Trimin1|338847|MIX47610_12_49 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|338847
Unique NameTrimin1|338847|MIX47610_12_49
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length307
Homology
BLAST of jgi.p|Trimin1|338847 vs. uniprot
Match: A0A835YH98_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YH98_9STRA)

HSP 1 Score: 508 bits (1307), Expect = 4.430e-180
Identity = 306/306 (100.00%), Postives = 306/306 (100.00%), Query Frame = 0
Query:    1 MAVRPNEPAAVTLSHRRHAAQVVQAIVAAMRIDVTHQDLQAAAATAIERIMEHNXXXXXXXXQQLLGAAAGNALMEALAVATRDGAAAPVLLALAALASHGVSAAQFLAAGAAEAIMAAVAKHRRGKPRLPYEDICRTEVQSAAMSAIAALAASAPADSARLCAAGACEAAVTTVPVYVNRLYAHSQYCDLLDKGLQALAALASAAESHSQAVALSLVQAGACEAATAALNMVLPPWSSEKMLTSALRTICGLSADAGAAARLRAAXXXXXVTSAIPRCSNCPDAARAAQLALDRLAAGAANVSSE 306
            MAVRPNEPAAVTLSHRRHAAQVVQAIVAAMRIDVTHQDLQAAAATAIERIMEHNXXXXXXXXQQLLGAAAGNALMEALAVATRDGAAAPVLLALAALASHGVSAAQFLAAGAAEAIMAAVAKHRRGKPRLPYEDICRTEVQSAAMSAIAALAASAPADSARLCAAGACEAAVTTVPVYVNRLYAHSQYCDLLDKGLQALAALASAAESHSQAVALSLVQAGACEAATAALNMVLPPWSSEKMLTSALRTICGLSADAGAAARLRAAXXXXXVTSAIPRCSNCPDAARAAQLALDRLAAGAANVSSE
Sbjct:    1 MAVRPNEPAAVTLSHRRHAAQVVQAIVAAMRIDVTHQDLQAAAATAIERIMEHNXXXXXXXXQQLLGAAAGNALMEALAVATRDGAAAPVLLALAALASHGVSAAQFLAAGAAEAIMAAVAKHRRGKPRLPYEDICRTEVQSAAMSAIAALAASAPADSARLCAAGACEAAVTTVPVYVNRLYAHSQYCDLLDKGLQALAALASAAESHSQAVALSLVQAGACEAATAALNMVLPPWSSEKMLTSALRTICGLSADAGAAARLRAAXXXXXVTSAIPRCSNCPDAARAAQLALDRLAAGAANVSSE 306          
BLAST of jgi.p|Trimin1|338847 vs. uniprot
Match: A0A835YKL3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKL3_9STRA)

HSP 1 Score: 323 bits (827), Expect = 1.120e-105
Identity = 205/283 (72.44%), Postives = 217/283 (76.68%), Query Frame = 0
Query:    1 MAVRPNEPAAVTLSHRRHAAQVVQAIVAAMRIDVTHQDLQAAAATAIERIMEHNXXXXXXXXQQLLGAAAGNALMEALAVATRDGAAAPVLLALAALASHGVSAAQFLAAGAAEAIMAAVAKHRRGKPRLPYEDICRTEVQSAAMSAIAALAASAPADSARLCAAGACEAAVTTVPVYVNRLYAHSQYCDLLDKGLQALAALASAAESHSQAVALSLVQAGACEAATAALNMVLPPWSSEKMLTSALRTICGLSADAGAAARLRAAXXXXXVTSAIPRCSNCP 283
            MAVRPNEPA  TL  RRHAAQVVQAIVAAMRIDVTHQDLQAAAATAIERIMEHN        QQLL A AGNALMEALAV+TR GAAA VLLA                AGAAEAIMA VAKH R KPR PYEDI RTE+ SAAMSAIAALA SAPADSA  CAAGACEAAVTTVP +V  LYA   + +LL++GL+ALAALASAAESHS  VALSLVQA ACEAATAALN+VL P  ++  LTSA+RTIC L ADA AAARL AA     V SAIPRCSNCP
Sbjct:  112 MAVRPNEPADATLLLRRHAAQVVQAIVAAMRIDVTHQDLQAAAATAIERIMEHNNNGGAAIAQQLLDAGAGNALMEALAVSTRHGAAAFVLLAXXXXXXXXXXXXXXXXAGAAEAIMAPVAKHCRDKPRSPYEDIRRTELLSAAMSAIAALAVSAPADSATPCAAGACEAAVTTVPEHVQILYARDIHRNLLERGLEALAALASAAESHSPVVALSLVQARACEAATAALNLVLTPCGNDATLTSAMRTICALCADASAAARLSAAGARESVISAIPRCSNCP 394          
BLAST of jgi.p|Trimin1|338847 vs. uniprot
Match: A0A835YYM8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYM8_9STRA)

HSP 1 Score: 235 bits (599), Expect = 1.030e-71
Identity = 174/303 (57.43%), Postives = 203/303 (67.00%), Query Frame = 0
Query:    8 PAAVTLSHRRHAAQVVQAIVAAMRIDVTHQDLQAAAATAIERIMEHNXXXXXXXX-QQLLGAAAGNALMEALAVATRDGAAAPVLLALAALASHGVSAAQFLAAGAAEAIMAAVAKHRRGKPRLPYEDICRTEVQSAAMSAIAALAASAPADSARLCAAGACEAAVTTVPVYVNRLYAHSQYCDLLDK-GLQALAALASAAESHSQAVALSLVQAGACEAATAALNMVL--PPWSSEKMLTSALRTICGLSADAGAAARLRAAXXXXXVTSAIPRCSNCPDAARAAQLALDRLAAGAANVSSE 306
            PA +TL  + HAAQ+ QA+VAAMR D+T QDLQAAAA+A+E I + N         QQ L A AG ALMEALA +T  GAA   L+ALAAL  HG SAA FLAAG AEAIMAAV +          +  C   V  AAM AIAALA  APADSAR  AAGAC+A V  V ++    +  +    L    GL+ALAALA+AAE+HSQ +ALSLV+AGACEAAT  LN VL  P  SS K LT+ L+ IC LSADA AAARL  A     V +AIPRCSN  DAA++A+LALDRLAAGAA+ SSE
Sbjct:   76 PADITLPQQLHAAQIAQAVVAAMRTDITQQDLQAAAASAVEGITQRNTGGVGAAIAQQFLDAGAGEALMEALAASTAHGAARHTLIALAALVHHGGSAAHFLAAGVAEAIMAAVDRLCTRGGTFSADSEC-VWVLLAAM-AIAALATKAPADSARFYAAGACDAVVRAVQLFKEYHHRRNDTSWLWHHPGLEALAALAAAAEAHSQDMALSLVEAGACEAATTFLNAVLLIPALSSSKALTTVLQAICALSADASAAARLNTAGAHKAVANAIPRCSNHSDAAQSARLALDRLAAGAADASSE 376          
BLAST of jgi.p|Trimin1|338847 vs. uniprot
Match: A0A835Z8E0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8E0_9STRA)

HSP 1 Score: 218 bits (555), Expect = 4.490e-65
Identity = 172/304 (56.58%), Postives = 197/304 (64.80%), Query Frame = 0
Query:    8 PAAVTLSHRRHAAQVVQAIVAAMRIDVTHQDLQAAAATAIERIMEHNXXXXXXXX-QQLLGAAAGNALMEALAVATRDGAAAPVLLALAALASHGVSAAQFLAAGAAEAIMAAVAKHRRGKPRLPYEDICRTEVQSAAMSAIAALAASAPADSARLCAAGACEAAVTTVPVYVNRLYAHSQYCDLLDKGLQALAALASAAESHSQAVALSLVQAGACEAATAALNMVL-PPWSSE--KMLTSALRTICGLSADAGAAARLRAAXXXXXVTSAIPRCSNCPDAA-RAAQLALDRLAAGAANVSSE 306
            PA VTL  + HAAQ  QA+ AAMR D+T QDLQ AAA+AIE I ++N         QQ L A  G  L+EAL  +T  G A   L AL ALA HG SAAQ ++A AA AIMAAV K       L    +C + V SAAM AIAALA  APA+SAR  AAGAC+A V  V ++ +     S +      GL+ALAALA+AAE+HSQ +ALSLVQAGACE ATA LN VL  P S    +MLTSAL+ IC LSADA AAARL AA     V SAIPRC    DAA RAAQLAL RLAAGAAN +SE
Sbjct:   71 PADVTLPQKLHAAQAAQAVAAAMRTDITQQDLQTAAASAIEGITQNNNGGVGAAIAQQFLDAGVGEVLIEALTASTAHGTARFTLKALTALAHHGGSAAQLMSAVAAAAIMAAVGKLCTRGGTLSAVFVCLS-VLSAAMWAIAALATKAPAESARFYAAGACQAVVRAVQLFKDVHRRSSWFWQ--HPGLEALAALAAAAEAHSQDMALSLVQAGACEVATAVLNAVLLVPLSDAGYRMLTSALQAICTLSADASAAARLSAAGAREAVASAIPRCREGDDAAARAAQLALHRLAAGAANAASE 371          
BLAST of jgi.p|Trimin1|338847 vs. uniprot
Match: A0A835YNT0_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNT0_9STRA)

HSP 1 Score: 188 bits (478), Expect = 1.370e-52
Identity = 143/232 (61.64%), Postives = 157/232 (67.67%), Query Frame = 0
Query:   76 EALAVATRDGAAAPVLLALAALASHGVSAAQFLAAGAAEAIMAAVAKH-RRGKPRLPYEDICRTEVQSAAMSAIAALAASAPADSARLCAAGACEAAVTTVPVYVNRLYAHSQYCDLLDKGLQALAALASAAESHSQAVALSLVQAGACEAATAALNMVL-PPWSSEKMLTSALRTICGLSADAGAAARLRAAXXXXXVTSAIPRCSNCPDAARAAQLALDRLAAGAANVSS 305
            EA+A ++  GAAA  L AL AL  HG SAAQ LAAG AEAIMAAV +   RG+   P     R  V SAAM AIAALA  APADSARL AAGAC+ AV  +       Y  S  C LLD  L+ LAAL +AA SHS AVALSLV AGACEAATA LN VL  P  S  +LTSALR ICGLSADA AAARL  A     V SAIPRCSN  DAA++A+LALDRLA GAA+ SS
Sbjct:  257 EAVAASSPYGAAAHTLNALTALVHHGGSAAQLLAAGGAEAIMAAVGRLCTRGRALSPVVQFGRARVLSAAMKAIAALATKAPADSARLSAAGACQVAVNALK------YNISDDC-LLDLSLKTLAALVTAAVSHSPAVALSLVTAGACEAATATLNAVLLSPSGSSNVLTSALRAICGLSADASAAARLNTAGAREAVASAIPRCSNHDDAAQSARLALDRLAVGAADASS 481          
BLAST of jgi.p|Trimin1|338847 vs. uniprot
Match: A0A835Z6I2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6I2_9STRA)

HSP 1 Score: 170 bits (431), Expect = 1.730e-48
Identity = 134/255 (52.55%), Postives = 154/255 (60.39%), Query Frame = 0
Query:    1 MAVRPNEPAAVTLSHRRHAAQVVQAIVAAMRIDVTHQDLQAAAATAIERIMEHNXXXXXXXXQQLLGAAAGNALMEALAVATRDGAAAPVLLALAALASHGVSAAQFLAAGAAEAIMAAVAKHRRGKPRLPYEDICRTEVQSAAMSAIAALAASAPADSARLCAAGACEAAVTTVPVYVNRLYAHSQYCD-----LLDKGLQALAALASAAESHSQAVALSLVQAGACEAATAALNMVL--PPWSSEKMLTSALR 248
            MAVR   P  +TL  R HAAQV QA+VAAMR ++T QDLQAAAA+AIER+ E +        QQ L A AGNALMEALA +T  GAA  +L AL ALA +  SAAQ LAAGAAE IMAA+AK                           +LA  APADSARL AAGACEA V  +             CD     L+   L+AL ALA+AAESHS AVALSLV+AGACEAATA LN VL  P  SS K++T  +R
Sbjct:    1 MAVRGYGPPDITLPQRLHAAQVAQAVVAAMRTEITQQDLQAAAASAIERMTERHNGNGATIAQQFLDADAGNALMEALAASTTGGAAPYMLQALTALADYRGSAAQLLAAGAAETIMAAIAK--------------------------LSLATKAPADSARLSAAGACEAVVEALK------------CDRSDDRLMALSLKALTALAAAAESHSSAVALSLVEAGACEAATATLNAVLLLPASSSSKVMTQRIR 217          
BLAST of jgi.p|Trimin1|338847 vs. uniprot
Match: A0A835YQI2_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQI2_9STRA)

HSP 1 Score: 139 bits (350), Expect = 1.060e-34
Identity = 104/180 (57.78%), Postives = 118/180 (65.56%), Query Frame = 0
Query:    1 MAVRPNEPAAVTLSHRRHAAQVVQAIVAAMRIDVTHQDLQAAAATAIERIMEHNXXXXXXXXQQLLGAAAGNALMEALAVATRDGAAAPVLLALAALASHGVSAAQFLAAGAAEAIMAAVAKHRRGKPRLPYEDICRTEVQSAAMSAIAALAASAPADSARLCAAGACEAAVTTVPVYVN 180
            MAV    P  +TL  R HAAQV QA+VAAMR DVT + LQ+AAATAIE + E +        QQ L A AGNALM ALA +T  GA +  L ALAALA +G SAAQ LAAG AEAIMAAV KH      L  +  C T V SAAMSAIAALAASAPADSARL   GACE     V ++++
Sbjct:  180 MAVCRFGPVDITLPQRLHAAQVAQAVVAAMRTDVTLEGLQSAAATAIESMTESSDGGGAAVAQQFLDAGAGNALMNALAASTASGATSDTLKALAALAQYGGSAAQLLAAGVAEAIMAAVDKHCVRGGVLSADFKC-TLVISAAMSAIAALAASAPADSARLSTVGACEVVARAVRLHMD 358          
BLAST of jgi.p|Trimin1|338847 vs. uniprot
Match: A0A835YIU1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIU1_9STRA)

HSP 1 Score: 133 bits (334), Expect = 2.210e-34
Identity = 102/175 (58.29%), Postives = 116/175 (66.29%), Query Frame = 0
Query:    1 MAVRPNEPAAVTLSHRRHAAQVVQAIVAAMRIDVTHQDLQAAAATAIERIMEHNXXXXXXXXQQLLGAAAGNALMEALAVATRDGAAAPVLLALAALASHGVSAAQFLAAGAAEAIMAAVAKH-RRGKPRLPYEDICRTEVQSAAMSAIAALAASAPADSARLCAAGACEAAVTT 174
            MAV   EPA  TL  R +AAQV QA+VAAMR DVT   LQAAAA AI  + E +        QQ + A AGNALM+ALA +   GAA+  L ALAALA +G SAAQ LAAG AEAIMAAV KH  RG  R+   D    +V   A+SAIAALAASAPADSARL  AGAC A V++
Sbjct:   13 MAVPCFEPADATLPQRLNAAQVAQAVVAAMRTDVTQAGLQAAAALAIRNMTERSDAGGAAIAQQFVDAGAGNALMDALAASAIRGAASDTLKALAALARYGGSAAQLLAAGVAEAIMAAVDKHCTRG--RMLSADYDGKQVLEPALSAIAALAASAPADSARLSMAGACNAVVSS 185          
BLAST of jgi.p|Trimin1|338847 vs. uniprot
Match: A0A835ZGT2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGT2_9STRA)

HSP 1 Score: 105 bits (262), Expect = 4.720e-22
Identity = 110/248 (44.35%), Postives = 142/248 (57.26%), Query Frame = 0
Query:    4 RPNEPAAVTLSHRRHAAQVVQAIVAAMRIDVTHQDLQAAAATAIERIMEHNXXXXXXXXQQLLGAAAGNALMEALAVATRDG-AAAPVLLALAALASHGVSAA--QFLAAGAAEAIMAAVAKH----RRGKPRLPYEDICRTEVQSAAMSAIAALAASAPADSARLCAAGACEAAVTTVPVYVNRLYAHSQYCD-----LLDKGLQALAALASAAE-----SHSQAVALSLVQAGACEAATAALNMVL 234
            R ++ AA+ L  R HAA V +AIVAA+R+DVT   LQ     A+  + +          QQLL A AG+ L++ LA +T     AA  L ALA LA +G  AA  + LAAGA EAIMAAVAKH      G  R       R  V  +A SA+AALAA +PA+ AR CAAGA  AAV  V + ++   A  Q  D     L D GL+A+ ALA+A +     S   + +++LV+AGA EAATAALN +L
Sbjct:   37 RGSQIAALQLWERLHAAHVSEAIVAALRVDVTQPGLQMVGTGAVSTLAQ--CLGGTPAVQQLLDAGAGDVLIKVLAASTAAYICAAATLSALAMLARNGGGAASERLLAAGADEAIMAAVAKHCEIEEGGTAR-------RAHVLWSAASAVAALAAHSPANGARFCAAGAAAAAVRAVQLSLDAQEA--QQLDGTAHLLRDFGLEAIGALAAAGDAARSGSEPGSESVALVEAGAREAATAALNALL 273          
BLAST of jgi.p|Trimin1|338847 vs. uniprot
Match: A0A835YGZ6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGZ6_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 3.720e-17
Identity = 69/117 (58.97%), Postives = 77/117 (65.81%), Query Frame = 0
Query:   64 QLLGAAAGNALMEALAVATRDGAAAPVLLALAALASHGVSAAQFLAAGAAEAIMAAVAKHRRGKPRLPYEDICRTEVQSAAMSAIAALAASAPADSARLCAAGACEAAVTTVPVYVN 180
            Q L A AGNALMEALA +T   AA+ +L  L ALA    +AAQ LAAG AEAIMAAV KH      L  +  C T V SAAM AIAALAASAPADSARL   GACE  VT V ++ +
Sbjct:   31 QFLNAGAGNALMEALAASTTGYAASHMLKGLTALAHDSGNAAQLLAAGVAEAIMAAVDKHCTRGRMLSADSKC-TWVLSAAMLAIAALAASAPADSARLSTTGACEVVVTAVRLHTD 146          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|338847 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A835YH98_9STRA4.430e-180100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YKL3_9STRA1.120e-10572.44Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YYM8_9STRA1.030e-7157.43Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z8E0_9STRA4.490e-6556.58Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YNT0_9STRA1.370e-5261.64Armadillo-type protein n=1 Tax=Tribonema minus Tax... [more]
A0A835Z6I2_9STRA1.730e-4852.55Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YQI2_9STRA1.060e-3457.78Armadillo-type protein n=1 Tax=Tribonema minus Tax... [more]
A0A835YIU1_9STRA2.210e-3458.29Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZGT2_9STRA4.720e-2244.35Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YGZ6_9STRA3.720e-1758.97Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 36..56
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 9..305
e-value: 7.6E-11
score: 43.1
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 18..300

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_93contigContig_93:344227..345147 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|338847mRNA_12054Tribonema minus UTEX_B_3156 mRNAContig_93 344183..345211 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|338847|MIX47610_12_49 ID=Trimin1|338847|MIX47610_12_49|Name=jgi.p|Trimin1|338847|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=307bp
MAVRPNEPAAVTLSHRRHAAQVVQAIVAAMRIDVTHQDLQAAAATAIERI
MEHNNNGGAAIAQQLLGAAAGNALMEALAVATRDGAAAPVLLALAALASH
GVSAAQFLAAGAAEAIMAAVAKHRRGKPRLPYEDICRTEVQSAAMSAIAA
LAASAPADSARLCAAGACEAAVTTVPVYVNRLYAHSQYCDLLDKGLQALA
ALASAAESHSQAVALSLVQAGACEAATAALNMVLPPWSSEKMLTSALRTI
CGLSADAGAAARLRAAGACEAVTSAIPRCSNCPDAARAAQLALDRLAAGA
ANVSSE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016024ARM-type_fold