Trimin1|338234|MIX46997_18_21 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|338234
Unique NameTrimin1|338234|MIX46997_18_21
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length617
Homology
BLAST of jgi.p|Trimin1|338234 vs. uniprot
Match: A0A836C7G9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7G9_9STRA)

HSP 1 Score: 1109 bits (2868), Expect = 0.000e+0
Identity = 616/616 (100.00%), Postives = 616/616 (100.00%), Query Frame = 0
Query:    1 MRRARYAVATGSHGPPPSLIEVASVMNDVFEPLDASAACLQHGALQLVRDGLAQSDRSTRALSCELARLLTRHPTPAVTADAELMAAVLRGAAAQMDEWLEGLGGEGEGAAVARARAELAQTYGAAAALQALAQLLNAGGVEAAATLDRDGVAQLTRLVAEAVPAARWRQADMFGVEHGHGSLDQLDALYRPVAVTATGRCRRPPPQAAATYIPWWCKRAAPLPLLLTCELTASDRRPVSQVLLLKHVLSCRSHTSVAHTSSAVALLRAAAFHPSVRRCQKLDLAGCAVLLALARSPRTVGLLMDEVVIATLVDTFSAYDADGVWASGLAPPWKLAAQALRRMADAFLKRAVAEPGCGGTDPADGSTPTALAYTEANDARVREMLASLPPFSSRSWQLSAALEQPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPVGRCEGVLGVAAHDKYNRCNRQEHVTAICSNTPVPRLSTCAQSTATAAALALPWGAARAYWAWRRGARRHAHLALPRPPLLRAGLTAMAGAVAAMALYEGGLRTNNWLLWRRSAPSVNRQVAFETALTAAQGVCLFALLRAAPYCLLPAAAGLYMFEEVGWSYTDPALIQSLG 616
            MRRARYAVATGSHGPPPSLIEVASVMNDVFEPLDASAACLQHGALQLVRDGLAQSDRSTRALSCELARLLTRHPTPAVTADAELMAAVLRGAAAQMDEWLEGLGGEGEGAAVARARAELAQTYGAAAALQALAQLLNAGGVEAAATLDRDGVAQLTRLVAEAVPAARWRQADMFGVEHGHGSLDQLDALYRPVAVTATGRCRRPPPQAAATYIPWWCKRAAPLPLLLTCELTASDRRPVSQVLLLKHVLSCRSHTSVAHTSSAVALLRAAAFHPSVRRCQKLDLAGCAVLLALARSPRTVGLLMDEVVIATLVDTFSAYDADGVWASGLAPPWKLAAQALRRMADAFLKRAVAEPGCGGTDPADGSTPTALAYTEANDARVREMLASLPPFSSRSWQLSAALEQPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPVGRCEGVLGVAAHDKYNRCNRQEHVTAICSNTPVPRLSTCAQSTATAAALALPWGAARAYWAWRRGARRHAHLALPRPPLLRAGLTAMAGAVAAMALYEGGLRTNNWLLWRRSAPSVNRQVAFETALTAAQGVCLFALLRAAPYCLLPAAAGLYMFEEVGWSYTDPALIQSLG
Sbjct:    1 MRRARYAVATGSHGPPPSLIEVASVMNDVFEPLDASAACLQHGALQLVRDGLAQSDRSTRALSCELARLLTRHPTPAVTADAELMAAVLRGAAAQMDEWLEGLGGEGEGAAVARARAELAQTYGAAAALQALAQLLNAGGVEAAATLDRDGVAQLTRLVAEAVPAARWRQADMFGVEHGHGSLDQLDALYRPVAVTATGRCRRPPPQAAATYIPWWCKRAAPLPLLLTCELTASDRRPVSQVLLLKHVLSCRSHTSVAHTSSAVALLRAAAFHPSVRRCQKLDLAGCAVLLALARSPRTVGLLMDEVVIATLVDTFSAYDADGVWASGLAPPWKLAAQALRRMADAFLKRAVAEPGCGGTDPADGSTPTALAYTEANDARVREMLASLPPFSSRSWQLSAALEQPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPVGRCEGVLGVAAHDKYNRCNRQEHVTAICSNTPVPRLSTCAQSTATAAALALPWGAARAYWAWRRGARRHAHLALPRPPLLRAGLTAMAGAVAAMALYEGGLRTNNWLLWRRSAPSVNRQVAFETALTAAQGVCLFALLRAAPYCLLPAAAGLYMFEEVGWSYTDPALIQSLG 616          
BLAST of jgi.p|Trimin1|338234 vs. uniprot
Match: A0A835ZG11_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG11_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 2.330e-13
Identity = 115/402 (28.61%), Postives = 155/402 (38.56%), Query Frame = 0
Query:    2 RRARYAVATGSHGPPPSLIEVA-SVMNDVFEPLDASAACLQHGALQLVRDGLAQSDRSTRALSCELARLLTRHPTPAVTADAELMAAVLRGAAAQMDEWLEGLGGEGEGAAVARARAELAQTYGAAAALQALAQLLNAGGVEAAATLDRDGVAQLTRLVAEAVPAARWRQADMFGVEHGHGSLDQLDALYRPVAVTATGRCRRPPPQAAATYIPWWCKRAAPLPLLLTCELTASDRRPVSQVLLLKHVLSCRSHTSVAHTSSAVALLRAAAFHPSVRRCQKLDLAGCAVLLALARSPRTVGLLMDEVVIATLVDTFSAYDADGVWASGLAPPWKLAAQALRRMADAFLKRAVAEPGCGGTDPADGSTPTALAYTEANDARVREMLASLPPFSSRSWQLSAAL 402
            R+ R A+A GS   PPSL++ + S M  +   LD +A      AL +++  +   + + +AL  ELARL+T      +  DA L AAV+  A+ Q+   L+GLG        + +R EL Q +GA AALQ +AQLL  G                                                                                        TC             LL  H L   +HT     +  V LL A       +  + L  AGC +LL LA SP TVGLLM E V+  L D          +A G     K+A  ALR++  A+LKRA        T       PTALA TE N A V+E+L  LP +++ SW L   L
Sbjct:   87 RQTRNALAAGSSETPPSLVQASCSYMTSM---LDRTACFRNQDALPMIQHSITSQNPTNKALGSELARLVTLRSADLIAKDAMLTAAVVDAASTQLVALLKGLGAMAADFP-SPSRQELVQMFGATAALQTIAQLLQEG----------------------------------------------------------------------------------------TC-------------LLPMHYLKGTTHT----INRLVCLLVA-------QTVKTLCTAGCDLLLELASSPETVGLLMSEKVVHALSDV--------AFADGDIISQKMAQSALRQVGAAYLKRAAMVQQPDDTTLGGAPGPTALALTERNRALVQELLDRLP-YTTGSWNLDVDL 363          
BLAST of jgi.p|Trimin1|338234 vs. uniprot
Match: A0A835ZJ04_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJ04_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 2.450e-12
Identity = 115/384 (29.95%), Postives = 153/384 (39.84%), Query Frame = 0
Query:  235 DRRPVSQVLLLKHVLSCRSHTSVAHT----SSAVALLRAAAFHPSVRRCQK-LDLAGCAVLLALARSPRTVGLLMDEVVIATLVDTFSAYDADGVWASGLAPPWKLAAQALRRMADAFLKRA--VAEPGCGGTDPADGSTPTALAYTEANDARVREMLASLPPFSSRSWQLSAALEQPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPVGRCEGVLGVAAHDKYNRCNRQEHVTAICSNTPVPRLSTCAQSTATAAALALPWGAARAYWAWRRGARRHAHLALPRPPLL----RAGLTAMAGAVAAMALYE--GGLRTNNWLLWRRSAPSVNRQ----VAFETALTAAQGVCLFALLRAAPYCLLPAAAGLYMFEE 601
            D      V LLK V++      + H     ++AV L R     P    C K L  AGC +LL LA S  TVGLL  E V+  L D          +A G     K+A  ALR++  AFLKRA  V++PG    + A G  PTALA TE N A V+E+L  LP +++ SW+L   L                                                                HV                     AAALA+PWGAAR+Y  WR+  ++    A+PR  LL    RAG T+  G V  M L+E         +L      PS+ RQ    + +E  +    G  +F +L A PY L+P  AG ++  E
Sbjct:   67 DAASAQLVALLKGVMAADFRLELVHCQMFGATAVPLRRC---KPLPSCCAKTLHTAGCDLLLELASSSETVGLLTSEEVVHALSDV--------AFADGDIISQKMAQSALRQVGAAFLKRAAMVSQPGDTTLNGAPG--PTALALTERNRALVQELLDRLP-YTTGSWKLDVDLV---------------------------------------------------------------HVIK-------------------AAALAVPWGAARSYAVWRKAHKQGLQPAMPRRALLQGLLRAGRTSALG-VMLMTLFEHVADETAGRFLHGGSEQPSLKRQALVGLVYEPII---MGEYVFGVLCAMPYSLVPWVAGGFLAAE 350          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|338234 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A836C7G9_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZG11_9STRA2.330e-1328.61Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZJ04_9STRA2.450e-1229.95Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 396..444
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 402..423

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_90contigContig_90:293038..299808 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|338234mRNA_11433Tribonema minus UTEX_B_3156 mRNAContig_90 293038..299847 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|338234|MIX46997_18_21 ID=Trimin1|338234|MIX46997_18_21|Name=jgi.p|Trimin1|338234|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=617bp
MRRARYAVATGSHGPPPSLIEVASVMNDVFEPLDASAACLQHGALQLVRD
GLAQSDRSTRALSCELARLLTRHPTPAVTADAELMAAVLRGAAAQMDEWL
EGLGGEGEGAAVARARAELAQTYGAAAALQALAQLLNAGGVEAAATLDRD
GVAQLTRLVAEAVPAARWRQADMFGVEHGHGSLDQLDALYRPVAVTATGR
CRRPPPQAAATYIPWWCKRAAPLPLLLTCELTASDRRPVSQVLLLKHVLS
CRSHTSVAHTSSAVALLRAAAFHPSVRRCQKLDLAGCAVLLALARSPRTV
GLLMDEVVIATLVDTFSAYDADGVWASGLAPPWKLAAQALRRMADAFLKR
AVAEPGCGGTDPADGSTPTALAYTEANDARVREMLASLPPFSSRSWQLSA
ALEQPPPPPRPPAPPPPRSRTYPPVPRLRTRAEHRHRRRPRPPVGRCEGV
LGVAAHDKYNRCNRQEHVTAICSNTPVPRLSTCAQSTATAAALALPWGAA
RAYWAWRRGARRHAHLALPRPPLLRAGLTAMAGAVAAMALYEGGLRTNNW
LLWRRSAPSVNRQVAFETALTAAQGVCLFALLRAAPYCLLPAAAGLYMFE
EVGWSYTDPALIQSLG*
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