Trimin1|339728|MIX48491_36_51 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|339728
Unique Name	Trimin1\|339728\|MIX48491_36_51
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	662

Homology

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BLAST of jgi.p|Trimin1|339728 vs. uniprot
Match: A0A835YJG6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJG6_9STRA)

HSP 1 Score: 926 bits (2394), Expect = 0.000e+0
Identity = 661/661 (100.00%), Postives = 661/661 (100.00%), Query Frame = 0

Query:    1 MPAFQDVLCEAALRNLGIPLNNKKGRQKPRRSSSGGDAFDYFGLFRLSLSSSCGTWHGDVNTSSHGXXXXXXXXXXXXXXXXXXXXXXXLTAASAPSTAAACACDYPCRSGHCPPALNPNAAAPPPLAAAAPARTVTVAGDCLRFEHLESKCSLALALRASGLAHMSPETVCLRWDEALPPAAAARVARAAPWVLKRDGGSGGHDVFVVTRAADADALIAAAAALQAALPFHAERAAIPGWALQRHVDAPLLVRGGRKFHARVYALALDGSVRDDCXXXXXXXXXXXXXXXXXXXGXXECGSDGXXXECGSGTSGNGDATAAVTGTESVSIGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVFYVHDRVEVRVAAQRFDASDFTARAAHITNGAGGSDTARLLARNVLELADEEPRLRAFVADIMRRVLLPXXXXXXXXXGSGGSCDGGSSGDEGCDSXXXXXXXXXXXXXXXXXXXXXXXXXXXSSXXGCVGGXXXXXXXXXXXSCQRATSSCGSGMNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGCCRCARASAGAAPGAGSTARQRSFALLAFDVMLDSARRPWLLEVNHNPAVPSREVLAGEGECGDAFWEHLVGLCQDIIEVTALEVGGAPARAEREHAGFGAALHCH 661
            MPAFQDVLCEAALRNLGIPLNNKKGRQKPRRSSSGGDAFDYFGLFRLSLSSSCGTWHGDVNTSSHGXXXXXXXXXXXXXXXXXXXXXXXLTAASAPSTAAACACDYPCRSGHCPPALNPNAAAPPPLAAAAPARTVTVAGDCLRFEHLESKCSLALALRASGLAHMSPETVCLRWDEALPPAAAARVARAAPWVLKRDGGSGGHDVFVVTRAADADALIAAAAALQAALPFHAERAAIPGWALQRHVDAPLLVRGGRKFHARVYALALDGSVRDDCXXXXXXXXXXXXXXXXXXXGXXECGSDGXXXECGSGTSGNGDATAAVTGTESVSIGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVFYVHDRVEVRVAAQRFDASDFTARAAHITNGAGGSDTARLLARNVLELADEEPRLRAFVADIMRRVLLPXXXXXXXXXGSGGSCDGGSSGDEGCDSXXXXXXXXXXXXXXXXXXXXXXXXXXXSSXXGCVGGXXXXXXXXXXXSCQRATSSCGSGMNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGCCRCARASAGAAPGAGSTARQRSFALLAFDVMLDSARRPWLLEVNHNPAVPSREVLAGEGECGDAFWEHLVGLCQDIIEVTALEVGGAPARAEREHAGFGAALHCH
Sbjct:    1 MPAFQDVLCEAALRNLGIPLNNKKGRQKPRRSSSGGDAFDYFGLFRLSLSSSCGTWHGDVNTSSHGXXXXXXXXXXXXXXXXXXXXXXXLTAASAPSTAAACACDYPCRSGHCPPALNPNAAAPPPLAAAAPARTVTVAGDCLRFEHLESKCSLALALRASGLAHMSPETVCLRWDEALPPAAAARVARAAPWVLKRDGGSGGHDVFVVTRAADADALIAAAAALQAALPFHAERAAIPGWALQRHVDAPLLVRGGRKFHARVYALALDGSVRDDCXXXXXXXXXXXXXXXXXXXGXXECGSDGXXXECGSGTSGNGDATAAVTGTESVSIGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVFYVHDRVEVRVAAQRFDASDFTARAAHITNGAGGSDTARLLARNVLELADEEPRLRAFVADIMRRVLLPXXXXXXXXXGSGGSCDGGSSGDEGCDSXXXXXXXXXXXXXXXXXXXXXXXXXXXSSXXGCVGGXXXXXXXXXXXSCQRATSSCGSGMNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGCCRCARASAGAAPGAGSTARQRSFALLAFDVMLDSARRPWLLEVNHNPAVPSREVLAGEGECGDAFWEHLVGLCQDIIEVTALEVGGAPARAEREHAGFGAALHCH 661

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BLAST of jgi.p|Trimin1|339728 vs. uniprot
Match: A0A7S2RA13_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RA13_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 8.340e-10
Identity = 51/143 (35.66%), Postives = 74/143 (51.75%), Query Frame = 0

Query:  132 PARTVTVAGDCLRFE-HLESKCSLALALRASGLAHMSPETVCLRWDEALP--PAAAARVARAAPWVLKRDGGSGGHDVFVVTRAADADALIAAAAALQAALPFHAERAAIPGWALQRHVDAPLLVRGGR---KFHARVYALAL 268
            P   V    D  R   H+ESK  LAL           P++  + WD +LP     +  ++ + P+VLKRDGGS GHD+  V      +  IA    +++ALPF  ER  I  WALQ++VD P++++      KFH R Y +A+
Sbjct:   49 PGHVVKACADISRIAWHVESKHYLALQTSLP-----CPKSFAIPWDVSLPLPKEVSCCISSSTPYVLKRDGGSEGHDITFVNSPEQVEECIAQVQEMESALPFADERP-ISNWALQKYVDPPMVLKVDGLPYKFHVRAYVVAV 185

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|339728 vs. uniprot

BLAST of jgi.p|Trimin1|339728 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A835YJG6_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A7S2RA13_9STRA	8.340e-10	35.66	Hypothetical protein n=1 Tax=labyrinthulid quahog ...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004344	Tubulin-tyrosine ligase/Tubulin polyglutamylase	PFAM	PF03133	TTL	coord: 567..605 e-value: 5.4E-7 score: 29.0
None	No IPR available	GENE3D	3.30.470.20		coord: 555..637 e-value: 1.7E-8 score: 36.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 320..343
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 320..335
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 522..541
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 435..485
None	No IPR available	PANTHER	PTHR12241:SF16	TUBULIN POLYGLUTAMYLASE TTLL5	coord: 572..604
None	No IPR available	PANTHER	PTHR12241	TUBULIN POLYGLUTAMYLASE	coord: 572..604
None	No IPR available	PANTHER	PTHR12241	TUBULIN POLYGLUTAMYLASE	coord: 162..267
None	No IPR available	PANTHER	PTHR12241:SF16	TUBULIN POLYGLUTAMYLASE TTLL5	coord: 162..267
None	No IPR available	SUPERFAMILY	56059	Glutathione synthetase ATP-binding domain-like	coord: 181..280

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_98	contig	Contig_98:280552..283299 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|339728	mRNA_14906	Tribonema minus UTEX_B_3156	mRNA	Contig_98 280510..283299 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|339728|MIX48491_36_51 ID=Trimin1|339728|MIX48491_36_51|Name=jgi.p|Trimin1|339728|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=662bp
MPAFQDVLCEAALRNLGIPLNNKKGRQKPRRSSSGGDAFDYFGLFRLSLS
SSCGTWHGDVNTSSHGGGGGGGSANGGSNGGSSSSSSAGLTAASAPSTAA
ACACDYPCRSGHCPPALNPNAAAPPPLAAAAPARTVTVAGDCLRFEHLES
KCSLALALRASGLAHMSPETVCLRWDEALPPAAAARVARAAPWVLKRDGG
SGGHDVFVVTRAADADALIAAAAALQAALPFHAERAAIPGWALQRHVDAP
LLVRGGRKFHARVYALALDGSVRDDCCGGGGAAGNSSGGGCLCCCGGGEC
GSDGGGGECGSGTSGNGDATAAVTGTESVSIGGGSSGGGGSGGGGGGGGG
SGCGSCSTGGSGSGGVFYVHDRVEVRVAAQRFDASDFTARAAHITNGAGG
SDTARLLARNVLELADEEPRLRAFVADIMRRVLLPPPRRRSQQRGSGGSC
DGGSSGDEGCDSDGGGSGGSGSDGGSGGDEGGGCDSGDGSSGGGCVGGGG
SGGGGGGGGSCQRATSSCGSGMNGDGGSGDSSSASGGNSSGGSGSGGGGS
ASASGCCRCARASAGAAPGAGSTARQRSFALLAFDVMLDSARRPWLLEVN
HNPAVPSREVLAGEGECGDAFWEHLVGLCQDIIEVTALEVGGAPARAERE
HAGFGAALHCH*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR004344	TTL/TTLL_fam