Trimin1|347194|estExt_Genemark1.C_Ctg_90041 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|347194
Unique NameTrimin1|347194|estExt_Genemark1.C_Ctg_90041
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length133
Homology
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BLAST of jgi.p|Trimin1|347194 vs. uniprot
Match: A0A835YHQ5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHQ5_9STRA)

HSP 1 Score: 267 bits (683), Expect = 1.060e-90
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0 
Query:    1 MALFGAMLRPMAQAASSVALRGQKRFAGGLKIHDQNKAHVFGEVPGHHKKEGWETIWYLTLAASAVMLVFGIGQKPVTGIEHWALDEAAARNKVEAKGGTLEYGVIYSNQPAIRFRKTDAGMPEVIDDDEDE 132
            MALFGAMLRPMAQAASSVALRGQKRFAGGLKIHDQNKAHVFGEVPGHHKKEGWETIWYLTLAASAVMLVFGIGQKPVTGIEHWALDEAAARNKVEAKGGTLEYGVIYSNQPAIRFRKTDAGMPEVIDDDEDE
Sbjct:    1 MALFGAMLRPMAQAASSVALRGQKRFAGGLKIHDQNKAHVFGEVPGHHKKEGWETIWYLTLAASAVMLVFGIGQKPVTGIEHWALDEAAARNKVEAKGGTLEYGVIYSNQPAIRFRKTDAGMPEVIDDDEDE 132
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BLAST of jgi.p|Trimin1|347194 vs. uniprot
Match: A0A6T5QHA6_HETAK (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5QHA6_HETAK)

HSP 1 Score: 82.4 bits (202), Expect = 1.500e-17
Identity = 48/121 (39.67%), Postives = 72/121 (59.50%), Query Frame = 0 
Query:   15 ASSVALR--GQKRFAGGL--KIHDQNKAHVFGEVPGHHKKEGWETIWYLTLAASAVMLVFGIGQKPVTGIEHWALDEAAARNKVEAKGGTLEYGVIYSNQPAIRFRKTDAG-MPEVIDDDE 130
            AS+V  R   ++  AGG   + H Q +A+ FGE P  HK +GWET  Y+  AAS+++LV G+  KP T I+ WA +EAAAR K++  G  +EY   Y+      F   + G +P ++D++E
Sbjct:   15 ASNVTSRIGARRTMAGGPPPRSHGQLEAYAFGEGP-KHKAQGWETGTYICYAASSLLLVLGLANKPNTSIKSWAHEEAAARLKLKEAGEDIEYSTFYNKLAGYVFETDEVGAVPTLVDEEE 134
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347194 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A835YHQ5_9STRA1.060e-90100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6T5QHA6_HETAK1.500e-1739.67NADH dehydrogenase [ubiquinone] 1 beta subcomplex ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_9contigContig_9:332134..334109 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347194mRNA_3534Tribonema minus UTEX_B_3156 mRNAContig_9 331810..334465 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|347194|estExt_Genemark1.C_Ctg_90041 ID=Trimin1|347194|estExt_Genemark1.C_Ctg_90041|Name=jgi.p|Trimin1|347194|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=133bp
MALFGAMLRPMAQAASSVALRGQKRFAGGLKIHDQNKAHVFGEVPGHHKK
EGWETIWYLTLAASAVMLVFGIGQKPVTGIEHWALDEAAARNKVEAKGGT
LEYGVIYSNQPAIRFRKTDAGMPEVIDDDEDE*
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