Trimin1|338993|MIX47756_7_37 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|338993
Unique NameTrimin1|338993|MIX47756_7_37
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length500
Homology
BLAST of jgi.p|Trimin1|338993 vs. uniprot
Match: A0A835YIS2_9STRA (Toprim domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIS2_9STRA)

HSP 1 Score: 848 bits (2190), Expect = 4.100e-308
Identity = 500/500 (100.00%), Postives = 500/500 (100.00%), Query Frame = 0
Query:    1 SFARISDHSLEALRRTARLSHVIGEHVKLTSSGHTSMKGCCPFHDDKTPSLSVDDAKGLYHCFGCGAGGDVIKFVMETERLSFAAAAKTLAEQHGVQLTYEGGGGGYSADMSEAAQAARDAKLAQRDRLLRALQLAAEFYARSLSTARTAGAARAHLASRGVSPATALRFQLGYSPAXXXXXXXXXXXXXXXXXXXXVQAGLAYNNTASGGGGGGAPLLDRFRGRLIVPIRDARGAVVAFGGRELPXXXXXXXXXXXXXXXXXXXXXXXXVRKVPKYLNSPETDVFHKGGMLFGLDAARDAIRDEDMAVLVEGYFDVIALHGAGVRCAVGALGTAVTPRQLDLAARHSRGRRVVLCMDADAAGAKAVERLCEGGALEEAAANGIEVRVADIAAAAPGCKDPSDFVAEAAAAXXXXAGKGGKAPWTVWYTDRVLAAHDHGGDAAAFRACVDKLTTFLSALADPADRTNHVYRVAAALSGDNLALRLQLEADLMAMVAAKEK 500
            SFARISDHSLEALRRTARLSHVIGEHVKLTSSGHTSMKGCCPFHDDKTPSLSVDDAKGLYHCFGCGAGGDVIKFVMETERLSFAAAAKTLAEQHGVQLTYEGGGGGYSADMSEAAQAARDAKLAQRDRLLRALQLAAEFYARSLSTARTAGAARAHLASRGVSPATALRFQLGYSPAXXXXXXXXXXXXXXXXXXXXVQAGLAYNNTASGGGGGGAPLLDRFRGRLIVPIRDARGAVVAFGGRELPXXXXXXXXXXXXXXXXXXXXXXXXVRKVPKYLNSPETDVFHKGGMLFGLDAARDAIRDEDMAVLVEGYFDVIALHGAGVRCAVGALGTAVTPRQLDLAARHSRGRRVVLCMDADAAGAKAVERLCEGGALEEAAANGIEVRVADIAAAAPGCKDPSDFVAEAAAAXXXXAGKGGKAPWTVWYTDRVLAAHDHGGDAAAFRACVDKLTTFLSALADPADRTNHVYRVAAALSGDNLALRLQLEADLMAMVAAKEK
Sbjct:    1 SFARISDHSLEALRRTARLSHVIGEHVKLTSSGHTSMKGCCPFHDDKTPSLSVDDAKGLYHCFGCGAGGDVIKFVMETERLSFAAAAKTLAEQHGVQLTYEGGGGGYSADMSEAAQAARDAKLAQRDRLLRALQLAAEFYARSLSTARTAGAARAHLASRGVSPATALRFQLGYSPAXXXXXXXXXXXXXXXXXXXXVQAGLAYNNTASGGGGGGAPLLDRFRGRLIVPIRDARGAVVAFGGRELPXXXXXXXXXXXXXXXXXXXXXXXXVRKVPKYLNSPETDVFHKGGMLFGLDAARDAIRDEDMAVLVEGYFDVIALHGAGVRCAVGALGTAVTPRQLDLAARHSRGRRVVLCMDADAAGAKAVERLCEGGALEEAAANGIEVRVADIAAAAPGCKDPSDFVAEAAAAXXXXAGKGGKAPWTVWYTDRVLAAHDHGGDAAAFRACVDKLTTFLSALADPADRTNHVYRVAAALSGDNLALRLQLEADLMAMVAAKEK 500          
BLAST of jgi.p|Trimin1|338993 vs. uniprot
Match: D7G3B8_ECTSI (DNA primase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3B8_ECTSI)

HSP 1 Score: 374 bits (960), Expect = 5.800e-114
Identity = 239/545 (43.85%), Postives = 303/545 (55.60%), Query Frame = 0
Query:    5 ISDHSLEALRRTARLSHVIGEHVKLTSSGHTSMKGCCPFHDDKTPSLSVDDAKGLYHCFGCGAGGDVIKFVMETERLSFAAAAKTLAEQHGVQLTYE----GGGGGYSADMSEAAQAARDAKLAQRDRLLRALQLAAEFYARSLSTARTAGAARAHLASRGVSPATALRFQLGYSPAXXXXXXXXXXXXXXXXXXXXVQAGLA-------YNNTASGGGGGGAPLLDRFRGRLIVPIRDARGAVVAFGGRELPXXXXXXXXXXXXXXXXXXXXXXXX----------------------------------------VRKVPKYLNSPETDVFHKGGMLFGLDAARDAIRDEDMAVLVEGYFDVIALHGAGVRCAVGALGTAVTPRQLDLAARHSRGRRVVLCMDADAAGAKAVERLCEGGA---LEEAAANGIEVRVADIAAAAPGCKDPSDFVAEAAAAXXXXAGKGGKA-PWTVWYTDRVLAAHDHGGDAAAFRACVDKLTTFLSALADPADRTNHVYRVAAALSGDNLALRLQLEADLMAM 494
            I+D +L+ +R +  ++ VIG+HV++  +G   M GCCPFH+D+TPS SVDD++G YHCFGCGA GDVI F+M+ + L F      LA + G+ L +E    G GGG      E A+  R+A    R+RL   LQ+AA+FY R L     AG ARAH+  RG+SP T + FQLGYSPA                    V AGL        Y  + +   G     +DRFRGRL+VPIRD RG V+ FG R+L                                                                  R   KYLNSPET +F KG  +FGLD A++A+R ED A +VEGYFDVI LH AG+RCAVG LGTA+T  QL L AR+++ +RV+LCMD DAAG +AVERLCE  A   L+  +  G+ V VA I    PGCKDP+DF+ +A  A    A   GKA PW+ WY D +LA HD  GDA AFR C D+LT F+S L+ P D+T HV+R A AL+G N A+R QLE DLM M
Sbjct:  183 ITDETLDLIRASTSITEVIGQHVEMKPAGR-GMVGCCPFHEDRTPSFSVDDSRGSYHCFGCGASGDVITFLMQIDGLGFREVVHDLAVEAGIPLGFENAADGSGGGKWDTADEKAR--REA----RERLSLVLQMAAQFYTRCLVEMPAAGGARAHIIERGISPMTVMDFQLGYSPADLTSPLIEYLDQEGFEMDTLVDAGLVPDTSKWKYRPSPNDARG----RVDRFRGRLVVPIRDHRGLVIGFGARDLSDSQAQGSVGSGFVIPDVSKKGKAKKKGEQTEAAAXXXXXXXXXXXXAGGKGVGEGADAGKWEKKARPPAKYLNSPETTLFKKGKNVFGLDLAKEAMRSEDTAFVVEGYFDVIKLHDAGIRCAVGVLGTAITIDQLQLCARYTKSKRVILCMDGDAAGRRAVERLCESPASSGLDSLSEAGVSVSVATIPED-PGCKDPADFL-QAHGAEEFRAKVMGKAVPWSDWYGDSILADHDFAGDANAFRRCTDRLTGFMSDLSIPTDQTFHVHRFAKALAGGNEAMRHQLEFDLMNM 714          
BLAST of jgi.p|Trimin1|338993 vs. uniprot
Match: A0A6H5K157_9PHAE (Toprim domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K157_9PHAE)

HSP 1 Score: 332 bits (852), Expect = 2.250e-98
Identity = 226/553 (40.87%), Postives = 280/553 (50.63%), Query Frame = 0
Query:   37 MKGCCPFHDDKTPSLSVDDAKGLYHCFGCGAGGDVIKFVMETERLSFAAAAKTLAEQHGVQLTYE----GGGGGYSADMSEAAQAARDAKLAQRDRLLRALQLAAEFYARSLSTARTAGAARAHLASRGVSPATALRFQLGYSPAXXXXXXXXXXXXXXXXXXXXVQAGLA-------YNNTASGGGGGGAPLLDRFRGRLIVPIRDARGAVVAFGGRELPXXXXXXXXXXXXXXXXXXXXXXXX--------------------------------------------------------------------------------VRKVPKYLNSPETDVFHKGGMLFGLDAARDAIRDEDMAVLVEGYFDVIALHGAGVRCAVGALGTAVTPRQLDLAARHSRGRRVVLCMDADAAGAKAVERLCEGGA---LEEAAANGIEVRVADIAAAAPGCKDPSDFVAEAAAAXXXXAGKGGKA-PWTVWYTDRVLAAHDHGGDAAAFRACVDKLTTFLSALADPADRTNHVYRVAAALSGDNLALRLQLEADLMAM 494
            M GCCPFH+D+TPS SVDD++G YHCFGCGA GDVI F+M+ + L F      LA + G+ L +E    G GGG      E A+  R+A    R+RL   LQ+AA+FY R L     AG ARAH+  RG+SP T + FQLGYSPA                    V AGL        Y  + +   G     +DRFRGRL+VPIRD RG V+ FG R+L                                                                                                          R   KYLNSPET +F KG  +FGLD A++A+R ED A +VEGYFDVI LH AG+RCAVG LGTA+T  QL L AR+++ +RV+LCMD DAAG +AVERLCE  A   L+  +  G+ V VA I   + GCKDP+DF+ +A  A    A    KA PW+VWY D +LA HD   DA AFR C D+L  F+S L+ P D+T HV+R A AL+G N A+R QLE DLM M
Sbjct:    8 MVGCCPFHEDRTPSFSVDDSRGSYHCFGCGASGDVITFLMQIDGLGFREVVHDLAVEAGIPLGFENAADGSGGGKWDTADEKAR--REA----RERLSLVLQMAAQFYTRCLVEMPAAGGARAHIIERGISPMTVMDFQLGYSPADLTSPLIEYLDQEGFEMDTLVDAGLVPDTSKWKYRPSPNDARG----RVDRFRGRLVVPIRDHRGLVIGFGARDLSDSQAQGSVGSGFVIPEVSNKGKAKKKGEQTEAAAAATGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGKGVGEGAVAGKWEKKARPPAKYLNSPETTLFKKGKNVFGLDLAKEAMRSEDTAFVVEGYFDVIKLHDAGIRCAVGVLGTAITIDQLQLCARYTKSKRVILCMDGDAAGRRAVERLCESPASSGLDSLSEAGVSVSVATIPEDS-GCKDPADFL-QAHGAEEFRAKVMDKAVPWSVWYGDSILADHDFASDANAFRRCTDRLAGFMSDLSIPTDQTFHVHRFAKALAGGNEAMRHQLEFDLMNM 548          
BLAST of jgi.p|Trimin1|338993 vs. uniprot
Match: K9P4J0_CYAGP (DNA primase n=5 Tax=Cyanobacteria TaxID=1117 RepID=K9P4J0_CYAGP)

HSP 1 Score: 256 bits (654), Expect = 6.170e-74
Identity = 191/494 (38.66%), Postives = 254/494 (51.42%), Query Frame = 0
Query:    4 RISDHSLEALRRTARLSHVIGEHVKLTSSGHTSMKGCCPFHDDKTPSLSVDDAKGLYHCFGCGAGGDVIKFVMETERLSFAAAAKTLAEQHGVQLTYEGGGGGYSADMSEAAQAARDAKLAQRDRLLRALQLAAEFYARSLSTARTAGAARAHLASRGVSPATALRFQLGYSPAXXXXXXXXXXXXXXXXXXXXVQAGLAYNNTASGGGGGGAPLLDRFRGRLIVPIRDARGAVVAFGGRELPXXXXXXXXXXXXXXXXXXXXXXXXVRKVPKYLNSPETDVFHKGGMLFGLDAARDAIRDEDMAVLVEGYFDVIALHGAGVRCAVGALGTAVTPRQLDLAARHSRGRRVVLCMDADAAGAKAVERLCEGGALEEAAANG-IEVRVADIAAAAPGCKDPSDFVAEAAAAXXXXAGKGGKAP-WTVWYTDRVLAAHDHGGDAAAFRACVDKLTTFLSALADPADRTNHVYRVAAALSGDNLALRLQLEADLMAMV 495
            R+   ++EA++  A +  V+GEHV L   G   + G CPFHDD +PS++V  AK  Y+CF CGAGG+ IKF+ME +R SF+     LA ++  QL  E   G     + +        +L++RDRL R L LAA ++   L ++  A A      SRG+S  T   FQLGY+PA                      AGL     A  GGGG     DRFR R++VPIRD +G V+ FGGR L                             PKYLNSPET+VF KG  LFGLD A DAIR +D AV+VEGYFDVIALH AG+  AV ALGTA++  Q+    R    RR++L  D+D AG +A +R    G +E+ A  G +E+RV  +    P  KDP +F+ +             +AP W  W  ++VL   D    A  F+  V  L   L  L   A R++++ +VA  LSG    L +QLE DL   V
Sbjct:    5 RLHPRTIEAVKERADIVDVVGEHVVLKKKGREFV-GICPFHDDTSPSMTVSPAKQFYYCFSCGAGGNAIKFLMELQRTSFSEVVLDLARKY--QLPVETLDGPQQERLRQ--------QLSRRDRLHRVLALAAGWFQGQLRSSEGAAALTYLRQSRGLSETTLEAFQLGYAPAGWDGLLQHLQQVEGLGPDLLEAAGLV---VARKGGGG---FYDRFRDRVMVPIRDRQGRVIGFGGRGLDGAE-------------------------PKYLNSPETEVFEKGKHLFGLDRAADAIRRDDRAVVVEGYFDVIALHAAGITNAVAALGTALSSSQITQLCRCCDSRRLILNFDSDGAGIRAAQRAI--GEVEQLALQGQLELRVLHL----PAGKDPDEFLQQHGPGEYRSLLD--QAPLWLDWQIEQVLEGKDLAR-ADQFQQAVSGLVQLLGKLPQSAVRSHYLQQVAERLSGGQARLAIQLEEDLRQQV 447          
BLAST of jgi.p|Trimin1|338993 vs. uniprot
Match: A0A164AFS3_9SYNE (DNA primase n=16 Tax=Synechococcales TaxID=1890424 RepID=A0A164AFS3_9SYNE)

HSP 1 Score: 256 bits (655), Expect = 7.860e-74
Identity = 191/494 (38.66%), Postives = 253/494 (51.21%), Query Frame = 0
Query:    4 RISDHSLEALRRTARLSHVIGEHVKLTSSGHTSMKGCCPFHDDKTPSLSVDDAKGLYHCFGCGAGGDVIKFVMETERLSFAAAAKTLAEQHGVQLTYEGGGGGYSADMSEAAQAARDAKLAQRDRLLRALQLAAEFYARSLSTARTAGAARAHLASRGVSPATALRFQLGYSPAXXXXXXXXXXXXXXXXXXXXVQAGLAYNNTASGGGGGGAPLLDRFRGRLIVPIRDARGAVVAFGGRELPXXXXXXXXXXXXXXXXXXXXXXXXVRKVPKYLNSPETDVFHKGGMLFGLDAARDAIRDEDMAVLVEGYFDVIALHGAGVRCAVGALGTAVTPRQLDLAARHSRGRRVVLCMDADAAGAKAVERLCEGGALEEAAANG-IEVRVADIAAAAPGCKDPSDFVAEAAAAXXXXAGKGGKAP-WTVWYTDRVLAAHDHGGDAAAFRACVDKLTTFLSALADPADRTNHVYRVAAALSGDNLALRLQLEADLMAMV 495
            R+   ++EA++  A +  V+GEHV L   G   + G CPFHDD  PS++V  AK  Y+CF CGAGG+ IKF+ME +R SF+     LA ++  QL  E   G     + +        +L++R++L RAL LA+ ++   L T   A A R    +RG+S  T  +F+LGY+P                       AGL           GG    DRFR R+IVPIRD +G V+ FGGR L                             PKYLNSPET+VF KG  LFGLD A  AIR +D AV+VEGYFDVIALH +GV  AV +LGTA++ +Q+    R S G+R+VL  DAD AG +A  R    G +E+ A  G +E+RV  +    P  KDP +F+ E  A          +AP W  W  ++VL   D    A  F+  V  L   L  L   A RT+++ +VA  LSG    L LQLE DL   V
Sbjct:   34 RLHPRTIEAVKERADIVDVVGEHVVLKKKGREFV-GICPFHDDSKPSMTVSPAKQFYYCFSCGAGGNSIKFLMEFQRQSFSEVVLDLARRY--QLPVETVDGPQQEKLKQ--------QLSRREKLHRALALASGWFRAQLRTDTGADALRYLRETRGLSETTLDQFELGYAPDQWDGLLKHLQQVEGLAPELLEAAGLVVPRK------GGNGFYDRFRHRVIVPIRDRQGRVIGFGGRSLDGSE-------------------------PKYLNSPETEVFEKGKHLFGLDRASSAIRKDDRAVVVEGYFDVIALHASGVTNAVASLGTALSSQQVTQLCRCSDGKRIVLNFDADGAGVRAANRAI--GEVEQLALQGQLELRVLHL----PSGKDPDEFLKEHGAGDYRALLD--QAPLWLDWQIEQVLEGRDLSR-ADQFQRSVASLVALLGKLPQSAIRTHYIQQVAERLSGGQGRLALQLEDDLRQQV 476          
BLAST of jgi.p|Trimin1|338993 vs. uniprot
Match: Q05TK2_9SYNE (DNA primase n=4 Tax=unclassified Synechococcus TaxID=2626047 RepID=Q05TK2_9SYNE)

HSP 1 Score: 256 bits (653), Expect = 7.970e-74
Identity = 190/494 (38.46%), Postives = 255/494 (51.62%), Query Frame = 0
Query:    4 RISDHSLEALRRTARLSHVIGEHVKLTSSGHTSMKGCCPFHDDKTPSLSVDDAKGLYHCFGCGAGGDVIKFVMETERLSFAAAAKTLAEQHGVQLTYEGGGGGYSADMSEAAQAARDAKLAQRDRLLRALQLAAEFYARSLSTARTAGAARAHLASRGVSPATALRFQLGYSPAXXXXXXXXXXXXXXXXXXXXVQAGLAYNNTASGGGGGGAPLLDRFRGRLIVPIRDARGAVVAFGGRELPXXXXXXXXXXXXXXXXXXXXXXXXVRKVPKYLNSPETDVFHKGGMLFGLDAARDAIRDEDMAVLVEGYFDVIALHGAGVRCAVGALGTAVTPRQLDLAARHSRGRRVVLCMDADAAGAKAVERLCEGGALEEAAANG-IEVRVADIAAAAPGCKDPSDFVAEAAAAXXXXAGKGGKAP-WTVWYTDRVLAAHDHGGDAAAFRACVDKLTTFLSALADPADRTNHVYRVAAALSGDNLALRLQLEADLMAMV 495
            R+   +++A++  A +  V+GEHV L   G   + G CPFHDD  PS++V  AK  Y+CF CGAGG+ IKF+ME +R SF+     LA ++  QL  E   G     + +        +L++R++L RAL LA+ ++   L TA   GA +    SRG+S AT   F+LGY+P                       AGL           GG    DRFR R++VPIRD +G V+ FGGR L                             PKYLNSPET+VF KG  LFGLD A +AIR +D AV+VEGYFDVIALH AG+  AV +LGTA++ +Q+    R S G+R+VL  DAD AG +A  R    G +E+ A  G +E+RV  +    P  KDP +F+ +  A          +AP W  W  ++VL   D    A  F+  V  L   L  L   A RT+++ +VA  LSG    L LQLE DL   V
Sbjct:    5 RLHPRTIDAVKERADIVDVVGEHVVLKKKGREFV-GICPFHDDSKPSMTVSPAKQFYYCFSCGAGGNSIKFLMELQRQSFSDVVLELARKY--QLPVETVDGPQQERLRQ--------QLSRREKLHRALALASGWFRTQLRTAAGQGALQYLRESRGLSEATLDAFELGYAPDQWDGLLKHLQQVEGLSPEMLEAAGLVVPRK------GGNGFYDRFRHRVMVPIRDRQGRVIGFGGRSLDGAE-------------------------PKYLNSPETEVFEKGKHLFGLDRAANAIRKDDRAVVVEGYFDVIALHAAGITNAVASLGTALSSQQITQLCRCSDGKRIVLNFDADGAGIRAANRAI--GEVEQLALQGQLELRVLHL----PSGKDPDEFLKDHGAGDYRALLD--QAPLWLDWQIEQVLEGRDLA-KADQFQQGVSALVALLGKLPPSAIRTHYLQQVAERLSGGQGRLALQLEDDLRQQV 447          
BLAST of jgi.p|Trimin1|338993 vs. uniprot
Match: Q7V7U2_PROMM (DNA primase n=10 Tax=Prochlorococcus TaxID=1218 RepID=Q7V7U2_PROMM)

HSP 1 Score: 255 bits (652), Expect = 9.880e-74
Identity = 192/494 (38.87%), Postives = 251/494 (50.81%), Query Frame = 0
Query:    4 RISDHSLEALRRTARLSHVIGEHVKLTSSGHTSMKGCCPFHDDKTPSLSVDDAKGLYHCFGCGAGGDVIKFVMETERLSFAAAAKTLAEQHGVQLTYEGGGGGYSADMSEAAQAARDAKLAQRDRLLRALQLAAEFYARSLSTARTAGAARAHLASRGVSPATALRFQLGYSPAXXXXXXXXXXXXXXXXXXXXVQAGLAYNNTASGGGGGGAPLLDRFRGRLIVPIRDARGAVVAFGGRELPXXXXXXXXXXXXXXXXXXXXXXXXVRKVPKYLNSPETDVFHKGGMLFGLDAARDAIRDEDMAVLVEGYFDVIALHGAGVRCAVGALGTAVTPRQLDLAARHSRGRRVVLCMDADAAGAKAVERLCEGGALEEAAANG-IEVRVADIAAAAPGCKDPSDFVAEAAAAXXXXAGKGGKAP-WTVWYTDRVLAAHDHGGDAAAFRACVDKLTTFLSALADPADRTNHVYRVAAALSGDNLALRLQLEADLMAMV 495
            R+   ++EA++  A +  V+GEHV L   G   + G CPFHDD  PS++V  AK  Y+CF CGAGG+ IKF+ME +R SF      LA ++  QL  E   G     + +        +L++RD+L RAL LAA ++   L T   A A       RG+S  T   F+LGY+P                       AGL     A  GGGG     DRFR R++VPI D +G V+ FGGR L                             PKYLNSPETDVF KG  LFGLD A +AIR +D AV+VEGYFDVIALH AGV  +V +LGTA++ +Q+    R S G+R+VL  DAD AG +A  R    G +E+ A  G +E+RV  +    P  KDP +F+ +  A          ++P W  W   +VL   D    A  F+  V  L   L  L   A RT+++ +VA  LSG    L LQLE DL   V
Sbjct:    5 RLHPRTIEAVKERADIVDVVGEHVVLKKKGREFV-GICPFHDDSKPSMTVSPAKQFYYCFSCGAGGNSIKFLMEFQRQSFGDVVLELARKY--QLPVETVEGPQQERLRQ--------QLSRRDKLHRALALAAGWFRGQLRTPVGASALNYLTEKRGLSEVTLESFELGYAPEQWDGLLKHLQQVEGLSAELLEAAGLV---VARKGGGG---FYDRFRHRVMVPIHDRQGRVIGFGGRSLDGSE-------------------------PKYLNSPETDVFEKGKHLFGLDRAANAIRKDDRAVVVEGYFDVIALHAAGVTNSVASLGTALSSQQITQICRCSEGKRIVLNFDADGAGVRAANRAI--GEVEQLALQGQLELRVLHL----PSGKDPDEFLKDHGAGDYRALLD--QSPLWLDWQIQQVLEGRDLS-QADQFQQAVSGLVALLGKLPQSAVRTHYLQQVAERLSGGQGRLALQLEEDLRQQV 447          
BLAST of jgi.p|Trimin1|338993 vs. uniprot
Match: A5GKN4_SYNPW (DNA primase n=6 Tax=unclassified Synechococcus TaxID=2626047 RepID=A5GKN4_SYNPW)

HSP 1 Score: 255 bits (651), Expect = 1.650e-73
Identity = 190/495 (38.38%), Postives = 251/495 (50.71%), Query Frame = 0
Query:    3 ARISDHSLEALRRTARLSHVIGEHVKLTSSGHTSMKGCCPFHDDKTPSLSVDDAKGLYHCFGCGAGGDVIKFVMETERLSFAAAAKTLAEQHGVQLTYEGGGGGYSADMSEAAQAARDAKLAQRDRLLRALQLAAEFYARSLSTARTAGAARAHLASRGVSPATALRFQLGYSPAXXXXXXXXXXXXXXXXXXXXVQAGLAYNNTASGGGGGGAPLLDRFRGRLIVPIRDARGAVVAFGGRELPXXXXXXXXXXXXXXXXXXXXXXXXVRKVPKYLNSPETDVFHKGGMLFGLDAARDAIRDEDMAVLVEGYFDVIALHGAGVRCAVGALGTAVTPRQLDLAARHSRGRRVVLCMDADAAGAKAVERLCEGGALEEAAANG-IEVRVADIAAAAPGCKDPSDFVAEAAAAXXXXAGKGGKAP-WTVWYTDRVLAAHDHGGDAAAFRACVDKLTTFLSALADPADRTNHVYRVAAALSGDNLALRLQLEADLMAMV 495
            AR+   ++EA++  A +  V+GEHV L   G   + G CPFHDD  PS++V  AK  Y+CF CGAGG+ IKF+ME +R SF+     LA ++  QL  E   G     + +        +L++RD L R L LAA ++   L  A  A A R     RG+S AT  +F+LGY+P                       AGL           GG    DRFR R++VPI+D +G V+ FGGR L                             PKYLNSPET+VF KG  LFGLD A  AIR +D AV+VEGYFDVIALH AGV  AV +LGTA++ +Q+    R   G+R+VL  DAD AG +A  R    G +E+ A  G +E+RV  +    P  KDP +F+ +  A          +AP W  W  ++VL   D    A  F+  V  L   L  L   A RT+++ +V+  LSG    L LQLE DL   V
Sbjct:    4 ARLHPRTIEAVKERADIVDVVGEHVVLKKKGREFV-GICPFHDDSKPSMTVSPAKQFYYCFSCGAGGNSIKFLMEFQRQSFSEVVLDLARRY--QLPVETVDGPQQERLKQ--------QLSRRDTLHRVLALAAGWFRSQLKVASGAEALRYLQDKRGLSDATLEQFELGYAPDQWDGLLKHLQQVEGLDPQHLEAAGLVVPRK------GGNGFYDRFRHRVMVPIKDRQGRVIGFGGRSLDGTE-------------------------PKYLNSPETEVFEKGKHLFGLDRAASAIRKDDRAVVVEGYFDVIALHAAGVTNAVASLGTALSSQQITQLCRCCDGKRIVLNFDADGAGVRAANRAI--GEVEQLALQGQLELRVLHL----PSGKDPDEFLKDHGAGDYRALLD--QAPLWLDWQIEQVLEGRDLS-KADQFQRSVSALVELLGKLPQSAIRTHYIQQVSERLSGGQGRLALQLEEDLRQQV 447          
BLAST of jgi.p|Trimin1|338993 vs. uniprot
Match: A0A076H103_9SYNE (DNA primase n=3 Tax=unclassified Synechococcus TaxID=2626047 RepID=A0A076H103_9SYNE)

HSP 1 Score: 254 bits (648), Expect = 3.620e-73
Identity = 191/496 (38.51%), Postives = 257/496 (51.81%), Query Frame = 0
Query:    3 ARISDHSLEALRRTARLSHVIGEHVKLTSSGHTSMKGCCPFHDDKTPSLSVDDAKGLYHCFGCGAGGDVIKFVMETERLSFAAAAKTLAEQHGVQLTYEGGGGGYSADMSEAAQAARDAKLAQRDRLLRALQLAAEFYARSLSTARTAGAARAHLAS-RGVSPATALRFQLGYSPAXXXXXXXXXXXXXXXXXXXXVQAGLAYNNTASGGGGGGAPLLDRFRGRLIVPIRDARGAVVAFGGRELPXXXXXXXXXXXXXXXXXXXXXXXXVRKVPKYLNSPETDVFHKGGMLFGLDAARDAIRDEDMAVLVEGYFDVIALHGAGVRCAVGALGTAVTPRQLDLAARHSRGRRVVLCMDADAAGAKAVERLCEGGALEEAAANG-IEVRVADIAAAAPGCKDPSDFVAEAAAAXXXXAGKGGKAP-WTVWYTDRVLAAHDHGGDAAAFRACVDKLTTFLSALADPADRTNHVYRVAAALSGDNLALRLQLEADLMAMV 495
            AR+   ++EA++  A +  V+G+HV L   G   + G CPFHDD  PS++V  AK  Y+CF CGAGG+ IKF+ME +R SF+     LA ++  QL  E   G     + +        +L++R++L RA  LAA ++ RS         AR++L+  RG+SPAT   FQLGY+P                       AGL           GG    DRFR RL+VPI D +G V+ FGGR L                             PKYLNSPET++F KG  LFGLD A  AIR +D AV+VEGYFDVIALH AG+  AV ALGTA++ +Q+   +R S G+R+VL  DAD AG +A  R    G +E+ A  G +++RV  +    P  KDP +F+ E  +          +AP W  W  ++VL   D    +  F+  V +L   L  L   A RT+++ RVA  LSG    L LQLE DL   V
Sbjct:    4 ARLHPRTIEAVKERADIVDVVGDHVVLKKKGREFV-GICPFHDDSKPSMTVSPAKQFYYCFSCGAGGNSIKFLMEFQRQSFSDVVLELARKY--QLPVETVDGPQQERLRQ--------QLSRREKLQRATALAAGWF-RSQLLGEGGEQARSYLSEKRGLSPATQDTFQLGYAPDRWDGLLTHLQQVEGLSPELLEAAGLVVPRK------GGRGFYDRFRHRLMVPIHDRQGRVIGFGGRSLDGAE-------------------------PKYLNSPETELFEKGKHLFGLDKAAGAIRKDDRAVVVEGYFDVIALHAAGITNAVAALGTALSHQQITQLSRVSDGKRIVLNFDADGAGVRAANRAI--GEVEQLAMQGQLDLRVLHL----PSGKDPDEFLKEHGSGEYRALLD--QAPLWLDWQIEQVLEDRDLSR-SDQFQQAVSELVGLLGKLPQSAVRTHYLQRVAERLSGGQARLALQLEEDLRQQV 447          
BLAST of jgi.p|Trimin1|338993 vs. uniprot
Match: A5GTL3_SYNR3 (DNA primase n=6 Tax=Synechococcales TaxID=1890424 RepID=A5GTL3_SYNR3)

HSP 1 Score: 253 bits (647), Expect = 4.220e-73
Identity = 185/498 (37.15%), Postives = 252/498 (50.60%), Query Frame = 0
Query:    1 SFARISDHSLEALRRTARLSHVIGEHVKLTSSGHTSMKGCCPFHDDKTPSLSVDDAKGLYHCFGCGAGGDVIKFVMETERLSFAAAAKTLAEQHGVQLTYEGGGGGYSADMSEAAQAAR-DAKLAQRDRLLRALQLAAEFYARSLSTARTAGAARAHLASRGVSPATALRFQLGYSPAXXXXXXXXXXXXXXXXXXXXVQAGLAYNNTASGGGGGGAPLLDRFRGRLIVPIRDARGAVVAFGGRELPXXXXXXXXXXXXXXXXXXXXXXXXVRKVPKYLNSPETDVFHKGGMLFGLDAARDAIRDEDMAVLVEGYFDVIALHGAGVRCAVGALGTAVTPRQLDLAARHSRGRRVVLCMDADAAGAKAVERLCEGGALEEAAANG-IEVRVADIAAAAPGCKDPSDFVAEAAAAXXXXAGKGGKAP-WTVWYTDRVLAAHDHGGDAAAFRACVDKLTTFLSALADPADRTNHVYRVAAALSGDNLALRLQLEADLMAMV 495
            S  R+   ++EA++  A +  V+GEHV L   G   + G CPFHDDK+PS++V  AK  Y+CF CGAGG+ +KF+ME +R SF+     LA ++ + +           +  +A Q  R   +L++RD+L R L LA+ ++   L     A A       RG+S  T   F+LGY+P                       AGL           GG    DRFR RL+VPI D +G ++ FGGR L                             PKYLNSPET+VF KG  L+G D A D IR  D A++VEGYFDVIALH AGVR AV ALGTA++ +Q+    R S  RR++L  DAD AG +A +R    G +E+ A  G +E+RV  +    P  KDP +F+ + + A          AP W  W  ++VL+  D G  A  F+  V  L   L  L   A R++++ RVA  LSG    + LQLE DL   V
Sbjct:    2 SVPRLHPRTIEAVKERADIVDVVGEHVMLKKKGREFV-GLCPFHDDKSPSMTVSPAKQFYYCFSCGAGGNSLKFLMELKRQSFSDVVMELARRYSLPV-----------ETLDANQQERLRQQLSRRDQLHRVLSLASGWFRSRLQAPEGAAALEYLRKQRGLSAGTIESFELGYAPEAWDGLLRHLQQVEGIDPSLMEAAGLVVPRK------GGNGFYDRFRHRLMVPIHDRQGRIIGFGGRSLDGSE-------------------------PKYLNSPETEVFDKGKHLYGFDKAADPIRRADCALVVEGYFDVIALHAAGVRHAVAALGTAMSAQQVTQLCRCSESRRIILNFDADGAGVRAAQRTI--GEVEQQALQGQLELRVLHL----PAGKDPDEFLKQHSQADYLALQD--NAPLWLDWQIEQVLSGKDLGR-ADQFQLAVQGLVELLGKLPQSALRSHYLQRVAERLSGGQARMALQLEEDLRQQV 447          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|338993 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YIS2_9STRA4.100e-308100.00Toprim domain-containing protein (Fragment) n=1 Ta... [more]
D7G3B8_ECTSI5.800e-11443.85DNA primase n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A6H5K157_9PHAE2.250e-9840.87Toprim domain-containing protein n=1 Tax=Ectocarpu... [more]
K9P4J0_CYAGP6.170e-7438.66DNA primase n=5 Tax=Cyanobacteria TaxID=1117 RepID... [more]
A0A164AFS3_9SYNE7.860e-7438.66DNA primase n=16 Tax=Synechococcales TaxID=1890424... [more]
Q05TK2_9SYNE7.970e-7438.46DNA primase n=4 Tax=unclassified Synechococcus Tax... [more]
Q7V7U2_PROMM9.880e-7438.87DNA primase n=10 Tax=Prochlorococcus TaxID=1218 Re... [more]
A5GKN4_SYNPW1.650e-7338.38DNA primase n=6 Tax=unclassified Synechococcus Tax... [more]
A0A076H103_9SYNE3.620e-7338.51DNA primase n=3 Tax=unclassified Synechococcus Tax... [more]
A5GTL3_SYNR34.220e-7337.15DNA primase n=6 Tax=Synechococcales TaxID=1890424 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006171TOPRIM domainSMARTSM00493toprim5coord: 306..379
e-value: 1.1E-7
score: 41.6
IPR006171TOPRIM domainPROSITEPS50880TOPRIMcoord: 306..396
score: 13.930201
IPR002694Zinc finger, CHC2-typeSMARTSM00400primzinc3coord: 37..91
e-value: 4.9E-32
score: 122.4
IPR002694Zinc finger, CHC2-typePFAMPF01807zf-CHC2coord: 6..101
e-value: 4.8E-31
score: 106.5
IPR037068DNA primase, catalytic core, N-terminal domain superfamilyGENE3D3.90.980.10coord: 121..286
e-value: 1.3E-33
score: 117.7
NoneNo IPR availablePFAMPF13155Toprim_2coord: 309..404
e-value: 9.7E-14
score: 51.5
NoneNo IPR availableGENE3D3.40.1360.10coord: 288..418
e-value: 1.3E-29
score: 104.8
NoneNo IPR availablePIRSRPIRSR002811-1PIRSR002811-1coord: 4..245
e-value: 2.0E-64
score: 216.3
NoneNo IPR availablePANTHERPTHR30313DNA PRIMASEcoord: 5..480
NoneNo IPR availableSUPERFAMILY56731DNA primase corecoord: 129..473
NoneNo IPR availableSUPERFAMILY57783Zinc beta-ribboncoord: 4..100
IPR013264DNA primase, catalytic core, N-terminalPFAMPF08275Toprim_Ncoord: 139..298
e-value: 3.3E-26
score: 91.8
IPR036977DNA Primase, CHC2-type zinc fingerGENE3D3.90.580.10coord: 2..101
e-value: 3.5E-32
score: 112.3
IPR030846DNA primase DnaG, bacteriaHAMAPMF_00974DNA_primase_DnaGcoord: 4..500
score: 20.536137
IPR034151Bacterial DnaG primase, TOPRIM domainCDDcd03364TOPRIM_DnaG_primasescoord: 308..389
e-value: 8.3215E-24
score: 92.9623

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_94contigContig_94:133851..135422 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|338993mRNA_7938Tribonema minus UTEX_B_3156 mRNAContig_94 133851..135422 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|338993|MIX47756_7_37 ID=Trimin1|338993|MIX47756_7_37|Name=jgi.p|Trimin1|338993|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=500bp
SFARISDHSLEALRRTARLSHVIGEHVKLTSSGHTSMKGCCPFHDDKTPS
LSVDDAKGLYHCFGCGAGGDVIKFVMETERLSFAAAAKTLAEQHGVQLTY
EGGGGGYSADMSEAAQAARDAKLAQRDRLLRALQLAAEFYARSLSTARTA
GAARAHLASRGVSPATALRFQLGYSPAEAPGAVLQHLMAQGVEPQTLVQA
GLAYNNTASGGGGGGAPLLDRFRGRLIVPIRDARGAVVAFGGRELPPPAA
ARADAAATDAVDDAPPPPPPVRKVPKYLNSPETDVFHKGGMLFGLDAARD
AIRDEDMAVLVEGYFDVIALHGAGVRCAVGALGTAVTPRQLDLAARHSRG
RRVVLCMDADAAGAKAVERLCEGGALEEAAANGIEVRVADIAAAAPGCKD
PSDFVAEAAAAAATAAGKGGKAPWTVWYTDRVLAAHDHGGDAAAFRACVD
KLTTFLSALADPADRTNHVYRVAAALSGDNLALRLQLEADLMAMVAAKEK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006171TOPRIM_domain
IPR002694Znf_CHC2
IPR037068DNA_primase_core_N_sf
IPR013264DNA_primase_core_N
IPR036977DNA_primase_Znf_CHC2
IPR030846DnaG_bac
IPR034151TOPRIM_DnaG_bac