Trimin1|338267|MIX47030_8_34 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|338267
Unique NameTrimin1|338267|MIX47030_8_34
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length417
Homology
BLAST of jgi.p|Trimin1|338267 vs. uniprot
Match: A0A836C8B0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8B0_9STRA)

HSP 1 Score: 648 bits (1672), Expect = 5.070e-232
Identity = 416/416 (100.00%), Postives = 416/416 (100.00%), Query Frame = 0
Query:    1 MLSDPQCALAGLVTTALAAAIAAWRLLVVLRQVWRYGGWRRVLAEPFSKDAYEDLDRQPHHYATQDQTLPQEESLLPQRAMFHVLVFLCLAVEVPVYAYHYVTLRGQDVSFEVGRDLYALHLTSYLLLCAAFCIIVMLWSSVASFEPSAWLLLANRLLLVLCVLYFLVTAVAVGRCLCEASSSQSYFTSLPFITFCAFSIGALLLLAACFLVLGCLMQQRICSALGGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTGTVLRLNAVVLTCFVCFSARALLLVRLLRLETAGADALGGWTRWQQEVYVEWIPNVVPCLALLYLMRGDVAREGRGLGGAGDGAXXXXXXXXXXXXXXXXXXXXXXXATAEAAELLERGDETPRRNVMNGHHRQYGAHR 416
            MLSDPQCALAGLVTTALAAAIAAWRLLVVLRQVWRYGGWRRVLAEPFSKDAYEDLDRQPHHYATQDQTLPQEESLLPQRAMFHVLVFLCLAVEVPVYAYHYVTLRGQDVSFEVGRDLYALHLTSYLLLCAAFCIIVMLWSSVASFEPSAWLLLANRLLLVLCVLYFLVTAVAVGRCLCEASSSQSYFTSLPFITFCAFSIGALLLLAACFLVLGCLMQQRICSALGGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTGTVLRLNAVVLTCFVCFSARALLLVRLLRLETAGADALGGWTRWQQEVYVEWIPNVVPCLALLYLMRGDVAREGRGLGGAGDGAXXXXXXXXXXXXXXXXXXXXXXXATAEAAELLERGDETPRRNVMNGHHRQYGAHR
Sbjct:    1 MLSDPQCALAGLVTTALAAAIAAWRLLVVLRQVWRYGGWRRVLAEPFSKDAYEDLDRQPHHYATQDQTLPQEESLLPQRAMFHVLVFLCLAVEVPVYAYHYVTLRGQDVSFEVGRDLYALHLTSYLLLCAAFCIIVMLWSSVASFEPSAWLLLANRLLLVLCVLYFLVTAVAVGRCLCEASSSQSYFTSLPFITFCAFSIGALLLLAACFLVLGCLMQQRICSALGGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTGTVLRLNAVVLTCFVCFSARALLLVRLLRLETAGADALGGWTRWQQEVYVEWIPNVVPCLALLYLMRGDVAREGRGLGGAGDGAXXXXXXXXXXXXXXXXXXXXXXXATAEAAELLERGDETPRRNVMNGHHRQYGAHR 416          
BLAST of jgi.p|Trimin1|338267 vs. uniprot
Match: D8LN17_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN17_ECTSI)

HSP 1 Score: 182 bits (462), Expect = 4.150e-50
Identity = 117/289 (40.48%), Postives = 157/289 (54.33%), Query Frame = 0
Query:   60 HHYATQDQTLPQEESLLPQRAMFHVLVFLCLAVEVPVYAYHYVTLRGQDVSFEVG-RDLYALHLTSYLLLCAAFCIIVMLWSSVASFEPSAWLLLANRLLLVLCVLYFLVTAVAVGRCLCEASSSQSYFTSLPFITFCAFSIGALLLLAACFLVLGCLMQQRICSALGGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTGTVLRLNAVVLTCFVCFSARALLLVRLLRLETAGADA---LGGWTRWQQEVYVEWIPNVVPCLALLYLMR 344
            H  AT    +     ++P   +FHVLVFLCLAVEVPVYA  +++  G  V    G R LYALH+TSYLLL  AF ++V LW+ VA FEP+    L NR ++ LCV Y LVT +AV  CL    + + + +S  F+ FCA+SI  LLLL A FLVLGCL+QQRIC  L                                                  LT  ++RLN V+L CF CF+ RAL+L  L++ +  G ++     GW R +Q++ +EW  +V+PC+A+LYLMR
Sbjct:   55 HLQATDADRVASSRVIVPS-LLFHVLVFLCLAVEVPVYACRWLSSSGIAVGLVQGDRSLYALHMTSYLLLFMAFSVVVTLWNDVAVFEPNECTALMNRSMVALCVCYVLVTGIAVSVCL-GVGNVKYFLSSFAFLLFCAYSIAVLLLLGASFLVLGCLLQQRICRVL------------------------------------------VTGSCTARLTARIVRLNVVMLACFTCFTMRALMLAGLIQAQAEGEESGNYASGWKRREQDMRLEWALHVIPCVAMLYLMR 299          
BLAST of jgi.p|Trimin1|338267 vs. uniprot
Match: A0A7S3XM64_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XM64_HETAK)

HSP 1 Score: 101 bits (251), Expect = 3.090e-20
Identity = 82/283 (28.98%), Postives = 130/283 (45.94%), Query Frame = 0
Query:   75 LLPQRAMFHVLVFLCLAVEVPVYA-YHYVTLRGQDVSFEVGRD-LYALHLTSYLLLCAAFCIIVMLWSSVASFEP-SAWLLLANRLLLVLCVLYFLVTAVAVGRCLCEASSSQSYFTSLPFITFCAFSIGALLLLAACFLVLGCLMQQRICSALGGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTGTVLRLNAVVLTCFVCFSARALLLVRLLRLETAGADALG----------GWTRWQQEVYVEWIPNVVPCLALLYLMR 344
            ++ Q+ +FH L+ L L +++P+Y  Y     +G++ S E   + LY +++ SY LL  AFC+++ LW+S+  F   S W+L+  R L+ +C+LY L +  A   C+  +SS  S+  S  ++ F    IG L  L+  FL++GC++Q RIC AL                                                     TV RLN V+  C + F+ RA LL+  L      AD +               W   V  EW+P++ PC+AL+YL+R
Sbjct:   64 VVQQKLLFHQLILLSLMLQIPLYVCYAIAGSQGEEDSSERYFEYLYPVNIMSYWLLFCAFCLVINLWASLVIFNTGSRWILVLRRSLVAICILYALASMYACLDCI-FSSSLWSWLESGTYVLFDFCCIGVLTFLSGAFLIVGCMLQGRICRALAPQERGRPRFW-----------------------------------------ATVARLNGVIFVCTISFAMRAALLLASLAAGAPYADTVSPAAAAPPAALSVETWL--VLAEWVPHLAPCIALMYLLR 302          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|338267 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A836C8B0_9STRA5.070e-232100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LN17_ECTSI4.150e-5040.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3XM64_HETAK3.090e-2028.98Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 391..416
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 391..405

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_90contigContig_90:412750..414000 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|338267mRNA_11449Tribonema minus UTEX_B_3156 mRNAContig_90 412750..414000 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|338267|MIX47030_8_34 ID=Trimin1|338267|MIX47030_8_34|Name=jgi.p|Trimin1|338267|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=417bp
MLSDPQCALAGLVTTALAAAIAAWRLLVVLRQVWRYGGWRRVLAEPFSKD
AYEDLDRQPHHYATQDQTLPQEESLLPQRAMFHVLVFLCLAVEVPVYAYH
YVTLRGQDVSFEVGRDLYALHLTSYLLLCAAFCIIVMLWSSVASFEPSAW
LLLANRLLLVLCVLYFLVTAVAVGRCLCEASSSQSYFTSLPFITFCAFSI
GALLLLAACFLVLGCLMQQRICSALGGPAAAVAAAASNGSASAVGGEKRG
ARRWWQWCRSSATAAAGSGGGGGGVLTGTVLRLNAVVLTCFVCFSARALL
LVRLLRLETAGADALGGWTRWQQEVYVEWIPNVVPCLALLYLMRGDVARE
GRGLGGAGDGAAAAAAAAAAGAAAGGARRGAAGGATAEAAELLERGDETP
RRNVMNGHHRQYGAHR*
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