Trimin1|339562|MIX48325_2_12 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|339562
Unique Name	Trimin1\|339562\|MIX48325_2_12
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	439

Homology

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BLAST of jgi.p|Trimin1|339562 vs. uniprot
Match: A0A836C7L2_9STRA (UBX domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7L2_9STRA)

HSP 1 Score: 717 bits (1850), Expect = 2.160e-258
Identity = 438/438 (100.00%), Postives = 438/438 (100.00%), Query Frame = 0

Query:    1 MGAADVDAALEGGVDWRLRQQLLLGSLATVAAAFLLQSLAAHAARWVTRRRREAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAVAVFEAFSLSALQERHTALSSSSHLKEGAAVSAAETDVAXXXXXXXXXXXXXXXXAPSRPGDIFAVHERQCADARQRMAEMGSGTPTEHDDHQRVNGQQRSQQGSRVDAAGATSPAVPDGPANLKLNSPPDSPAVKTWSLDGDIAAALQYGAGLGGVLSTDAGDGDAQQTAAAARRELLLQQDLAYAVSLEADRQRDRDTAATLSSPAGATERCNEDAERCHSAPSNGQLHSPAASISALPAPTLSEELPHEPPANFDNTHGGAAAGTGEGEGVVRVCFKCGGARIVRRFAASSRVSDLYAYVRRARLAQGRWELRRSYPQEALSDDSMSQQTIEDFGLADAVLIVQPLE 438
            MGAADVDAALEGGVDWRLRQQLLLGSLATVAAAFLLQSLAAHAARWVTRRRREAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAVAVFEAFSLSALQERHTALSSSSHLKEGAAVSAAETDVAXXXXXXXXXXXXXXXXAPSRPGDIFAVHERQCADARQRMAEMGSGTPTEHDDHQRVNGQQRSQQGSRVDAAGATSPAVPDGPANLKLNSPPDSPAVKTWSLDGDIAAALQYGAGLGGVLSTDAGDGDAQQTAAAARRELLLQQDLAYAVSLEADRQRDRDTAATLSSPAGATERCNEDAERCHSAPSNGQLHSPAASISALPAPTLSEELPHEPPANFDNTHGGAAAGTGEGEGVVRVCFKCGGARIVRRFAASSRVSDLYAYVRRARLAQGRWELRRSYPQEALSDDSMSQQTIEDFGLADAVLIVQPLE
Sbjct:    1 MGAADVDAALEGGVDWRLRQQLLLGSLATVAAAFLLQSLAAHAARWVTRRRREAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAVAVFEAFSLSALQERHTALSSSSHLKEGAAVSAAETDVAXXXXXXXXXXXXXXXXAPSRPGDIFAVHERQCADARQRMAEMGSGTPTEHDDHQRVNGQQRSQQGSRVDAAGATSPAVPDGPANLKLNSPPDSPAVKTWSLDGDIAAALQYGAGLGGVLSTDAGDGDAQQTAAAARRELLLQQDLAYAVSLEADRQRDRDTAATLSSPAGATERCNEDAERCHSAPSNGQLHSPAASISALPAPTLSEELPHEPPANFDNTHGGAAAGTGEGEGVVRVCFKCGGARIVRRFAASSRVSDLYAYVRRARLAQGRWELRRSYPQEALSDDSMSQQTIEDFGLADAVLIVQPLE 438

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|339562 vs. uniprot

BLAST of jgi.p|Trimin1|339562 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A836C7L2_9STRA	2.160e-258	100.00	UBX domain-containing protein n=1 Tax=Tribonema mi...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.20.90		coord: 358..436 e-value: 3.7E-11 score: 44.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 154..218
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 286..353
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..83
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..86
None	No IPR available	CDD	cd01767	UBX	coord: 364..435 e-value: 3.47494E-10 score: 54.1916
IPR001012	UBX domain	PFAM	PF00789	UBX	coord: 371..435 e-value: 1.6E-8 score: 34.6
IPR001012	UBX domain	PROSITE	PS50033	UBX	coord: 371..435 score: 11.762993
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 356..434

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_97	contig	Contig_97:196377..200942 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|339562	mRNA_14206	Tribonema minus UTEX_B_3156	mRNA	Contig_97 196377..200942 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|339562|MIX48325_2_12 ID=Trimin1|339562|MIX48325_2_12|Name=jgi.p|Trimin1|339562|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=439bp
MGAADVDAALEGGVDWRLRQQLLLGSLATVAAAFLLQSLAAHAARWVTRR
RREAKQAAQVLQDLRARQRAPPPPPPLPPHPRNSAPSAVAVFEAFSLSAL
QERHTALSSSSHLKEGAAVSAAETDVAAAAAAAATAAAAGAAAAPSRPGD
IFAVHERQCADARQRMAEMGSGTPTEHDDHQRVNGQQRSQQGSRVDAAGA
TSPAVPDGPANLKLNSPPDSPAVKTWSLDGDIAAALQYGAGLGGVLSTDA
GDGDAQQTAAAARRELLLQQDLAYAVSLEADRQRDRDTAATLSSPAGATE
RCNEDAERCHSAPSNGQLHSPAASISALPAPTLSEELPHEPPANFDNTHG
GAAAGTGEGEGVVRVCFKCGGARIVRRFAASSRVSDLYAYVRRARLAQGR
WELRRSYPQEALSDDSMSQQTIEDFGLADAVLIVQPLE*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001012	UBX_dom
IPR029071	Ubiquitin-like_domsf