Trimin1|346420|estExt_Genemark1.C_Ctg_10207 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|346420
Unique NameTrimin1|346420|estExt_Genemark1.C_Ctg_10207
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length214
Homology
BLAST of jgi.p|Trimin1|346420 vs. uniprot
Match: A0A836CPQ4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPQ4_9STRA)

HSP 1 Score: 435 bits (1118), Expect = 2.280e-154
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0
Query:    1 MISRCCVLALLFVGGAAAYSLRGLQEKEQHGRNLAPKLCLKEWKKCKADVVCNNCLENGNVPEKPQLKGASCNTVDKWWAQIDFTGLANCDDYEIGKSKLSLLLYCRYDSYSAEAKLKCEVDESAAPSMVPTTMPFMYATDAPAGATDAPTAGPTVEVTAQETLAEGPCGICGAGCGCKPGIDGCQCGPEFPGYKPPAAGGAAAGASSTSAAP 213
            MISRCCVLALLFVGGAAAYSLRGLQEKEQHGRNLAPKLCLKEWKKCKADVVCNNCLENGNVPEKPQLKGASCNTVDKWWAQIDFTGLANCDDYEIGKSKLSLLLYCRYDSYSAEAKLKCEVDESAAPSMVPTTMPFMYATDAPAGATDAPTAGPTVEVTAQETLAEGPCGICGAGCGCKPGIDGCQCGPEFPGYKPPAAGGAAAGASSTSAAP
Sbjct:    1 MISRCCVLALLFVGGAAAYSLRGLQEKEQHGRNLAPKLCLKEWKKCKADVVCNNCLENGNVPEKPQLKGASCNTVDKWWAQIDFTGLANCDDYEIGKSKLSLLLYCRYDSYSAEAKLKCEVDESAAPSMVPTTMPFMYATDAPAGATDAPTAGPTVEVTAQETLAEGPCGICGAGCGCKPGIDGCQCGPEFPGYKPPAAGGAAAGASSTSAAP 213          
BLAST of jgi.p|Trimin1|346420 vs. uniprot
Match: A0A835YPP1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPP1_9STRA)

HSP 1 Score: 222 bits (565), Expect = 1.570e-69
Identity = 110/165 (66.67%), Postives = 125/165 (75.76%), Query Frame = 0
Query:    4 RCCVLALLFVGGAAAYSLRGLQEKEQHGRNLAPKLCLKEWKKCKADVVCNNCLENGNVPEKPQLKGASCNTVDKWWAQIDFTGLANCDDYEIGKSKLSLLLYCRYDSYSAEAKLKCEVDE---SAAPSMVPTTMPFMYATDAPAGATDAPTAGPTVEVTAQETLA 165
            RCC + L    GAA +SLRG +++EQHGR LAPKLCLKEWK CKAD +CNNCLENGNVPEKP++  A+C TVDKWW QI F G+A CDDY+IGKSKLS LLYCRYDSY+AEAK+KCE+     S APSM    MPF YATDAPA      T GPTVE +A  TLA
Sbjct:    5 RCCAV-LALAAGAAGFSLRGAEQQEQHGRKLAPKLCLKEWKACKADAICNNCLENGNVPEKPKIDNATCATVDKWWDQIAFKGIAGCDDYDIGKSKLSKLLYCRYDSYAAEAKIKCELGSIAPSTAPSMXXXXMPFQYATDAPAA-----TVGPTVEGSAGGTLA 163          
BLAST of jgi.p|Trimin1|346420 vs. uniprot
Match: A0A836CNI0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNI0_9STRA)

HSP 1 Score: 208 bits (530), Expect = 6.900e-65
Identity = 115/215 (53.49%), Postives = 137/215 (63.72%), Query Frame = 0
Query:    3 SRCCVLALLFVGGAAAYSLRGLQEKEQHGRNLAPKLCLKEWKKCKADVVCNNCLENGNVPEKPQLKGASCNTVDKWWAQIDFTGLANCDDYEIGKSKLSLLLYCRYDSYSAEAKLKCEVDESAAPSMVPTT--------MPFMYATDAPAGA-------TDAPTAGPTVEVTAQETLAEGPCGICGAGCGCKPGIDGCQCGPEFPGYKPPAAGGA 202
            +R CVLALLFV GAAA+SL G ++  QH R L P LC KEWK CKAD VCNNCL+NGNVP+KP++KGA+C+T DKWW ++DFTG+  C  ++ GKS LSLLLYCR+DSY+ EA +KCEV  + APS             MP ++A  AP          T AP    T   T   T A+GPCGICGAGCGCKPG          PGYK P  G A
Sbjct:    2 ARYCVLALLFVSGAAAFSLHGYEK--QH-RELIPALCQKEWKHCKADAVCNNCLKNGNVPQKPKIKGATCHTFDKWWYELDFTGVPGCATFDQGKSLLSLLLYCRFDSYAEEAGVKCEV-ATFAPSAXXXXXXXXXXXXMPLLFADGAPGAEPKPPGMKTKAPAEHATPAPTVAVTNAKGPCGICGAGCGCKPGFAXXXXXXXXPGYKAPVGGAA 212          
BLAST of jgi.p|Trimin1|346420 vs. uniprot
Match: A0A836CPS2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPS2_9STRA)

HSP 1 Score: 194 bits (494), Expect = 1.210e-53
Identity = 121/253 (47.83%), Postives = 142/253 (56.13%), Query Frame = 0
Query:    5 CCVLALLFVGGAAAYSLRGLQEK---EQH-GRNLAPKLCLKEWKKCKADVVCNNCLENGNVPEKPQLKG--ASCNTVDKWWAQIDFTGLANCDDYEIGKSKLSLLLYCRYDSYSAEAKLKCEV-DESAAPSMVPT----TMPFMYATD----------APAG---ATDAP------------------------------------TAGPTVEVTAQETLAEGPCGICGAGCGCKPGIDGCQCGPEFPGYKPP 197
            CC+L  LF GGAAA SLRG ++    EQH  R L PKLC+ EW  CKA+ +CNNCLE G++PEKP LKG  A+C+TVDKWWAQI    +  C  ++ GK+ LSLLLYCRYDSY+AEAKLKC+V D SAAPS        TMPF++A +           P G    T AP                                    T  P V   A   + EG CG CG GCGC  G+DGCQCGPEFPGY PP
Sbjct:    4 CCLL--LFAGGAAAVSLRGYEKGARVEQHIQRKLPPKLCVAEWTDCKANAICNNCLEKGDIPEKPTLKGPTATCDTVDKWWAQIALDDVPGCAKWDEGKTLLSLLLYCRYDSYAAEAKLKCDVADGSAAPSXXXXXXXXTMPFVFAPEDETPPPKLPVGPVGKPAVTAAPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAGTQPPAVGTEAPAGV-EGACGFCGVGCGCVDGVDGCQCGPEFPGYVPP 253          
BLAST of jgi.p|Trimin1|346420 vs. uniprot
Match: A0A836CLS7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLS7_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 6.370e-11
Identity = 32/82 (39.02%), Postives = 51/82 (62.20%), Query Frame = 0
Query:   38 LCLKEWKKCKADVVCNNCLENGNVPEKPQLKGASCNTVDKWWAQIDFTGLANCDDYEIGKSKLSLLLYCRYDSYSAEAKLKC 119
            +CL++   C+AD  C+ C+++G +P +P     +C  + KW A + F   A C  +  G +KLS L+YCR+D+Y+ EA LKC
Sbjct:   38 VCLQQTAACEADPTCSACVQSGTIPPRP-ADVTACVDLQKWLAAVSFPQPAKCK-FLFGGTKLSDLIYCRFDTYAEEAGLKC 117          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|346420 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A836CPQ4_9STRA2.280e-154100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YPP1_9STRA1.570e-6966.67Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CNI0_9STRA6.900e-6553.49Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CPS2_9STRA1.210e-5347.83Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CLS7_9STRA6.370e-1139.02Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_1contigContig_1:1324574..1327900 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|346420mRNA_1113Tribonema minus UTEX_B_3156 mRNAContig_1 1324574..1328353 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|346420|estExt_Genemark1.C_Ctg_10207 ID=Trimin1|346420|estExt_Genemark1.C_Ctg_10207|Name=jgi.p|Trimin1|346420|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=214bp
MISRCCVLALLFVGGAAAYSLRGLQEKEQHGRNLAPKLCLKEWKKCKADV
VCNNCLENGNVPEKPQLKGASCNTVDKWWAQIDFTGLANCDDYEIGKSKL
SLLLYCRYDSYSAEAKLKCEVDESAAPSMVPTTMPFMYATDAPAGATDAP
TAGPTVEVTAQETLAEGPCGICGAGCGCKPGIDGCQCGPEFPGYKPPAAG
GAAAGASSTSAAP*
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