGCTCGCGATCAAGGCGGCGGTGCGCGACTACAAGGCCAA
GCGCGCGGCGGCAGGTATGTATAGCGGTAACATACGGTCATTGGTAGAAG
GCACTTGCGGCTAACCATCCTTGTCACCTAGAGCTCTACGATCTTTCGAT
TCGTTTTTATTCATACTTATTAGAGCATTTTCAGAGGGTTATTTCTGCAC
TTCGTCATGCTCGCGGAGGACTCAATAATGGCGGCGGTGCGCGACTTCAA
GGCCAAGTGCGCGGTGGCAGGTATGCATCAGCAGCGATGCCTACTCGTTG
ATATTACTAGCACACTTCTGGAGGTTGGTTTTCTGCCCGAGCAACGCGGC
GCTGCGCGATCACAAATCCAAGCGTGGCGGCACGTATGCATCAGCGGTGA
CACCTAGTCTGTGTTATTATCAGCACACCTTCACAGGCTGGCCTCTGTCT
GAAGAAGGGTGTGGGGGTGGTGTGGGGGTGCGCAATCATGACCAAGGCCA
GGCGTCTGGTGGCAGGCATGCATGTAGACTACATACTTTATACCTGCCGG
GGTACTTGTTAGGGCACTTTCAGATGCAGTGGCTGCCCAAGCAAGGCAGC
ACCGCGCGGCAGCAAGATGAACCGCTCAGCGGCAGGTACTCGCGCGTAGT
ACGGAGACCTACCTTTCGTGCGCGGATTGCAATTGAAGCGGGCTCTTGTG
CGCGAACTGCAGTCAAAAGCGGGTGATGTCAGCAGCGCTGCAGTGGCTGC
GTCACGCCTACAGTCAGACATCTAGCTACAAAGGGGGAAGCATTTGCTTC
TCCTGTGCTGGAATGCTTGTTCAAAGTCGGATCGCCATAGTGTCGCTTTG
AATTATAGATTTTTGTGGGATCCTGCTGCTGCCAGCAGCTGTTCAGGATC
AGGCAAACAAACCTCACGCGGTCGGATTGCTTGGTTCACATCTTGAGCTG
TCGGTTGGGATCTGCGCAGACCTCTTGCGATCCCACTGCTTGTTTCAGAT
CCCCACCGCGAACCCCTCAAGAAATGTACTGTATTCATCAGAGTCGCTCC
AAGGCACGCATCACCAGTGTTCATTGGCGCTGGGATATTCCTCATGCTCG
TCTCAATGCAAAACTGTGAAGAACTGCAACGAGTTAAGTTGTGGTCGACG
TGCGTCCCTCTGCCCTCTGAAAGAACACATCACAAGTGCTGATGCGCGGC
AATGCATGCTCGTCTCATTGCGAATCTGTGAAGAACTGCAAAGACTACAA
TTGAGGTTGACGTGCCTCCCCCTGCCCTCGTGCGGCGCAGGCGGCAGTGC
CGACGAGCCCAAGGCCGCGCAGGCTTCCGCCTGAGCGCGCGGCGCAGCAC
CGCTCGGCGCTGCCGCTCCGCCTCGACTGAGCACTGCCAGTTTTCCTCTG
CAGCAGTGGCAGCAGCGGCAGCGGCAGCAGCAGCAGCAGCAGCGGCAGCA
GCGGTGCACAGGGGCGGATTTGCGAAGGGCCCGTGTGCAGTAGCGGCAGC
GTAGCAGCAGGGCCTTGCGCCTGCCCGCGCGAGGGGCTTGTTGTACAACT
TGTACTTCAACTCGCAGTACTTGGACCTGGTACCGGCCAGCAGCCATAGC
AGCGGCGACAGCGGCGGTGGCGGCAGCGGCAGCGCAATCGGCGCTCAATG
GACGGGGCCTCACACATGTTGCGCGCACGCATGCGCGATCGGCGGGAGCG
CATTCATACAAGGGAAAGGCGCTACGAAGAACACTTTCTCCACTTCTCTG
TTGGGGAGTCGCCTGGGCAGTCGCCACTTCCCGGATGGGCAGTTGGAGTA
GAGCGTGCTAGCACTCGGCTAGGGCAGTGGCGCGCGGCGCATTCGCCGCA
CACGTTTCAGTCCATGGTTTGGCAGGCTCAGGAGCCCCCAGCTGGTTTTG
CGGTTCGCTGGTTTATTCGCGAGCCGCGCTTGTACGCTAGCACTGGCTAC
GACTCAGCTCCTGTGCCTCTCAAGATGTAGTCGGAGTGCGGGGTTGGCGG

Coding sequence (CDS) from alignment at Contig_9:1239626..1243975+

>mRNA_3619 ID=mRNA_3619|Name=jgi.p|Trimin1|347238|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=513bp|location=Sequence derived from alignment at Contig_9:1239626..1243975+ (Tribonema minus UTEX_B_3156 )
ATGTTTGCCGTGGCAAGAACAGCGGTGATATCTGCCCGCGGCGCCAGGGC
GGTTGCCCTGAGGAGCGGCGGCGTCGGCGCAGCCCGGCACTACCATGAGA
ACATCGTCGATCACTACGAGAACCCTCGTAACGTCGGCAGCCTGGATAAG
AAGGAGCTGGATGTGGGGACTGGGCTGGTGGGGGCGCCAGCGTGTGGCGA
TGTGATGAAACTGCAGATCAGGGTGGACGAGAACGGTGTGATCACGGAGA
CCAAGTTCAAGACGTTCGGCTGCGGCAGCGCGATCGCGAGCAGCAGCGTC
GCGACCGAGTGGCTCAAGGGCAAGACTATCGACGAGTCGCTGAGCATCCG
CAACACGGACATCGCCGCGCACCTCAAGCTGCCGCCCGTCAAGCTGCACT
GCAGCATGCTCGCGGAGGACGCGATCAAGGCGGCGGTGCGCGACTACAAG
GCCAAGCGCGCGGCGGCAGGCGGCAGTGCCGACGAGCCCAAGGCCGCGCA
GGCTTCCGCCTGA