Trimin1|338454|MIX47217_16_47 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|338454
Unique NameTrimin1|338454|MIX47217_16_47
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length595
Homology
BLAST of jgi.p|Trimin1|338454 vs. uniprot
Match: A0A836C722_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C722_9STRA)

HSP 1 Score: 971 bits (2511), Expect = 0.000e+0
Identity = 594/594 (100.00%), Postives = 594/594 (100.00%), Query Frame = 0
Query:    1 MEFAGQQHGSFHQLGAQVAGSNSNTSRSHTPHGDGDYSLLDEDRFSLFSSFFSPYSAAAPAAALASPWAREFLNIGNCGSTCSEGAYTSPPASSRSSSVGDLNDAATNMAEMMHKLDLCATAHRSPLNYGPCQHSDVPGGSASFFSEGAYATQPSSAQQRTSYAPVTRHHPQPQHLHSVGPQHAGSFRAATAADPHYNPHVTQPTRHLQQQQQQAYFRDGGDYLSPGKPDGHGGRYRPEAAAAAAADARTAELAAELRHRDYLAHAPITGHHHLSGAGVAXXXXXXXXLHARXXXXXXXXAADASDARRACEGAVVREAALILRDAGARSLRAVELANALRARLGTDALARARELHGGLLSLLERHPRVFRVDRIPKSDCVTLVAMPAPEDYGLFSAAXXXXXXXXXXPRRVEHMAGLRAEAXXXXXQVHARRRSFAEPLQEPQQPMQXXXXXXXXXQYLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALVTLTSDRFVPTQSWPVSPREDWPYVACVTDVLRAAGGSTTISKLRGLLRARLSSAATIKSVPLKAMLVAYAPPFALCGNRVALLPPSAAALRGSGGALR 594
            MEFAGQQHGSFHQLGAQVAGSNSNTSRSHTPHGDGDYSLLDEDRFSLFSSFFSPYSAAAPAAALASPWAREFLNIGNCGSTCSEGAYTSPPASSRSSSVGDLNDAATNMAEMMHKLDLCATAHRSPLNYGPCQHSDVPGGSASFFSEGAYATQPSSAQQRTSYAPVTRHHPQPQHLHSVGPQHAGSFRAATAADPHYNPHVTQPTRHLQQQQQQAYFRDGGDYLSPGKPDGHGGRYRPEAAAAAAADARTAELAAELRHRDYLAHAPITGHHHLSGAGVAXXXXXXXXLHARXXXXXXXXAADASDARRACEGAVVREAALILRDAGARSLRAVELANALRARLGTDALARARELHGGLLSLLERHPRVFRVDRIPKSDCVTLVAMPAPEDYGLFSAAXXXXXXXXXXPRRVEHMAGLRAEAXXXXXQVHARRRSFAEPLQEPQQPMQXXXXXXXXXQYLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALVTLTSDRFVPTQSWPVSPREDWPYVACVTDVLRAAGGSTTISKLRGLLRARLSSAATIKSVPLKAMLVAYAPPFALCGNRVALLPPSAAALRGSGGALR
Sbjct:    1 MEFAGQQHGSFHQLGAQVAGSNSNTSRSHTPHGDGDYSLLDEDRFSLFSSFFSPYSAAAPAAALASPWAREFLNIGNCGSTCSEGAYTSPPASSRSSSVGDLNDAATNMAEMMHKLDLCATAHRSPLNYGPCQHSDVPGGSASFFSEGAYATQPSSAQQRTSYAPVTRHHPQPQHLHSVGPQHAGSFRAATAADPHYNPHVTQPTRHLQQQQQQAYFRDGGDYLSPGKPDGHGGRYRPEAAAAAAADARTAELAAELRHRDYLAHAPITGHHHLSGAGVAXXXXXXXXLHARXXXXXXXXAADASDARRACEGAVVREAALILRDAGARSLRAVELANALRARLGTDALARARELHGGLLSLLERHPRVFRVDRIPKSDCVTLVAMPAPEDYGLFSAAXXXXXXXXXXPRRVEHMAGLRAEAXXXXXQVHARRRSFAEPLQEPQQPMQXXXXXXXXXQYLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALVTLTSDRFVPTQSWPVSPREDWPYVACVTDVLRAAGGSTTISKLRGLLRARLSSAATIKSVPLKAMLVAYAPPFALCGNRVALLPPSAAALRGSGGALR 594          
BLAST of jgi.p|Trimin1|338454 vs. uniprot
Match: A0A7S2D0S3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D0S3_9STRA)

HSP 1 Score: 120 bits (301), Expect = 2.670e-25
Identity = 105/268 (39.18%), Postives = 121/268 (45.15%), Query Frame = 0
Query:  312 EGAVVREAALILRDAGARSLRAVELANALRARLGTDALARARELHGGLLSLLERHPRVFRVDRIPKSDCVTLVAMPAPEDYGLFSAAXXXXXXXXXXPRRVEHMAGLRAEAXXXXXQVHARRRSFAEPLQEPQQPMQXXXXXXXXXQYLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALVTLTSDRFVPTQSWPVSPREDWPYVACVTDVLRAAGGSTTISKLRGLLRARLSSAATIKSVPLKAMLVAYAPPFALCGNRVALL 579
            E AVV     IL  A  ++LRAVELAN LR R G   L R RELHGGLL+LLE++P  F V RIPKSDCV LV     E   L+  A        XX              XXX    H    S       P              Q  R                                 L  LTS+ FVPTQ W   PR D PYV  VTD LRA GGS T SKLR L++ +L+ A T+KSV L+  L AY   F++ G RVAL+
Sbjct:  241 EAAVVALTREILTKAANKNLRAVELANTLRGRHGPQILTRVRELHGGLLTLLEKYPSDFEVQRIPKSDCVRLVTK---EPVHLYPCADEEGRTTQXXXXXXXXXXXXXXXXXXXRPPTHGPP-SLNTSTTRPHASSLADEPLATLGQLSRLSLETTDVRGTLDGPHTESSGCPI---------LELLTSETFVPTQKWCRDPRYDGPYVKLVTDQLRAQGGSVTFSKLRSLMKKQLNEARTVKSVSLRCFLEAYNDCFSMSGRRVALI 495          
BLAST of jgi.p|Trimin1|338454 vs. uniprot
Match: A0A4D9CUF1_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CUF1_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 4.600e-15
Identity = 49/84 (58.33%), Postives = 60/84 (71.43%), Query Frame = 0
Query:  495 LVTLTSDRFVPTQSWPVSPREDWPYVACVTDVLRAAGGSTTISKLRGLLRARLSSAATIKSVPLKAMLVAYAPPFALCGNRVAL 578
            L  LT++ FVPTQ+WP+ P  D  YV  V + LRA GG+TT+SKLRGLL+ +L S  TIKSVPLKA L AY+  FAL  N V+L
Sbjct: 1635 LQILTNNHFVPTQAWPLEPLRDAGYVTVVAEELRAVGGTTTVSKLRGLLKHKLGSKETIKSVPLKAFLQAYSSVFALHRNHVSL 1718          
BLAST of jgi.p|Trimin1|338454 vs. uniprot
Match: A0A7S3HPA9_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HPA9_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 2.070e-14
Identity = 51/80 (63.75%), Postives = 60/80 (75.00%), Query Frame = 0
Query:  312 EGAVVREAALILRDAGARSLRAVELANALRARLGTDALARARELHGGLLSLLERHPRVFRVDRIPKSDCVTLVAMPAPED 391
            EGAV+R    IL  A  RSL+AVELAN LRAR+GT++LAR RE  GGLLSLLE+H   FRVDRIPK+D VTL++    ED
Sbjct:  579 EGAVLRSCREILAGAADRSLKAVELANTLRARVGTESLARVREQWGGLLSLLEKHGAHFRVDRIPKNDKVTLISNDGDED 658          
BLAST of jgi.p|Trimin1|338454 vs. uniprot
Match: W7TU76_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TU76_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 2.990e-14
Identity = 48/70 (68.57%), Postives = 55/70 (78.57%), Query Frame = 0
Query:  315 VVREAALILRDAGARSLRAVELANALRARLGTDALARARELHGGLLSLLERHPRVFRVDRIPKSDCVTLV 384
            VVR    ILR+A   +L+AVELAN LRARLGT  LA+ RE +GGLL LLERHP  FRVDRIPK+DCVTL+
Sbjct:  591 VVRATGEILRNAANYALKAVELANTLRARLGTKVLAKVRERYGGLLFLLERHPSFFRVDRIPKNDCVTLL 660          
BLAST of jgi.p|Trimin1|338454 vs. uniprot
Match: A0A7S4DGC6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DGC6_HETAK)

HSP 1 Score: 76.3 bits (186), Expect = 2.190e-12
Identity = 44/80 (55.00%), Postives = 56/80 (70.00%), Query Frame = 0
Query:  498 LTSDRFVPTQSWPVSPREDWPYVACVTDVLRAA-GGSTTISKLRGLLRARLSSAATIKSVPLKAMLVAYAPPFALCGNRV 576
            LTS++ VPT++W  +   D PYV  V ++L  A G S T+SKLRGLLRARL S  T+KSVPLKA+L AY   FA+  +RV
Sbjct:   78 LTSEKRVPTKAWVANFERDLPYVRAVQELLLGARGASLTVSKLRGLLRARLRSPQTVKSVPLKALLAAYPNLFAVRSHRV 157          
BLAST of jgi.p|Trimin1|338454 vs. uniprot
Match: A0A7S4EE30_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EE30_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 4.280e-12
Identity = 86/278 (30.94%), Postives = 112/278 (40.29%), Query Frame = 0
Query:  301 AADASDARRACEGAVVREAALILRDAGARSLRAVELANALRARLGTDALARARELHGGLLSLLERHPRVFRVDRIPKSDCVTLVAMPAPEDYGLFSAAXXXXXXXXXXPRRVEHMAGLRAEAXXXXXQVHARRRSFAEPLQEPQQPMQXXXXXXXXXQYLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALVTLTSDRFVPTQSWPVSPREDWPYVACVTDVLRAAGGS-TTISKLRGLLRARLSSAATIKSVPLKAMLVAYAPPFALCGNRVA 577
            AA    A R  E AVVRE   IL  A   +L AV+L+NALRARLG  AL+R R  HGGLL+ LE+     RV R+PK D VTL    AP +                 P+ VE    +  +      Q     R      Q+P              Q L                                  L  L ++ + PT  WP     D   V  V + LRA     +T+ K+R  LR   +  +++KSVPL+A+L AY   F + G  VA
Sbjct:  218 AAPVERATREDEAAVVREVVNILASASENALTAVDLSNALRARLGVGALSRVRASHGGLLTFLEKSAGRVRVVRVPKHDVVTL----APVESTPVMPGALRAEAAVFSPQFVEPAVPVVDDGKPAPKQCIGPAR------QKPMGASSLFPAPPLFPQQLSQGCQRQ---------------------------LARLAAEDYAPTMPWPRDAVHDQGIVRTVLECLRAQSPRPSTLHKIRAYLRRVYALQSSVKSVPLRALLTAYPQLFVIDGTSVA 458          
BLAST of jgi.p|Trimin1|338454 vs. uniprot
Match: A0A7R9Y9G7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y9G7_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 6.040e-11
Identity = 50/101 (49.50%), Postives = 61/101 (60.40%), Query Frame = 0
Query:  301 AADASDARRACEGAVVREAALILRDAGARSLRAVELANALRARLGTDALARARELHGGLLSLLERHPRVFRVDRIPKSDCVTLV----AMPAPEDYGLFSA 397
            AA   D R + +  V   A  IL+ A    L+AVELAN +R+RLGTD L+  R+  GGLLSLLE  P +F V RIPKSD VTL     A PAP+  G  S+
Sbjct:   54 AAPQVDERCSLQEQVTMTAENILQSAAGCQLKAVELANTIRSRLGTDTLSAIRKQFGGLLSLLESQPDIFIVRRIPKSDIVTLRNPLRAKPAPQQQGQASS 154          
BLAST of jgi.p|Trimin1|338454 vs. uniprot
Match: A0A812VV75_SYMMI (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812VV75_SYMMI)

HSP 1 Score: 67.0 bits (162), Expect = 2.160e-8
Identity = 38/74 (51.35%), Postives = 50/74 (67.57%), Query Frame = 0
Query:  312 EGAVVREAALILRDAGARSLRAVELANALRARLGTDALARARELHGGLLSLLERHPRVFRVDRIPKSDCVTLVA 385
            E A+ R A  IL +   + L++VELANALR R+G DAL R + L+GGLL LLE +   F V RIPK+D V L++
Sbjct:   34 EEAIYRNAQAILSETANKCLKSVELANALRDRIGKDALQRTKNLYGGLLVLLELYKETFVVHRIPKNDMVELIS 107          
BLAST of jgi.p|Trimin1|338454 vs. uniprot
Match: A0A7S3JMV8_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JMV8_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 4.120e-8
Identity = 39/75 (52.00%), Postives = 48/75 (64.00%), Query Frame = 0
Query:  315 VVREAALILRDAGARSLRAVELANALRARLGTDALARARELHGGLLSLLERHPRVFRVDRIPKSDCVTLVAMPAP 389
            V+R    IL  A   +L+AV+LANALR R+G  AL R R+  GGLLSLLE+H  + RV R+PK D V LV    P
Sbjct:  185 VIRHTREILEAASEHALKAVDLANALRNRVGVAALGRIRQTQGGLLSLLEQHKDIVRVQRVPKHDVVYLVTKKPP 259          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|338454 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A836C722_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2D0S3_9STRA2.670e-2539.18Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A4D9CUF1_9STRA4.600e-1558.33Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S3HPA9_9STRA2.070e-1463.75Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
W7TU76_9STRA2.990e-1468.57Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
A0A7S4DGC6_HETAK2.190e-1255.00Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S4EE30_9STRA4.280e-1230.94Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A7R9Y9G7_9STRA6.040e-1149.50Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A812VV75_SYMMI2.160e-851.35Hypothetical protein (Fragment) n=1 Tax=Symbiodini... [more]
A0A7S3JMV8_9STRA4.120e-852.00Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 451..499
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 202..218
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 12..36
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 153..168
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 12..32
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 153..218
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 433..499

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_91contigContig_91:386172..387956 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|338454mRNA_13508Tribonema minus UTEX_B_3156 mRNAContig_91 386172..387956 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|338454|MIX47217_16_47 ID=Trimin1|338454|MIX47217_16_47|Name=jgi.p|Trimin1|338454|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=595bp
MEFAGQQHGSFHQLGAQVAGSNSNTSRSHTPHGDGDYSLLDEDRFSLFSS
FFSPYSAAAPAAALASPWAREFLNIGNCGSTCSEGAYTSPPASSRSSSVG
DLNDAATNMAEMMHKLDLCATAHRSPLNYGPCQHSDVPGGSASFFSEGAY
ATQPSSAQQRTSYAPVTRHHPQPQHLHSVGPQHAGSFRAATAADPHYNPH
VTQPTRHLQQQQQQAYFRDGGDYLSPGKPDGHGGRYRPEAAAAAAADART
AELAAELRHRDYLAHAPITGHHHLSGAGVAAAAQQQQPLHARAAAAAAAV
AADASDARRACEGAVVREAALILRDAGARSLRAVELANALRARLGTDALA
RARELHGGLLSLLERHPRVFRVDRIPKSDCVTLVAMPAPEDYGLFSAAAA
AAAAAAAAPRRVEHMAGLRAEAAAAAAQVHARRRSFAEPLQEPQQPMQQA
PPQEHPAQYLRQQQQQQQQLAAPAGGSSSGGSSSSALPPPPSSALVTLTS
DRFVPTQSWPVSPREDWPYVACVTDVLRAAGGSTTISKLRGLLRARLSSA
ATIKSVPLKAMLVAYAPPFALCGNRVALLPPSAAALRGSGGALR*
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