Trimin1|338867|MIX47630_1_21 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|338867
Unique NameTrimin1|338867|MIX47630_1_21
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length233
Homology
BLAST of jgi.p|Trimin1|338867 vs. uniprot
Match: A0A835YJ13_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ13_9STRA)

HSP 1 Score: 457 bits (1177), Expect = 9.910e-163
Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 0
Query:    1 MTNKSLNPDWNSQSGGNRFKFLNKKSRARRVDVDVSHKVRTVGYLDGDTSVLLEGGEGGCFFQDELERCKQMNTTPPFKRFYYAVWPLVQSLAELLHHSAMVAAMLLKLIQDPATLGVAGEQLLQLLSVLARDLQSAFHPHFAPSKDVLAALLQGPAGDEPEAAGRVMRAVGYILKFNTRPLLADPAALRAYYAPLLGHRRDYVRRYAGDVRGGAAEAQAEGRARAAEPLEK 232
            MTNKSLNPDWNSQSGGNRFKFLNKKSRARRVDVDVSHKVRTVGYLDGDTSVLLEGGEGGCFFQDELERCKQMNTTPPFKRFYYAVWPLVQSLAELLHHSAMVAAMLLKLIQDPATLGVAGEQLLQLLSVLARDLQSAFHPHFAPSKDVLAALLQGPAGDEPEAAGRVMRAVGYILKFNTRPLLADPAALRAYYAPLLGHRRDYVRRYAGDVRGGAAEAQAEGRARAAEPLEK
Sbjct:    1 MTNKSLNPDWNSQSGGNRFKFLNKKSRARRVDVDVSHKVRTVGYLDGDTSVLLEGGEGGCFFQDELERCKQMNTTPPFKRFYYAVWPLVQSLAELLHHSAMVAAMLLKLIQDPATLGVAGEQLLQLLSVLARDLQSAFHPHFAPSKDVLAALLQGPAGDEPEAAGRVMRAVGYILKFNTRPLLADPAALRAYYAPLLGHRRDYVRRYAGDVRGGAAEAQAEGRARAAEPLEK 232          
BLAST of jgi.p|Trimin1|338867 vs. uniprot
Match: A0A835YZH5_9STRA (DRIM domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZH5_9STRA)

HSP 1 Score: 402 bits (1032), Expect = 1.310e-125
Identity = 201/211 (95.26%), Postives = 203/211 (96.21%), Query Frame = 0
Query:    1 MTNKSLNPDWNSQSGGNRFKFLNKKSRARRVDVDVSHKVRTVGYLDGDTSVLLEGGEGGCFFQDELERCKQMNTTPPFKRFYYAVWPLVQSLAELLHHSAMVAAMLLKLIQDPATLGVAGEQLLQLLSVLARDLQSAFHPHFAPSKDVLAALLQGPAGDEPEAAGRVMRAVGYILKFNTRPLLADPAALRAYYAPLLGHRRDYVRRYAGDV 211
            M NKSLNPDWNSQSGGNRFKFLNKKSRARRVDVDVSHKVRTVGYLDGDTSVL EGGEGGCFFQDELERCKQMNTTPPFKRFYYAVWPLVQSLAELLHHSA VAAMLLKLIQDPAT GVAGEQLLQLLSVLARDLQSAFHPHFAPS DVLAALLQGPAGDEPEAAGRVMRAVGYILKF+ RPLL DPAALRAYYAPLLGHRRDYVRRYAG+ 
Sbjct:    1 MANKSLNPDWNSQSGGNRFKFLNKKSRARRVDVDVSHKVRTVGYLDGDTSVLPEGGEGGCFFQDELERCKQMNTTPPFKRFYYAVWPLVQSLAELLHHSATVAAMLLKLIQDPATHGVAGEQLLQLLSVLARDLQSAFHPHFAPSMDVLAALLQGPAGDEPEAAGRVMRAVGYILKFDIRPLLEDPAALRAYYAPLLGHRRDYVRRYAGET 211          
BLAST of jgi.p|Trimin1|338867 vs. uniprot
Match: D8LFJ6_ECTSI (DRIM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFJ6_ECTSI)

HSP 1 Score: 224 bits (571), Expect = 1.150e-63
Identity = 116/198 (58.59%), Postives = 142/198 (71.72%), Query Frame = 0
Query:   11 NSQSGGNRFKFLNKKSRARRVDVDVSHKVRTVGYLDGDTSVLLEGGEGGCFFQDELERCKQMNTTPPFKRFYYAVWPLVQSLAELLHHSAMVAAMLLKLIQDPATLGVAGEQLLQLLSVLARDLQSAFHPHFAPSKDVLAALLQGPAGDEPEAAGRVMRAVGYILKFNTRPLLADPAALRAYYAPLLGHRRDYVRRYA 208
            N+  G NRFKF  K++RA+R+DVDV+HKVR  G+LD D +   E  EGG FFQ EL+R K++N TPPFKRFYY VWPLVQSL ELLHH+  V  MLL L++DP  +  AGE+ LQLLSVLARDLQS+F PHF      L  L+  P    PE  GRV+R +G++LKF  RPL  D AA+RA YAPLLGH+RD+ R+ A
Sbjct:   13 NTTGGSNRFKFQGKQARAKRIDVDVAHKVRAEGFLDADKAQNPEV-EGGSFFQQELDRSKELNVTPPFKRFYYKVWPLVQSLPELLHHAPAVVDMLLALLEDPVVVTQAGEETLQLLSVLARDLQSSFFPHFPRVSTALIGLIASP-DVSPEICGRVLRCLGFLLKFVARPLSKDMAAVRALYAPLLGHKRDFARKMA 208          
BLAST of jgi.p|Trimin1|338867 vs. uniprot
Match: A0A6H5JFX0_9PHAE (DRIM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFX0_9PHAE)

HSP 1 Score: 223 bits (568), Expect = 2.880e-63
Identity = 115/198 (58.08%), Postives = 142/198 (71.72%), Query Frame = 0
Query:   11 NSQSGGNRFKFLNKKSRARRVDVDVSHKVRTVGYLDGDTSVLLEGGEGGCFFQDELERCKQMNTTPPFKRFYYAVWPLVQSLAELLHHSAMVAAMLLKLIQDPATLGVAGEQLLQLLSVLARDLQSAFHPHFAPSKDVLAALLQGPAGDEPEAAGRVMRAVGYILKFNTRPLLADPAALRAYYAPLLGHRRDYVRRYA 208
            N+  G NRFKF  K++RA+R+DVDV+HKVR  G+LD D +   E  EGG FFQ EL+R K++N TPPFKRFYY VWPLVQSL ELLHH+  V  MLL L++DP  +  AGE+ LQLLSVLARDLQS+F PHF      L  L+  P    PE  GRV+R +G++LKF  RPL  D AA+RA Y+PLLGH+RD+ R+ A
Sbjct:   13 NTTGGSNRFKFQGKQARAKRIDVDVAHKVRAEGFLDADKAQNPEV-EGGSFFQQELDRSKELNVTPPFKRFYYKVWPLVQSLPELLHHAPAVVDMLLALLEDPVVVTQAGEETLQLLSVLARDLQSSFFPHFPRVSTALIGLIASP-DVSPEICGRVLRCLGFLLKFVARPLSKDMAAVRALYSPLLGHKRDFARKMA 208          
BLAST of jgi.p|Trimin1|338867 vs. uniprot
Match: A0A1Y1HR11_KLENI (Down-regulated in metastasis family protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HR11_KLENI)

HSP 1 Score: 99.8 bits (247), Expect = 2.600e-20
Identity = 73/208 (35.10%), Postives = 101/208 (48.56%), Query Frame = 0
Query:    4 KSLNPDWNSQSGGNRFKFLNKKSRARRVDVDVSHKVRTVGYLDGDTSVLLEGGEGGCFFQDELERCKQMNTTPPFKRFYYAVWPLVQSLAELLHHSAMVAAMLLKLIQDPATLGVAGEQLLQLLSVLARDLQSAFHPHFAPSKDVLAALLQGPAGDEPEAAGRVMRAVGYILKFNTRPLLADPAALRAYYAPLLGHRRDYVRRYAGDV 211
            KSLN  + S  G  RF F +   R   VDVDV   +  V +         E   G  FFQ+ L + +++NT   F   Y  V+PLVQSL +LL H   V   LL  +   A L +  E +L L++VL+RDL+  F P  AP       LL+G A  EP+   ++  +V Y+ K   + L  D      Y   +  HRRDYVR +A + 
Sbjct:    8 KSLNKSY-SGPGTKRFVFKSFAQRVASVDVDVFRSLAPVKF---------EPTAGTSFFQENLLQWRELNTAADFNLLYGEVYPLVQSLPQLLLHKKTVVRALLARMHIGALLSL--EPVLSLIAVLSRDLREDFLPFVAPFLGACLRLLEGGADREPDVLEQIFTSVSYVFKHLVKYLAKDLTQALKYTRLIRYHRRDYVRDFAAEA 203          
BLAST of jgi.p|Trimin1|338867 vs. uniprot
Match: A0A7R9YFR7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YFR7_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 4.540e-20
Identity = 73/202 (36.14%), Postives = 102/202 (50.50%), Query Frame = 0
Query:   18 RFKFLNKKSRARRVDVDVSHKVRTVGYLDGDT------SVLLEGGEGG--CFFQDELERCKQMNTTPPFKRFYYAVWPLVQSLAELLHHSAMVAAMLLKLIQDPATLGVAGEQLLQLLSVLARDLQSAFHPHFAP-SKDVLAALLQGPAGDEPEAAGRVMRAVGYILKFNTRPLLAD--PAALRAYYAPLLGHRRDYVRRYA 208
            R +F ++  + R+  V    K+R  G L  D       S  LE    G  C    EL+R +++N  P +KR YY +WPLVQSLA +LHH   +   LL L+  P+    A    LQL +V+A+DLQ    P F   SK +L A+      D+ E + +    +GY+L+F      A   PA L   Y P LGH RDY+R+ A
Sbjct:   28 RRRFRSEAYKLRKASVAPGEKLREEGGLRSDALDAGAVSAELESSFSGQRCALAVELDRQRELNIAPLWKRSYYELWPLVQSLAHVLHHRDAILERLLLLLAAPSPPCKATA--LQLAAVMAKDLQEELLPAFPKLSKAILTAV----DVDDAELSTKAFETLGYVLRFLAERSGAGKLPALLTPLYGPFLGHSRDYIRKLA 223          
BLAST of jgi.p|Trimin1|338867 vs. uniprot
Match: A0A2P6NS46_9EUKA (UTP20, small subunit (SSU) processome component n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NS46_9EUKA)

HSP 1 Score: 92.4 bits (228), Expect = 8.580e-18
Identity = 58/200 (29.00%), Postives = 102/200 (51.00%), Query Frame = 0
Query:   12 SQSGGNRFKFLNKKSRARRVDVDVSHKVRTVGYLDGDTSVLLEGGEGGCFFQDELERCKQMNTTPPFKRFYYAVWPLVQSLAELLHHSAMVAAMLLKLIQDPATLGVAGEQLLQLLSVLARDLQSAFHPHFAPSKDVLAALLQGPAGDEPEAAGRVMRAVGYILKFNTRPLLADPAALRAYYAPLLGHRRDYVRRYAGDV 211
            +   GNRFK+  +  +   VDVD+ HK+       G  ++ L       +F++ L +   +N T  F  F   V+P+  SLA++L+H   +  +L+K +Q P +L +A   LL L   L+RDLQ  F+P    +   L+ +L      +PE    + + +GY  K+  + ++ D   + +Y+  L+ HR DYV+ ++  V
Sbjct:  422 ASESGNRFKYQGRNEKIAEVDVDIFHKI-------GGITIKLSDPTSS-YFRESLHQWTDLNLTRDFLNFSTEVYPISNSLAQILYHKKDIHGILIKHLQVPDSLALA--PLLNLACQLSRDLQEEFYPMMEETIKTLSKVLDSKLL-QPEILESIFQTIGYFFKYLHKHVIQDINHVWSYFYSLVSHRDDYVKSWSAQV 610          
BLAST of jgi.p|Trimin1|338867 vs. uniprot
Match: A0A8J9RGR5_9CHLO (Probable small subunit processome component 20 homolog at N-terminal half n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RGR5_9CHLO)

HSP 1 Score: 87.4 bits (215), Expect = 3.470e-16
Identity = 71/189 (37.57%), Postives = 98/189 (51.85%), Query Frame = 0
Query:   27 RARRVDVDVSHK--VRTVGYLDGDTSVLLEGGEGGCFFQDELERCKQMNTTPPFKRFYYAVWPLVQSLAELLHHSAMVAAMLLKLIQDPATLGVAGEQLLQLLSVLARDLQSAFHPHFAPSKDVLAALLQGPAGDEPEAAGRVMRAVGYILKFNTRPLLADPAALRAYYAPLLGHRRDYVRRYAGDVRG 213
            R   VDVDV  +  VR+   L G TS          FFQ+EL++ ++++TT  F +   A+ PLVQ+L +L+HH   V  +LL  ++  A L +  E +L LLSVLARDL   F P+     + L  L++  A  EPE    V   +  + +   R L AD AA  A  A L  HR D+VRR A    G
Sbjct:   32 RVAEVDVDVYRRAPVRSEP-LPGATS----------FFQEELQKMRELHTTSDFLQAAAALNPLVQTLPQLVHHKDAVVEILLGAVRMDAALSL--EPILALLSVLARDLLDDFVPYVPRVINALTNLVEQGADREPELLQHVFGCLSSLFRHLVRQLAADLAAQLARTARLRYHRADHVRRLAAQSAG 207          
BLAST of jgi.p|Trimin1|338867 vs. uniprot
Match: A0A6P8IRZ2_ACTTE (small subunit processome component 20 homolog n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8IRZ2_ACTTE)

HSP 1 Score: 85.9 bits (211), Expect = 1.510e-15
Identity = 63/196 (32.14%), Postives = 102/196 (52.04%), Query Frame = 0
Query:   17 NRFKFLNKKSRARRVDVDVSHKVRTVGYLDGDTSVLLEGGEGGCFFQDELERCKQMNTTPPFKRFYYAVWPLVQSLAELLHHSAMVAAMLLK-LIQDPATLGVAGEQLLQLLSVLARDLQSAFHPHFAPSKDVLAALLQGPAGDEPEAAGRVMRAVGYILKFNTRPLLADPAALRAYYAPLLG-HRRDYVRRYAGD 210
            N FKF     R   + +D+SH+V              E  E   F  + L + +++N T  F+ F   + PLVQ+LA+L+HH   V A+L K L+Q+  +L +  E LL ++  ++RDLQS F+PHF    +V   LL     D  E    +  A+GY+ KF  R ++ D   +   Y+ LL  H++ Y++++A +
Sbjct:    8 NPFKFQXFSERIANIRLDISHRVE---------KRASEPEETETFCNEALNKWRELNCTVQFQEFCKEISPLVQTLAQLVHHEQTVIAILQKYLLQEGNSLAM--EPLLDVVVQISRDLQSDFYPHFKDFFNVFVTLLNRYXLDS-EILELIFTALGYLFKFLWRYMVKDIENVFKLYSSLLSTHQKPYIQQFAAE 191          
BLAST of jgi.p|Trimin1|338867 vs. uniprot
Match: A0A1J6I167_NICAT (DRIM domain-containing protein n=5 Tax=Nicotiana TaxID=4085 RepID=A0A1J6I167_NICAT)

HSP 1 Score: 82.8 bits (203), Expect = 1.720e-14
Identity = 59/200 (29.50%), Postives = 96/200 (48.00%), Query Frame = 0
Query:   11 NSQSGGNRFKFLNKKSRARRVDVDVSHKVRTVGYLDGDTSVLLEGGEGGCFFQDELERCKQMNTTPPFKRFYYAVWPLVQSLAELLHHSAMVAAMLLKLIQDPATLGVAGEQLLQLLSVLARDLQSAFHPHFAPSKDVLAALLQGPAGDEPEAAGRVMRAVGYILKFNTRPLLADPAALRAYYAPLLGHRRDYVRRYAGD 210
            N   G  RF F     R   VDVDV    R++  L  + S      EG  FF+D L   +++NT   F  FY  ++PLVQ+L +++ H   + A LL  +     L +  E +L+L++ L+RDL   F P      D LA LL+  A  EP+   ++ ++  +I+ +  + L+ D   +      L  + ++YV  +  D
Sbjct:   14 NKSPGRRRFTFKTFSERIEDVDVDV---YRSLDPLKAEPS------EGSSFFRDCLVEWRELNTAEDFISFYEEIFPLVQTLPQIILHKEQIVAKLLSRLDMKGRLSL--EPILRLIAALSRDLLENFLPFLQRIADSLACLLKSGADREPDIIEQIFKSWSFIMMYLQKYLVKDVVDVLKVTVKLRYYSKEYVHEFMAD 202          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|338867 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YJ13_9STRA9.910e-163100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YZH5_9STRA1.310e-12595.26DRIM domain-containing protein n=1 Tax=Tribonema m... [more]
D8LFJ6_ECTSI1.150e-6358.59DRIM domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JFX0_9PHAE2.880e-6358.08DRIM domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A1Y1HR11_KLENI2.600e-2035.10Down-regulated in metastasis family protein n=1 Ta... [more]
A0A7R9YFR7_9STRA4.540e-2036.14Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A2P6NS46_9EUKA8.580e-1829.00UTP20, small subunit (SSU) processome component n=... [more]
A0A8J9RGR5_9CHLO3.470e-1637.57Probable small subunit processome component 20 hom... [more]
A0A6P8IRZ2_ACTTE1.510e-1532.14small subunit processome component 20 homolog n=1 ... [more]
A0A1J6I167_NICAT1.720e-1429.50DRIM domain-containing protein n=5 Tax=Nicotiana T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR17695UNCHARACTERIZEDcoord: 15..208

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_93contigContig_93:491412..492110 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|338867mRNA_12065Tribonema minus UTEX_B_3156 mRNAContig_93 491412..492110 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|338867|MIX47630_1_21 ID=Trimin1|338867|MIX47630_1_21|Name=jgi.p|Trimin1|338867|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=233bp
MTNKSLNPDWNSQSGGNRFKFLNKKSRARRVDVDVSHKVRTVGYLDGDTS
VLLEGGEGGCFFQDELERCKQMNTTPPFKRFYYAVWPLVQSLAELLHHSA
MVAAMLLKLIQDPATLGVAGEQLLQLLSVLARDLQSAFHPHFAPSKDVLA
ALLQGPAGDEPEAAGRVMRAVGYILKFNTRPLLADPAALRAYYAPLLGHR
RDYVRRYAGDVRGGAAEAQAEGRARAAEPLEK*
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