Trimin1|339759|MIX48522_98_26 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|339759
Unique Name	Trimin1\|339759\|MIX48522_98_26
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	1577

Homology

[Close]

BLAST of jgi.p|Trimin1|339759 vs. uniprot
Match: A0A835YR52_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR52_9STRA)

HSP 1 Score: 454 bits (1169), Expect = 1.370e-130
Identity = 334/334 (100.00%), Postives = 334/334 (100.00%), Query Frame = 0

Query:    1 MSVPGGARPKALKGIALARLRSALSAALHMAYSGRVMTHMAESRGGGHMEEDVGEDPEMPFGXXXXXXXXXXXXXXXXXXXXXXXXXLPHGLMAAPSDALQRQADSGNWPPPPCRRSGRALNDSDSTRAHDSESKTGSATGNNGARGVAEPVPAAAVTFCCNQHDLVAPDAYIEDHPACTPHLAPALAGPAARRLQAAAHGRAHHPKANITADAHPHCRPYXXXXXXXXXXXXWPADKNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGPNAAGAPLPTLIRTPTRAHGRPDVAVGPHASLPAGAPMP 334
            MSVPGGARPKALKGIALARLRSALSAALHMAYSGRVMTHMAESRGGGHMEEDVGEDPEMPFGXXXXXXXXXXXXXXXXXXXXXXXXXLPHGLMAAPSDALQRQADSGNWPPPPCRRSGRALNDSDSTRAHDSESKTGSATGNNGARGVAEPVPAAAVTFCCNQHDLVAPDAYIEDHPACTPHLAPALAGPAARRLQAAAHGRAHHPKANITADAHPHCRPYXXXXXXXXXXXXWPADKNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGPNAAGAPLPTLIRTPTRAHGRPDVAVGPHASLPAGAPMP
Sbjct:    1 MSVPGGARPKALKGIALARLRSALSAALHMAYSGRVMTHMAESRGGGHMEEDVGEDPEMPFGXXXXXXXXXXXXXXXXXXXXXXXXXLPHGLMAAPSDALQRQADSGNWPPPPCRRSGRALNDSDSTRAHDSESKTGSATGNNGARGVAEPVPAAAVTFCCNQHDLVAPDAYIEDHPACTPHLAPALAGPAARRLQAAAHGRAHHPKANITADAHPHCRPYXXXXXXXXXXXXWPADKNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGPNAAGAPLPTLIRTPTRAHGRPDVAVGPHASLPAGAPMP 334

[Close]

BLAST of jgi.p|Trimin1|339759 vs. uniprot
Match: A0A835YGB0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGB0_9STRA)

HSP 1 Score: 137 bits (345), Expect = 8.370e-32
Identity = 78/112 (69.64%), Postives = 82/112 (73.21%), Query Frame = 0

Query:   88 LPHGLMAAPSDALQRQADSGNWPPPPCRRSGRALNDSDSTRAHDSESKTGSATGNNGARGVAEPVPAAAVTFCCNQHDLVAPDAYIEDHPACTPHLAPALAGPAARRLQAAA 199
            LPH LMAAP DALQ QADSG WPPPPCR   R L    STR  +S+           ARG AEP  A+AV FCCNQHDLVAPDAYIE+HPACTPHLAPALAGPAARRLQA A
Sbjct:   26 LPHSLMAAPLDALQLQADSGGWPPPPCRHGSRRLY---STRGRESDXXXXXXXXXX-ARGAAEPA-ASAVMFCCNQHDLVAPDAYIENHPACTPHLAPALAGPAARRLQAEA 132

[Close]

BLAST of jgi.p|Trimin1|339759 vs. uniprot
Match: A0A836CA07_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA07_9STRA)

HSP 1 Score: 122 bits (305), Expect = 3.010e-29
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0

Query:    1 MSVPGGARPKALKGIALARLRSALSAALHMAYSGRVMTHMAESRGGGHMEEDVGEDPEMPFG 62
            MSVPGGARPKALKGIALARLRSALSAALHMAYSGRVMTHMAESRGGGHMEEDVGEDPEMPFG
Sbjct:    1 MSVPGGARPKALKGIALARLRSALSAALHMAYSGRVMTHMAESRGGGHMEEDVGEDPEMPFG 62

[Close]

BLAST of jgi.p|Trimin1|339759 vs. uniprot
Match: A0A835YPL5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPL5_9STRA)

HSP 1 Score: 122 bits (305), Expect = 7.020e-29
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0

Query:    1 MSVPGGARPKALKGIALARLRSALSAALHMAYSGRVMTHMAESRGGGHMEEDVGEDPEMPFG 62
            MSVPGGARPKALKGIALARLRSALSAALHMAYSGRVMTHMAESRGGGHMEEDVGEDPEMPFG
Sbjct:   38 MSVPGGARPKALKGIALARLRSALSAALHMAYSGRVMTHMAESRGGGHMEEDVGEDPEMPFG 99

[Close]

BLAST of jgi.p|Trimin1|339759 vs. uniprot
Match: A0A835YTE7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTE7_9STRA)

HSP 1 Score: 122 bits (305), Expect = 1.770e-28
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0

Query:    1 MSVPGGARPKALKGIALARLRSALSAALHMAYSGRVMTHMAESRGGGHMEEDVGEDPEMPFG 62
            MSVPGGARPKALKGIALARLRSALSAALHMAYSGRVMTHMAESRGGGHMEEDVGEDPEMPFG
Sbjct:   68 MSVPGGARPKALKGIALARLRSALSAALHMAYSGRVMTHMAESRGGGHMEEDVGEDPEMPFG 129

[Close]

BLAST of jgi.p|Trimin1|339759 vs. uniprot
Match: A0A836CHB9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHB9_9STRA)

HSP 1 Score: 122 bits (305), Expect = 2.190e-28
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0

Query:    1 MSVPGGARPKALKGIALARLRSALSAALHMAYSGRVMTHMAESRGGGHMEEDVGEDPEMPFG 62
            MSVPGGARPKALKGIALARLRSALSAALHMAYSGRVMTHMAESRGGGHMEEDVGEDPEMPFG
Sbjct:   75 MSVPGGARPKALKGIALARLRSALSAALHMAYSGRVMTHMAESRGGGHMEEDVGEDPEMPFG 136

[Close]

BLAST of jgi.p|Trimin1|339759 vs. uniprot
Match: A0A835YZS8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZS8_9STRA)

HSP 1 Score: 119 bits (299), Expect = 3.880e-28
Identity = 61/62 (98.39%), Postives = 61/62 (98.39%), Query Frame = 0

Query:    1 MSVPGGARPKALKGIALARLRSALSAALHMAYSGRVMTHMAESRGGGHMEEDVGEDPEMPFG 62
            MSVPGGARPKALKGIALARLRSALSAALHMAYSGRVMTH AESRGGGHMEEDVGEDPEMPFG
Sbjct:    1 MSVPGGARPKALKGIALARLRSALSAALHMAYSGRVMTHTAESRGGGHMEEDVGEDPEMPFG 62

[Close]

BLAST of jgi.p|Trimin1|339759 vs. uniprot
Match: A0A835ZJ73_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJ73_9STRA)

HSP 1 Score: 120 bits (301), Expect = 3.980e-28
Identity = 61/62 (98.39%), Postives = 62/62 (100.00%), Query Frame = 0

Query:    1 MSVPGGARPKALKGIALARLRSALSAALHMAYSGRVMTHMAESRGGGHMEEDVGEDPEMPFG 62
            MSVPGGARPKALKGIALARLRSALSAALHMAYSGRV+THMAESRGGGHMEEDVGEDPEMPFG
Sbjct:   54 MSVPGGARPKALKGIALARLRSALSAALHMAYSGRVITHMAESRGGGHMEEDVGEDPEMPFG 115

[Close]

BLAST of jgi.p|Trimin1|339759 vs. uniprot
Match: A0A836CIJ9_9STRA (Uncharacterized protein n=3 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIJ9_9STRA)

HSP 1 Score: 120 bits (300), Expect = 4.650e-28
Identity = 61/62 (98.39%), Postives = 61/62 (98.39%), Query Frame = 0

Query:    1 MSVPGGARPKALKGIALARLRSALSAALHMAYSGRVMTHMAESRGGGHMEEDVGEDPEMPFG 62
            MSVPGGARPKALKGIALARLRS LSAALHMAYSGRVMTHMAESRGGGHMEEDVGEDPEMPFG
Sbjct:   49 MSVPGGARPKALKGIALARLRSELSAALHMAYSGRVMTHMAESRGGGHMEEDVGEDPEMPFG 110

[Close]

BLAST of jgi.p|Trimin1|339759 vs. uniprot
Match: A0A835YQS6_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQS6_9STRA)

HSP 1 Score: 122 bits (305), Expect = 5.720e-28
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0

Query:    1 MSVPGGARPKALKGIALARLRSALSAALHMAYSGRVMTHMAESRGGGHMEEDVGEDPEMPFG 62
            MSVPGGARPKALKGIALARLRSALSAALHMAYSGRVMTHMAESRGGGHMEEDVGEDPEMPFG
Sbjct:  107 MSVPGGARPKALKGIALARLRSALSAALHMAYSGRVMTHMAESRGGGHMEEDVGEDPEMPFG 168

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|339759 vs. uniprot

BLAST of jgi.p|Trimin1|339759 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835YR52_9STRA	1.370e-130	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YGB0_9STRA	8.370e-32	69.64	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CA07_9STRA	3.010e-29	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YPL5_9STRA	7.020e-29	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YTE7_9STRA	1.770e-28	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CHB9_9STRA	2.190e-28	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YZS8_9STRA	3.880e-28	98.39	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835ZJ73_9STRA	3.980e-28	98.39	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CIJ9_9STRA	4.650e-28	98.39	Uncharacterized protein n=3 Tax=Tribonema minus Ta...	[more]
A0A835YQS6_9STRA	5.720e-28	100.00	Uncharacterized protein n=2 Tax=Tribonema minus Ta...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006970	PT repeat	PFAM	PF04886	PT	coord: 903..938 e-value: 3.5E-8 score: 32.8 coord: 999..1033 e-value: 2.7E-7 score: 30.0 coord: 825..857 e-value: 7.5E-8 score: 31.8 coord: 1402..1437 e-value: 1.0E-6 score: 28.2 coord: 1309..1344 e-value: 8.3E-7 score: 28.5 coord: 1187..1222 e-value: 8.8E-9 score: 34.8 coord: 653..687 e-value: 8.5E-8 score: 31.6 coord: 1220..1254 e-value: 1.1E-6 score: 28.1 coord: 1151..1186 e-value: 5.7E-8 score: 32.2 coord: 967..1002 e-value: 6.5E-10 score: 38.4 coord: 1244..1279 e-value: 2.6E-9 score: 36.5 coord: 939..974 e-value: 6.9E-8 score: 31.9 coord: 1329..1364 e-value: 1.4E-6 score: 27.7 coord: 549..584 e-value: 8.0E-8 score: 31.7 coord: 1272..1307 e-value: 4.1E-9 score: 35.8 coord: 1369..1403 e-value: 6.1E-7 score: 28.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1556..1570
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1296..1338
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 765..782
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 102..147
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1528..1576
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 285..866
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 44..70
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 340..394
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1215..1253
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 529..558
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 649..666
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1393..1474
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1528..1555
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 897..1494
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1107..1132
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1051..1076
None	No IPR available	PANTHER	PTHR44826	FAMILY NOT NAMED	coord: 889..1072 coord: 1297..1475
None	No IPR available	PANTHER	PTHR44826:SF3	PE REPEAT FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G13630)	coord: 680..870
None	No IPR available	PANTHER	PTHR44826:SF3	PE REPEAT FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G13630)	coord: 1035..1196 coord: 889..1072 coord: 1297..1475 coord: 211..507 coord: 1170..1338 coord: 498..691
None	No IPR available	PANTHER	PTHR44826:SF3	PE REPEAT FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G13630)	coord: 326..622
None	No IPR available	PANTHER	PTHR44826	FAMILY NOT NAMED	coord: 326..622 coord: 211..507 coord: 1170..1338 coord: 498..691
None	No IPR available	PANTHER	PTHR44826	FAMILY NOT NAMED	coord: 680..870
None	No IPR available	PANTHER	PTHR44826	FAMILY NOT NAMED	coord: 1035..1196

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_98	contig	Contig_98:475197..498683 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|339759	mRNA_14933	Tribonema minus UTEX_B_3156	mRNA	Contig_98 474468..498683 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|339759|MIX48522_98_26 ID=Trimin1|339759|MIX48522_98_26|Name=jgi.p|Trimin1|339759|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1577bp
MSVPGGARPKALKGIALARLRSALSAALHMAYSGRVMTHMAESRGGGHME
EDVGEDPEMPFGGGGPPPPTTTGIIMVAKRAALLLLLLPHGLMAAPSDAL
QRQADSGNWPPPPCRRSGRALNDSDSTRAHDSESKTGSATGNNGARGVAE
PVPAAAVTFCCNQHDLVAPDAYIEDHPACTPHLAPALAGPAARRLQAAAH
GRAHHPKANITADAHPHCRPYAQPHRHPHTHPHWPADKNAHWPADPPAHA
DAHRRAYPNAHCRAYSHAYRSAHARSNGTADAVTDGTAYSGTNGGPNAAG
APLPTLIRTPTRAHGRPDVAVGPHASLPAGAPMPQPTSEPTAEPSAESTA
EPSAEPTAEPSAEPTSRPTTAKPTAEPTAEPTTAEPTSKPTAEPTAEPTA
EPTAEPTAEPMAEPTAEPTAEPTAKPTAEPTAEPTAKPTAEPTAEPTAEP
TAEPTAEPTSKPTAEPTAKPTAEPTAEPTAKPTAEPTAEPTAEPTFKPTA
EPTAKPTAEPTAEPTAEPTAEPTAHPTHEPTAKPTSEPTAHPTHEPTAEP
TSEPTAHPTHEPTAKPTAEPTAKPTAAPTAEPTAKPTAEPTAEPTAEPTA
KPTAEPTSKPTAEPTAEPTAEPTAHPTHEPTAEPTAEPTAEPTAHPTAEP
TAEPTSEPTSKPTAEPTAEPTAEPTAKPTAEPTAEPTAEPTAHPTHEPTA
EPTAEPTAEPTAKPTAEPTAHPTHEPTAEPTAKPTAEPTAEPTAEPTAKP
TAEPTAVPTAKPTAEPTAEPTSEPTSKPTAEPTAEPTAEPTAKPTAEPTA
EPIAKPTAEPTAEPTAEPTAHPTHEPTAEPTSEPTAHPTHEPTAEPTAEP
TAVPTAELRFGAEAGLAKRQILIARSMSLARELTARMTACTHAAQVLGCV
AAPPTAEPTAKPTAEPTSKPTAEPTAEPTAEPTAEPTAEPTAEPTAHPTH
EPTAKPTAEPTAEPTAEPTAEPTAHPTHEPTAEPTAEPTAHPTHEPTAEP
TAEPTAHPTHEPTAEPTAEPTAEPTSEPTAEPTAKPTAEPTAEPTAEPTA
KPTAEPTSKPTAEPTAEPTSEPTAKPTAEPTAEPTAEPTSEPTAEPTAHP
THEPTAKPTAEPTSEPTAEPTAEPTSKPTAEPTAKPTAEPTAHPTHEPTA
EPTAEPTAHPTHEPTAEPTAEPTAEPTAEPTAEPTAEPTAEPTAHPTHVP
TAEPTAEPTAEPTAEPTARPTTAEPTAKPTAEPTSEPTAEPTAEPTSEPT
AHPTHEPTAKPTAEPTAEPTAEPTAEPTAHPTHEPTAEPTAEPTAEPTAE
PTSRPTTAEPTAKPTAEPTSEPTAEPTSEPTSEPTAHPTHEPTAEPTAEP
TAEPTAEPTAEPTAHPTHEPTAEPTAEPTAEPTAEPTAEPTAKPTAEPTS
EPTTAEPTAHPTHEPTAEPTSKPTADPTATPSAQPTANPTAEPTSKPTTA
DPTAVPTAKPTAVPTATPTAQVSNGDAHRGADHRQADCGAYGYANGNAYG
HSDNCNAYRHADHRDAYRCPNRAELVVSAQPTTAKPTAAPTTAKPTATPT
AVPTAVPTAVPTPVPTPVPTKQNGKP*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR006970	PT