Trimin1|346701|estExt_Genemark1.C_Ctg_40139 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|346701
Unique NameTrimin1|346701|estExt_Genemark1.C_Ctg_40139
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length301
Homology
BLAST of jgi.p|Trimin1|346701 vs. uniprot
Match: A0A836CCH9_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCH9_9STRA)

HSP 1 Score: 548 bits (1413), Expect = 1.980e-196
Identity = 300/300 (100.00%), Postives = 300/300 (100.00%), Query Frame = 0
Query:    1 MNDRLAELGSQVGTFQTNKSMMTVDNGQHSMNEFYETIKAIDDDIASIRAACKELDKLASAALFAPLEQDGASAKEAMSALLTKTNRITSHSKTLLNAIRAETTELKRDRKGITDANLRVRVNLERSTLTKFVDAAKEYENKQSRYRLQVKRKAERVIRAVKPLVTEEEMTAVFNHEDGVARVLQAAVLQSRTGIDDVLTEVQDTYKDVRRLEASIMELHRMFMDLALLVEQQGETLDNIELQVIEAGEYIRHGDKNLAVAVDTAKTVRGRQCRIWLAIAAILAAITLIIVIYIEAKPSK 300
            MNDRLAELGSQVGTFQTNKSMMTVDNGQHSMNEFYETIKAIDDDIASIRAACKELDKLASAALFAPLEQDGASAKEAMSALLTKTNRITSHSKTLLNAIRAETTELKRDRKGITDANLRVRVNLERSTLTKFVDAAKEYENKQSRYRLQVKRKAERVIRAVKPLVTEEEMTAVFNHEDGVARVLQAAVLQSRTGIDDVLTEVQDTYKDVRRLEASIMELHRMFMDLALLVEQQGETLDNIELQVIEAGEYIRHGDKNLAVAVDTAKTVRGRQCRIWLAIAAILAAITLIIVIYIEAKPSK
Sbjct:    1 MNDRLAELGSQVGTFQTNKSMMTVDNGQHSMNEFYETIKAIDDDIASIRAACKELDKLASAALFAPLEQDGASAKEAMSALLTKTNRITSHSKTLLNAIRAETTELKRDRKGITDANLRVRVNLERSTLTKFVDAAKEYENKQSRYRLQVKRKAERVIRAVKPLVTEEEMTAVFNHEDGVARVLQAAVLQSRTGIDDVLTEVQDTYKDVRRLEASIMELHRMFMDLALLVEQQGETLDNIELQVIEAGEYIRHGDKNLAVAVDTAKTVRGRQCRIWLAIAAILAAITLIIVIYIEAKPSK 300          
BLAST of jgi.p|Trimin1|346701 vs. uniprot
Match: A0A836CD59_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD59_9STRA)

HSP 1 Score: 272 bits (696), Expect = 2.400e-87
Identity = 157/282 (55.67%), Postives = 207/282 (73.40%), Query Frame = 0
Query:    1 MNDRLAEL--GSQV-GTFQTNKSMMTVDN---GQHSMNEFYETIKAIDDDIASIRAACKELDKLASAALFAPLEQDGASAKEAMSALLTKTNRITSHSKTLLNAIRAETTELKRDRKGITDANLRVRVNLERSTLTKFVDAAKEYENKQSRYRLQVKRKAERVIRAVKPLVTEEEMTAVFNHEDGVARVLQAAVLQSR---TGIDDVLTEVQDTYKDVRRLEASIMELHRMFMDLALLVEQQGETLDNIELQVIEAGEYIRHGDKNLAVAVDTAKTVRGRQC 273
            MNDRL +L  GS   G  + +   + V+    G+  M +F+E+I++I  DI +++AACK+LD L  AA+FAP+++ G +AK+ ++ +L KTN+  SH+KTLL+ +R ET  LKRD K  T+AN+RVR NLE +   KFVD AKEY+NKQ+RY+ QVK KAER ++AVKP VTE+EM AVF  +DGV RVL+AAV+Q       + +VL EVQD Y+DVRRLEASI+ELHRMFMDLALLVEQQGETLD IE QV +AG+Y+R G+ +L  A+  AK VR RQC
Sbjct:    1 MNDRLGDLRRGSNADGEVELSSVAIDVEEEAGGKDDMKKFFESIESIKADINAVKAACKQLDSLTEAAIFAPMDKGGETAKDKITEVLAKTNKHVSHAKTLLHDLRTETAALKRDPKRSTNANIRVRANLETTFTRKFVDVAKEYQNKQNRYKSQVKGKAERAVKAVKPTVTEDEMAAVFQQDDGVKRVLEAAVMQQSGDPVEVANVLAEVQDQYEDVRRLEASILELHRMFMDLALLVEQQGETLDVIEFQVKQAGDYVRQGNVSLEDAIAKAKQVRKRQC 282          
BLAST of jgi.p|Trimin1|346701 vs. uniprot
Match: A0A6H5KD48_9PHAE (t-SNARE coiled-coil homology domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KD48_9PHAE)

HSP 1 Score: 209 bits (532), Expect = 1.470e-62
Identity = 116/245 (47.35%), Postives = 164/245 (66.94%), Query Frame = 0
Query:   31 MNEFYETIKAIDDDIASIRAACKELDKLASAALFAPLEQDGASAKEAMSALLTKTNRITSHSKTLLNAIRAETTELKRDRKGITDANLRVRVNLERSTLTKFVDAAKEYENKQSRYRLQVKRKAERVIRAVKPLVTEEEMTAVFNHEDGVARVLQAAVLQSRTGID--DVLTEVQDTYKDVRRLEASIMELHRMFMDLALLVEQQGETLDNIELQVIEAGEYIRHGDKNLAVAVDTAKTVRGRQC 273
            M  F++ + A+  DI +++ AC +LD L   A         A AK  ++  +  TN   +H+K LL A+R ET  +K+D      + +RVR NL+ +   KFVD AK+Y+N+Q++Y+  VK+KAER I AVKP  TEEE+T VF  EDGV RV++AA+LQ    ++   VL EV+DTY DVRRLEASI+ELH+MFMDLALLV++QGE LD IE QV  A +Y++  + ++A A+D++K +R RQC
Sbjct:   45 MEGFFDKVNAVKKDIDAVKKACTDLDTLTQQATLTSSATVEADAKSQINTTIANTNNRVAHAKGLLQAMREETEAMKKDPSRAKPSEVRVRENLQNTLTRKFVDLAKDYQNRQNKYKTSVKKKAERQILAVKPSATEEELTTVFEQEDGVQRVMEAAILQQGDPVEVTHVLEEVKDTYHDVRRLEASILELHKMFMDLALLVDRQGEMLDQIEYQVKSASDYVKDANTDIAHAIDSSKKIRKRQC 289          
BLAST of jgi.p|Trimin1|346701 vs. uniprot
Match: A0A7S2FD15_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FD15_9STRA)

HSP 1 Score: 152 bits (384), Expect = 1.100e-40
Identity = 96/257 (37.35%), Postives = 145/257 (56.42%), Query Frame = 0
Query:   31 MNEFYETIKAIDDDIASIRAACKELDKLASAALFAPLEQDGASAKEAMSALLTKTNRITSHSKTLLNAIRAETTELKRDRKGITDANLRVRVNLERSTLTKFVDAAKEYENKQSRYRLQVKRKAERVIRAVKPLVTEEEMTAVFNHEDGVARVLQAAVLQSRTG-IDDVLTEVQDTYKDVRRLEASIMELHRMFMDLALLVEQQGETLDNIELQVIEAGEYIRHGDKNLAVAVDTAKTVRGRQCRIWLAIAAILAAI 286
            M +F+  ++A+   +  I++ACKE+  +    L A   +   S K  +S ++ KTN+I    KT+LN ++ ET  L R+         R+R NL  +   KF++  KEY+ +Q  Y+  VK+K  R ++ VK   T EE+  V     G   + ++A+L+S    + +  ++  D Y+DV RLE S+ ELH+MF+D ALL EQQGE LD IE QV  A EYI  G+ +L VA D  K++R +QC + L I  I  AI
Sbjct:   32 MQKFFADVEAVKGHLKKIKSACKEIQNINQQMLLATTSETEISQK--LSPIIDKTNKIAQRCKTILNTMKEETDTLARENDKAKANEQRIRENLVNTLTRKFMEVVKEYQKRQQDYKDDVKKKVTRQVKIVKEDATPEEIDQVMKSAGGTGAMFKSAILKSANNEVVEAYSQAADQYQDVLRLEESMQELHQMFVDFALLTEQQGELLDQIEYQVHAASEYITDGNDDLEVAGDYQKSIRKKQCCVILIILVIAIAI 286          
BLAST of jgi.p|Trimin1|346701 vs. uniprot
Match: A0A4D9D821_9STRA (t-SNARE coiled-coil homology domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D821_9STRA)

HSP 1 Score: 152 bits (383), Expect = 2.870e-40
Identity = 107/314 (34.08%), Postives = 173/314 (55.10%), Query Frame = 0
Query:    1 MNDRLAELGSQ--------VGTFQTN------------KSMMTVDNGQHSMNEFYETIKAIDDDIASIRAACKELDKLASAALFAPLEQDGASAKEAMSALLTKTNRITSHSKTLLNAIRAETTELKRDRKGITDANLRVRVNLERSTLTKFVDAAKEYENKQSRYRLQVKRKAERVIRAVKPLVTEEEMTAVFNHEDGVARVLQAAVLQ-SRTGIDDVLTEVQDTYKDVRRLEASIMELHRMFMDLALLVEQQGETLDNIELQVIEAGEYIRHGDKNLAVAVDTAKTVRGRQCRIWLAIAAILAAITLIIVIY 293
            MNDRLAEL ++        VG   T              + +T  +    MN+F+  ++A  +DI +I+ A + +  +   A  A      A   + ++A++ +TN   + +K +L+ ++ ETT+L++D +  T + LR+R NL  +   KFVD  K+Y+N Q++Y+  +K K +R ++ VKP  + EE+ AVF    G  +V+  A+L+ +   I +V   V D Y+DV  LEASI ELH+MF+D ALLVEQQGE LD IE QV  A  Y+  G   +  A+  AK  R  QC + + I  ++  + L++ ++
Sbjct:    1 MNDRLAELRAKGGGAPSDSVGVDMTRLQGRGDGAGAAPSAAVTNASQPQYMNDFFTDVEATKEDINAIKEAIRRMSGIHQEAFLATTGPREAKLSQELNAVIQETNPKAARAKKMLSKMKDETTKLRQDSR-CTPSQLRIRDNLTNTLTRKFVDVMKDYQNAQTKYKAFIKDKVQRQVQIVKPDASTEEIEAVFKSGGGGDQVITQAILKGANESIRNVYQNVADKYQDVLTLEASIAELHQMFLDFALLVEQQGEMLDQIEYQVKGAANYVEEGTLQVQGAIANAKKARKYQCCMLVCIMVLVGILILVLFVF 313          
BLAST of jgi.p|Trimin1|346701 vs. uniprot
Match: A0A067CCD7_SAPPC (t-SNARE coiled-coil homology domain-containing protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CCD7_SAPPC)

HSP 1 Score: 149 bits (377), Expect = 1.220e-39
Identity = 100/277 (36.10%), Postives = 157/277 (56.68%), Query Frame = 0
Query:    1 MNDRLAEL---GSQVGTFQTNKSMMTVDNGQHSMNEFYETIKAIDDDIASIRAACKELDKLASAALFAPLEQDGASAKEAMSALLTKTNRITSHSKTLLNAIRAETTELKRDRKGITDANLRVRVNLERSTLTKFVDAAKEYENKQSRYRLQVKRKAERVIRAVKPLVTEEEMTAVFNHEDGVARVLQAAVLQ-SRTGIDDVLTEVQDTYKDVRRLEASIMELHRMFMDLALLVEQQGETLDNIELQVIEAGEYIRHGDKNLAVAVDTAKTVRGRQC 273
            MNDRLAEL    S V    +  S  T       M +F+  ++ +  D++ I  A   + +L   AL A    +  +  + +  ++  TN+I +H+K +L  I+ E+ E K+D K +  + +R+R N+  +   KF+D  KEY+  Q +++  +K K +R ++ VKP  +E+E+  V    D  A + ++A+LQ S   I +V     D Y+DV +LE S+ ELH+MF+DLALLVEQQGE LD IE QV  A  YI  G+K +  A+ T K++R +QC
Sbjct:    1 MNDRLAELTGKSSDVMIDISEASSTTEITRPKFMEKFFLDVEDMQADLSKIGHATDRIGELNHQALLATAAGEEQTISQELCLVIDSTNKIAAHAKGMLELIKKESAEKKKD-KTVAASEIRIRDNMSTTLTRKFMDTMKEYQKAQQKFKADMKNKVKRQVQIVKPDASEQEIDMVMRSADPGA-IYRSAILQGSAESIKEVYMNCHDKYQDVLKLEQSVAELHQMFLDLALLVEQQGEMLDQIEFQVKAASNYIDAGNKEVTKAIQTQKSMRKKQC 275          
BLAST of jgi.p|Trimin1|346701 vs. uniprot
Match: A0A7S2K4X5_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K4X5_9STRA)

HSP 1 Score: 149 bits (376), Expect = 2.100e-39
Identity = 103/304 (33.88%), Postives = 166/304 (54.61%), Query Frame = 0
Query:    1 MNDRLAELGSQVGTFQTNKSMMTVDN-----------GQHSMNEFYETIKAIDDDIASIRAACKELDKLASAALFAPLEQDGASAKEAMSALLTKTNRITSHSKTLLNAIRAETTELKRDRKGITDANLRVRVNLERSTLTKFVDAAKEYENKQSRYRLQVKRKAERVIRAVKPLVTEEEMTAVFNHEDGVARVLQAAVLQSRTGIDDVL----TEVQDTYKDVRRLEASIMELHRMFMDLALLVEQQGETLDNIELQVIEAGEYIRHGDKNLAVAVDTAKTVRGRQCRIWLAIAAILAAITLI 289
            MNDRLA+L    G   T+   +TVD            G + M +F++ ++ I  DI ++R A K + ++   A+ A            +  L+  TN+   H+K LL  I+ +  E ++ +  I ++++R+R NL  +   KFVD  KEY+N Q +Y+  +K+K +R ++ VKP  T EE+ AV   E G   + +  +L   TG+ D +      V   Y+DV  LEAS+ ELH+MF D ALL EQQGE L+ IE QV  A +YI  G+ ++  +++  K++R +QC  W+ +  I+A I ++
Sbjct:    1 MNDRLADLT--YGGANTSMDDVTVDQMEAGTTTDNGAGANYMEQFFKDVETIKADIQAVRDATKVIGQINEEAVLAISTDKERDLSNRLRPLVDSTNKKAKHAKALLELIKKQN-EQEKGKGNIKNSDMRIRENLNNTLTRKFVDEMKEYQNAQQKYKSDIKKKVKRQVQIVKPDATNEEIDAVMKSEGGRDALYKDKIL---TGVADPIKNAYANVAGKYQDVLALEASVTELHQMFQDFALLTEQQGELLNQIEFQVETAADYIEEGNVDIVKSIEYQKSIRKKQC--WIIVIVIVALIVVL 296          
BLAST of jgi.p|Trimin1|346701 vs. uniprot
Match: A0A2D4CGW6_PYTIN (Syntaxin, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CGW6_PYTIN)

HSP 1 Score: 146 bits (368), Expect = 2.680e-38
Identity = 101/306 (33.01%), Postives = 172/306 (56.21%), Query Frame = 0
Query:    1 MNDRLAELGSQVGTFQTNKSMMTVDNGQHS-----MNEFYETIKAIDDDIASIRAACKELDKLASAALFAPLEQDGASAKEAMSALLTKTNRITSHSKTLLNAIRAETTELKRDRKGITDANLRVRVNLERSTLTKFVDAAKEYENKQSRYRLQVKRKAERVIRAVKPLVTEEEMTAVFNHEDGVARVLQAAVLQSRT-GIDDVLTEVQDTYKDVRRLEASIMELHRMFMDLALLVEQQGETLDNIELQVIEAGEYIRHGDKNLAVAVDTAKTVRGRQCRIWLAIAAILAAITLIIVIYIEAKPSK 300
            M DRLAE+  +     TN++ ++V           M +F++ ++ +  D+A+I    +++ +L   A+ A    +  +    ++ ++  +NR  +H+K +L A++ E+ + K+D K    + +R+R N+  +   KF+D  K+Y+  Q +Y+  +K K +R ++ VKP  +E E+ AV    D    + ++A+LQ     I DV   VQD Y+DV RLE S+ ELH+MF+DLALLVEQQGE LD IE QV  A  Y+  G++ +  A+ + K+ R ++C I      +   IT+I+VI + A   K
Sbjct:    1 MLDRLAEVTGKTSA--TNEAAVSVGRPNEVVRPKFMEQFFKDVEDMQSDLANINLGTQKIAELNQRAVLATSNTEEQAISNELTIVIETSNRHATHAKGILEALKKESADRKKD-KSTPVSEIRIRDNMCATLTKKFMDCMKDYQKAQQKYKNDMKAKVKRQVQIVKPDASEAEIDAVMRSPDP-GSIYKSAILQGPADAIRDVYLNVQDKYQDVLRLEQSVAELHQMFLDLALLVEQQGEMLDQIEFQVRTAANYVEQGNQXVVKALKSQKSARKKKCCI------LFVGITIILVIVLVAAFKK 296          
BLAST of jgi.p|Trimin1|346701 vs. uniprot
Match: B8BWQ6_THAPS (Syntaxin, epimorphin family n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BWQ6_THAPS)

HSP 1 Score: 143 bits (361), Expect = 1.330e-37
Identity = 87/247 (35.22%), Postives = 142/247 (57.49%), Query Frame = 0
Query:   31 MNEFYETIKAIDDDIASIRAACKELDKLASAALFAPLEQDGASAKEAMSALLTKTNRITSHSKTLLNAIRAETTELKRDRKGITDANLRVRVNLERSTLTKFVDAAKEYENKQSRYRLQVKRKAERVIRAVKPLVTEEEMTAVFNHEDGVARVLQAAVLQSRTGIDDVLT----EVQDTYKDVRRLEASIMELHRMFMDLALLVEQQGETLDNIELQVIEAGEYIRHGDKNLAVAVDTAKTVRGRQC 273
            M +F+  ++AI  DI+++ +A +++  L   A+ A  E + +   + +  L+  TN+     K LL  ++ E   LK ++K IT  +LRVR NL  + L KF+D  K Y+N Q +Y+  VK+K  R ++ +KP  T++E+  +   E G   + Q  +L    G++D +     +V   Y+DV  LEAS+ ELH+MF+D ALL EQQGE LD IE QV  A +Y+   + ++  A++  K +R +QC
Sbjct:    1 MKQFFNDVEAIKLDISTVTSATEQITSLKDKAVLATSETEESQISDTIRTLVESTNKRAKTCKNLLGLLKQENANLK-EKKEITATDLRVRENLVNTLLRKFIDEMKRYQNSQQQYKTDVKKKVTRQVQMIKPDATDQEVDDIMRSEGGREALYQQQILSG--GVNDQIKTQYRQVAGKYQDVLTLEASVAELHQMFLDFALLTEQQGELLDQIEYQVRSAADYVEDANVDVYEAIEYQKKIRKKQC 244          
BLAST of jgi.p|Trimin1|346701 vs. uniprot
Match: A0A024TGB6_9STRA (t-SNARE coiled-coil homology domain-containing protein n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A024TGB6_9STRA)

HSP 1 Score: 139 bits (351), Expect = 8.730e-36
Identity = 96/276 (34.78%), Postives = 154/276 (55.80%), Query Frame = 0
Query:    1 MNDRLAEL-GSQVGTFQTNKSMMTVDNGQHS-MNEFYETIKAIDDDIASIRAACKELDKLASAALFAPLEQDGASAKEAMSALLTKTNRITSHSKTLLNAIRAETTELKRDRKGITDANLRVRVNLERSTLTKFVDAAKEYENKQSRYRLQVKRKAERVIRAVKPLVTEEEMTAVFNHEDGVARVLQAAVLQ-SRTGIDDVLTEVQDTYKDVRRLEASIMELHRMFMDLALLVEQQGETLDNIELQVIEAGEYIRHGDKNLAVAVDTAKTVRGRQC 273
            M+DRLAEL G   G    + +    +  +   M +F+  ++ +  D+  I  A   + +L   AL A    +     + +  ++  TN++ + +K LL  I+ ET E K+D K +  + +R+R N+  +   KF+D  KEY+  Q R++  +K K +R ++ VKP  +E+E+  V    D  A + ++A+LQ S   I +V     D Y+DV +LE S+ ELH+MF+DLALLVEQQGE LD IE QV  A  YI  G+K +  A+ + K++R + C
Sbjct:    1 MHDRLAELTGKAPGEVAIDVAAENPNVARPKFMEKFFLDVEDMQADLGKITVATDRIGELNHQALLATATGEEQIISQELCLVIDSTNKVAARAKALLELIKKETAEKKKD-KVVPASEMRIRDNMSTTLTRKFMDTMKEYQKAQQRFKSDMKNKVKRQVQIVKPDASEQEIDMVMRSADPGA-IYRSAILQGSNDSIKEVYMTCHDKYQDVLKLEQSVAELHQMFLDLALLVEQQGEMLDQIEFQVKTASNYIDAGNKEVTKALKSQKSMRKKMC 274          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|346701 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CCH9_9STRA1.980e-196100.00Soluble NSF attachment protein receptor n=1 Tax=Tr... [more]
A0A836CD59_9STRA2.400e-8755.67Soluble NSF attachment protein receptor n=1 Tax=Tr... [more]
A0A6H5KD48_9PHAE1.470e-6247.35t-SNARE coiled-coil homology domain-containing pro... [more]
A0A7S2FD15_9STRA1.100e-4037.35Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A4D9D821_9STRA2.870e-4034.08t-SNARE coiled-coil homology domain-containing pro... [more]
A0A067CCD7_SAPPC1.220e-3936.10t-SNARE coiled-coil homology domain-containing pro... [more]
A0A7S2K4X5_9STRA2.100e-3933.88Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A2D4CGW6_PYTIN2.680e-3833.01Syntaxin, putative n=1 Tax=Pythium insidiosum TaxI... [more]
B8BWQ6_THAPS1.330e-3735.22Syntaxin, epimorphin family n=1 Tax=Thalassiosira ... [more]
A0A024TGB6_9STRA8.730e-3634.78t-SNARE coiled-coil homology domain-containing pro... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 136..156
NoneNo IPR availableGENE3D1.20.58.70coord: 27..158
e-value: 5.3E-16
score: 60.6
NoneNo IPR availableGENE3D1.20.5.110coord: 192..295
e-value: 5.2E-22
score: 79.5
NoneNo IPR availableCDDcd15848SNARE_syntaxin1-likecoord: 198..259
e-value: 9.04732E-22
score: 84.5097
IPR000727Target SNARE coiled-coil homology domainSMARTSM00397tSNARE_6coord: 194..261
e-value: 4.3E-12
score: 56.2
IPR000727Target SNARE coiled-coil homology domainPROSITEPS50192T_SNAREcoord: 199..261
score: 15.835307
IPR006011Syntaxin, N-terminal domainPFAMPF00804Syntaxincoord: 33..234
e-value: 2.1E-24
score: 86.3
IPR045242SyntaxinPANTHERPTHR19957SYNTAXINcoord: 21..288
IPR028671Syntaxin-2PANTHERPTHR19957:SF36SYNTAXIN-2coord: 21..288
IPR010989SNARESUPERFAMILY47661t-snare proteinscoord: 29..254

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_4contigContig_4:1283781..1286190 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|346701mRNA_1673Tribonema minus UTEX_B_3156 mRNAContig_4 1283781..1286359 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|346701|estExt_Genemark1.C_Ctg_40139 ID=Trimin1|346701|estExt_Genemark1.C_Ctg_40139|Name=jgi.p|Trimin1|346701|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=301bp
MNDRLAELGSQVGTFQTNKSMMTVDNGQHSMNEFYETIKAIDDDIASIRA
ACKELDKLASAALFAPLEQDGASAKEAMSALLTKTNRITSHSKTLLNAIR
AETTELKRDRKGITDANLRVRVNLERSTLTKFVDAAKEYENKQSRYRLQV
KRKAERVIRAVKPLVTEEEMTAVFNHEDGVARVLQAAVLQSRTGIDDVLT
EVQDTYKDVRRLEASIMELHRMFMDLALLVEQQGETLDNIELQVIEAGEY
IRHGDKNLAVAVDTAKTVRGRQCRIWLAIAAILAAITLIIVIYIEAKPSK
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000727T_SNARE_dom
IPR006011Syntaxin_N
IPR045242Syntaxin
IPR028671STX2
IPR010989SNARE