Trimin1|338969|MIX47732_8_39 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|338969
Unique NameTrimin1|338969|MIX47732_8_39
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length551
Homology
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BLAST of jgi.p|Trimin1|338969 vs. uniprot
Match: A0A836C755_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C755_9STRA)

HSP 1 Score: 938 bits (2424), Expect = 0.000e+0
Identity = 550/550 (100.00%), Postives = 550/550 (100.00%), Query Frame = 0 
Query:    1 MLVLAPVPAARRDVDGVCQALKERAGPVGRLDLTHNVVSLQAALALADIIREHGVRELVLSGSACPAKDAQIAQVVQHLQSQRSCSTNGHQALRLLDLRNTNLGVSGSQSRSPLHHHMLSQIQAGGALASVRELNLSNSFIGGFSGNGATVSILAELLKRAPHLHTLDLSRNRLSGQAVETVVNALLRMCAARPVGAGMRALLLDWNNEMGNKGAFAAGHLLSRCRASMRKLSLASCGLREAAARALAAGASQTQSSHVSGGLDALSISAAHEAAQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAEPGCDVDLSCNHISATGLTFLAHALLHAALPVTALRLRSNDHIGDAAGDPVSALAAFVQALATAPRLRVLDLSGTRVPPQHLLHFAACLRDSWAAGRRPPRPPLAALNLSRCQVGVHNAQALCAALRGAPPPCGHXXXXXXXXXXXXXXXXXXXXXXXXXGDARLKFVQLGQRPAGEAGGRAVAAACREMEGTVRVSTDPWPLPLKVTLLLCTALRLPHEAYARVFACLRTPVVRRVEADCG 550
            MLVLAPVPAARRDVDGVCQALKERAGPVGRLDLTHNVVSLQAALALADIIREHGVRELVLSGSACPAKDAQIAQVVQHLQSQRSCSTNGHQALRLLDLRNTNLGVSGSQSRSPLHHHMLSQIQAGGALASVRELNLSNSFIGGFSGNGATVSILAELLKRAPHLHTLDLSRNRLSGQAVETVVNALLRMCAARPVGAGMRALLLDWNNEMGNKGAFAAGHLLSRCRASMRKLSLASCGLREAAARALAAGASQTQSSHVSGGLDALSISAAHEAAQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAEPGCDVDLSCNHISATGLTFLAHALLHAALPVTALRLRSNDHIGDAAGDPVSALAAFVQALATAPRLRVLDLSGTRVPPQHLLHFAACLRDSWAAGRRPPRPPLAALNLSRCQVGVHNAQALCAALRGAPPPCGHXXXXXXXXXXXXXXXXXXXXXXXXXGDARLKFVQLGQRPAGEAGGRAVAAACREMEGTVRVSTDPWPLPLKVTLLLCTALRLPHEAYARVFACLRTPVVRRVEADCG
Sbjct:    1 MLVLAPVPAARRDVDGVCQALKERAGPVGRLDLTHNVVSLQAALALADIIREHGVRELVLSGSACPAKDAQIAQVVQHLQSQRSCSTNGHQALRLLDLRNTNLGVSGSQSRSPLHHHMLSQIQAGGALASVRELNLSNSFIGGFSGNGATVSILAELLKRAPHLHTLDLSRNRLSGQAVETVVNALLRMCAARPVGAGMRALLLDWNNEMGNKGAFAAGHLLSRCRASMRKLSLASCGLREAAARALAAGASQTQSSHVSGGLDALSISAAHEAAQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAEPGCDVDLSCNHISATGLTFLAHALLHAALPVTALRLRSNDHIGDAAGDPVSALAAFVQALATAPRLRVLDLSGTRVPPQHLLHFAACLRDSWAAGRRPPRPPLAALNLSRCQVGVHNAQALCAALRGAPPPCGHXXXXXXXXXXXXXXXXXXXXXXXXXGDARLKFVQLGQRPAGEAGGRAVAAACREMEGTVRVSTDPWPLPLKVTLLLCTALRLPHEAYARVFACLRTPVVRRVEADCG 550
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|338969 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836C755_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00368LRR_RI_2coord: 372..399
e-value: 18.0
score: 8.3
coord: 128..160
e-value: 23.0
score: 7.6
coord: 409..436
e-value: 27.0
score: 7.1
coord: 161..188
e-value: 15.0
score: 8.8
coord: 90..117
e-value: 94.0
score: 3.2
coord: 442..469
e-value: 0.16
score: 21.1
coord: 226..253
e-value: 1.4
score: 16.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 270..302
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 271..291
NoneNo IPR availablePANTHERPTHR24113RAN GTPASE-ACTIVATING PROTEIN 1coord: 92..252
coord: 315..500
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 314..494
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 28..251
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 311..504
e-value: 8.5E-22
score: 79.1
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 9..302
e-value: 2.5E-20
score: 74.1
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 314..330
e-value: 0.76
score: 10.0
coord: 162..180
e-value: 0.39
score: 10.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_94contigContig_94:111379..113031 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|338969mRNA_7933Tribonema minus UTEX_B_3156 mRNAContig_94 111379..113213 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|338969|MIX47732_8_39 ID=Trimin1|338969|MIX47732_8_39|Name=jgi.p|Trimin1|338969|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=551bp
MLVLAPVPAARRDVDGVCQALKERAGPVGRLDLTHNVVSLQAALALADII
REHGVRELVLSGSACPAKDAQIAQVVQHLQSQRSCSTNGHQALRLLDLRN
TNLGVSGSQSRSPLHHHMLSQIQAGGALASVRELNLSNSFIGGFSGNGAT
VSILAELLKRAPHLHTLDLSRNRLSGQAVETVVNALLRMCAARPVGAGMR
ALLLDWNNEMGNKGAFAAGHLLSRCRASMRKLSLASCGLREAAARALAAG
ASQTQSSHVSGGLDALSISAAHEAAQQQQQQQHQTEAAAEGANHNATAAA
SAAAAAPAEPGCDVDLSCNHISATGLTFLAHALLHAALPVTALRLRSNDH
IGDAAGDPVSALAAFVQALATAPRLRVLDLSGTRVPPQHLLHFAACLRDS
WAAGRRPPRPPLAALNLSRCQVGVHNAQALCAALRGAPPPCGHPLRVLCL
RQCDVGVGGAAALAQLLRGDARLKFVQLGQRPAGEAGGRAVAAACREMEG
TVRVSTDPWPLPLKVTLLLCTALRLPHEAYARVFACLRTPVVRRVEADCG
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt