Trimin1|338079|MIX46842_8_13 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|338079
Unique NameTrimin1|338079|MIX46842_8_13
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length852
Homology
BLAST of jgi.p|Trimin1|338079 vs. uniprot
Match: A0A835YI13_9STRA (UmuC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YI13_9STRA)

HSP 1 Score: 1469 bits (3804), Expect = 0.000e+0
Identity = 851/851 (100.00%), Postives = 851/851 (100.00%), Query Frame = 0
Query:    1 MEIKPELKGKPCAVVQYDTTGSLETVGMDNPARYVTTSRSGIIAVSYEARERGVKRNMTGQEARKICPDIQLVTVPTAHGKADLTLYRNAGARVVDVLGTGGLVERASVDEAYVDVTAEASRLLALACKDPKAWGHVVEDAGISKVAGLGDKAATALSRDLVRTGHCGVKAEALGPAEAATVWWGRPLHEWTKDERLLACGAAVVTRLRDMVTKKLGYTCSGGIAHNKSMAKLASGLHKPKQQTVVPASQVAGLMEGLPLERIRGLGGKLGEQVRSDLKVTTAGELAAMPEATLRRLYGEKQAALLADMARGVDLTPVVQRALSKSVSCGKTFYGNSCIRTEETLKRWLLELAAEIQERLDAQRADHKRAATRLTVHLTPEGSGGGGSGTYRNTSGNAISRSCDLREGAESMAADAFAQWRRRXXXXRRHRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXGATIRRRCGAIRIIYLCGGGSSSGGTNSDTNDHAASRSCDLRERAQIMAADMFAQVSKWLSGQRSWGITSMFIAADGFEDIPNVPPSFEVEFYNMFPSXXXXXXXXXXXXXXXXITSFFKARQKAAPSPCPPTPPPISGAPDDTVKGDAGREHGADEETSMSPRRRKRQRAHGADNGDAPHRDSAQRDXXXXXXXXXXXXXXXXXXXXXXXXCGDDVQQGISDGGGVLSXXXXXXXXXXXXAAQAGSDQRVCRLPAPLPPIKHEAESQALQPSPPTHSADIKPSPSSFEDMRRDFEQVSAAAVKPVDLCACMNFWHRLVDLPEDVRHDFEQRLEQLTRLSPPAGGIEQFLVKHTGAAPAPPLWYTAGQRAKPKGAAKKASKGSITQYLNGK 851
            MEIKPELKGKPCAVVQYDTTGSLETVGMDNPARYVTTSRSGIIAVSYEARERGVKRNMTGQEARKICPDIQLVTVPTAHGKADLTLYRNAGARVVDVLGTGGLVERASVDEAYVDVTAEASRLLALACKDPKAWGHVVEDAGISKVAGLGDKAATALSRDLVRTGHCGVKAEALGPAEAATVWWGRPLHEWTKDERLLACGAAVVTRLRDMVTKKLGYTCSGGIAHNKSMAKLASGLHKPKQQTVVPASQVAGLMEGLPLERIRGLGGKLGEQVRSDLKVTTAGELAAMPEATLRRLYGEKQAALLADMARGVDLTPVVQRALSKSVSCGKTFYGNSCIRTEETLKRWLLELAAEIQERLDAQRADHKRAATRLTVHLTPEGSGGGGSGTYRNTSGNAISRSCDLREGAESMAADAFAQWRRRXXXXRRHRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXGATIRRRCGAIRIIYLCGGGSSSGGTNSDTNDHAASRSCDLRERAQIMAADMFAQVSKWLSGQRSWGITSMFIAADGFEDIPNVPPSFEVEFYNMFPSXXXXXXXXXXXXXXXXITSFFKARQKAAPSPCPPTPPPISGAPDDTVKGDAGREHGADEETSMSPRRRKRQRAHGADNGDAPHRDSAQRDXXXXXXXXXXXXXXXXXXXXXXXXCGDDVQQGISDGGGVLSXXXXXXXXXXXXAAQAGSDQRVCRLPAPLPPIKHEAESQALQPSPPTHSADIKPSPSSFEDMRRDFEQVSAAAVKPVDLCACMNFWHRLVDLPEDVRHDFEQRLEQLTRLSPPAGGIEQFLVKHTGAAPAPPLWYTAGQRAKPKGAAKKASKGSITQYLNGK
Sbjct:    1 MEIKPELKGKPCAVVQYDTTGSLETVGMDNPARYVTTSRSGIIAVSYEARERGVKRNMTGQEARKICPDIQLVTVPTAHGKADLTLYRNAGARVVDVLGTGGLVERASVDEAYVDVTAEASRLLALACKDPKAWGHVVEDAGISKVAGLGDKAATALSRDLVRTGHCGVKAEALGPAEAATVWWGRPLHEWTKDERLLACGAAVVTRLRDMVTKKLGYTCSGGIAHNKSMAKLASGLHKPKQQTVVPASQVAGLMEGLPLERIRGLGGKLGEQVRSDLKVTTAGELAAMPEATLRRLYGEKQAALLADMARGVDLTPVVQRALSKSVSCGKTFYGNSCIRTEETLKRWLLELAAEIQERLDAQRADHKRAATRLTVHLTPEGSGGGGSGTYRNTSGNAISRSCDLREGAESMAADAFAQWRRRXXXXRRHRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXGATIRRRCGAIRIIYLCGGGSSSGGTNSDTNDHAASRSCDLRERAQIMAADMFAQVSKWLSGQRSWGITSMFIAADGFEDIPNVPPSFEVEFYNMFPSXXXXXXXXXXXXXXXXITSFFKARQKAAPSPCPPTPPPISGAPDDTVKGDAGREHGADEETSMSPRRRKRQRAHGADNGDAPHRDSAQRDXXXXXXXXXXXXXXXXXXXXXXXXCGDDVQQGISDGGGVLSXXXXXXXXXXXXAAQAGSDQRVCRLPAPLPPIKHEAESQALQPSPPTHSADIKPSPSSFEDMRRDFEQVSAAAVKPVDLCACMNFWHRLVDLPEDVRHDFEQRLEQLTRLSPPAGGIEQFLVKHTGAAPAPPLWYTAGQRAKPKGAAKKASKGSITQYLNGK 851          
BLAST of jgi.p|Trimin1|338079 vs. uniprot
Match: A0A2P6TXE9_CHLSO (DNA polymerase eta isoform C n=3 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TXE9_CHLSO)

HSP 1 Score: 339 bits (869), Expect = 2.580e-95
Identity = 194/374 (51.87%), Postives = 237/374 (63.37%), Query Frame = 0
Query:    5 PELKGKPCAVVQYDTTGSLETVGMDNPARYVTTSRSGIIAVSYEARERGVKRNMTGQEARKICPDIQLVTVPTAHGKADLTLYRNAGARVVDVLGTGGLVERASVDEAYVDVTAEASRLLALACKDPKAWGHVVEDAGISKVAGLGDKAATALSRDLVRTGHCGVKAEALGPAEAATVWWGRPLHEWTKDERLLACGAAVVTRLRDMVTKKLGYTCSGGIAHNKSMAKLASGLHKPKQQTVVPASQVAGLMEGLPLERIRGLGGKLGEQVRSDLKVTTAGELAAMPEATLRRLYGEKQAALLADMARGVDLTPVVQRALSKSVSCGKTFYGNSCIRTEETLKRWLLELAAEIQERLDAQRADHKRAATRLTVHL 378
            P L+GKP  VVQY+  GSLET G D   R +  S   +IAVSYEAR  GVKRNM G +ARK CPDIQLV VPTAHGKADLTLYR+ G +V+ +L   G+ ERAS+DE Y+D+TAEA R L       +A G V                   +  D V            G A+AA+ WW RP HEW   ERLLAC AA V  LR  V ++LGYTCS GIAH K MAKL SGLHKP QQTV+PAS V  L+  LP+ ++RGLGGK GEQV S+L +TT GELAA+P   L   +G+K A  L  +ARGV    V +R L KS++CGKTF G + +R+ E + +WLLELA E+ ERL+ +R D+ R    LTV+L
Sbjct: 1922 PSLRGKPVGVVQYNPYGSLETRGPDEN-RLMNDSNGSLIAVSYEARAHGVKRNMRGDDARKACPDIQLVQVPTAHGKADLTLYRSEGKKVLQILSRLGIAERASIDECYLDLTAEAQRRL-------EACGGVPP---------------LPMHPDQVHVS---------GAADAAS-WWQRPPHEWQPGERLLACAAAAVAELRQAVREELGYTCSAGIAHTKLMAKLCSGLHKPAQQTVLPASGVPDLLAPLPVSKLRGLGGKFGEQVCSELGITTVGELAAVPLPRLESAFGDKDAQWLYAVARGVTDDAVQERTLPKSLNCGKTFRGRTSLRSMEAVHKWLLELAGELSERLEQEREDNNRVPQLLTVNL 2262          
BLAST of jgi.p|Trimin1|338079 vs. uniprot
Match: A0A8J9S903_9CHLO (DNA polymerase eta n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9S903_9CHLO)

HSP 1 Score: 321 bits (823), Expect = 8.140e-95
Identity = 190/414 (45.89%), Postives = 252/414 (60.87%), Query Frame = 0
Query:    5 PELKGKPCAVVQYDTTGSLETVGMDNPARYVTTSRSGIIAVSYEARERGVKRNMTGQEARKICPDIQLVTVPTAHGKADLTLYRNAGARVVDVLGTGGLVERASVDEAYVDVTAEASRLLALACKDPKAWGHVVEDAGISKVAGLGDKAATALSRDLVRTGHCGVKAEALGPAEAATVWWGRPLHEWTKDERLLACGAAVVTRLRDMVTKKLGYTCSGGIAHNKSMAKLASGLHKPKQQTVVPASQVAGLMEGLPLERIRGLGGKLGEQVRSDLKVTTAGELAAMPEATLRRLYGEKQAALLADMARGVDLTPVVQRALSKSVSCGKTFYGNSCIRTEETLKRWLLELAAEIQERLDAQRADHKRAATRLTVHLTPEGSGGGGSGTYRNTSGNAISRSCDLREGAES-MAADAF 417
            P L GKP AVVQY+  G+L T+  +   R    S   +IAV YEAR +GVKR M G +ARK CPD+ LV VP AHGKADLTLYR  G +V+ +L    + ERAS+DE Y+D++ EA + +A AC      GH                    L  +L +   CG + E  G AEA   WW RP+  W   +RLLACGAAVV  LR  V+++LG++CS GIAHNK +AKLASG+HKP QQTVV    V GLM  LP+ ++R LGGK GE+V + L ++T GELAA+P   L  + G+  A  L  ++RG+D   V +R L KS+SCGKTF G++ ++    + +WL ELA+E++ER+ A R +++R    LTV +  EG  G        TSG ++SRSC LR    + MAADA 
Sbjct:   30 PSLIGKPTAVVQYNPNGNLSTLRPEEE-RIFNRSNGSLIAVGYEARAKGVKRGMRGDDARKACPDLNLVQVPVAHGKADLTLYRACGKQVLGILARLSIAERASIDECYLDISEEAKKRMA-ACS-----GH------------------PPLPVNLEQVHVCGEEGE--GAAEA---WWNRPVGAWGPGQRLLACGAAVVAELRAAVSRELGFSCSAGIAHNKILAKLASGMHKPSQQTVVTLDCVPGLMAALPISKLRQLGGKFGEEVMAALGISTVGELAAVPLRRLEAVCGQDDAMWLHRLSRGIDDEEVKERQLPKSISCGKTFRGHTALKDFPAVHKWLGELASELEERISADREENERTPGLLTVGMWGEGGPG--------TSGGSVSRSCQLRRPESAPMAADAL 405          
BLAST of jgi.p|Trimin1|338079 vs. uniprot
Match: I0YLK6_COCSC (DNA/RNA polymerase (Fragment) n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YLK6_COCSC)

HSP 1 Score: 305 bits (781), Expect = 2.070e-91
Identity = 178/406 (43.84%), Postives = 239/406 (58.87%), Query Frame = 0
Query:   13 AVVQYDTTGSLETVGMDNPARYVTTSRSGIIAVSYEARERGVKRNMTGQEARKICPDIQLVTVPTAHGKADLTLYRNAGARVVDVLGTGGLVERASVDEAYVDVTAEASRLLALACKDPKAWGHVVEDAGISKVAGLGDKAATALSRDLVRTGHCGVKAEALGPAEAATVWWGRPLHEWTKDERLLACGAAVVTRLRDMVTKKLGYTCSGGIAHNKSMAKLASGLHKPKQQTVVPASQVAGLMEGLPLERIRGLGGKLGEQVRSDLKVTTAGELAAMPEATLRRLYGEKQAALLADMARGVDLTPVVQRALSKSVSCGKTFYGNSCIRTEETLKRWLLELAAEIQERLDAQRADHKRAATRLTVHLTPEGSGGGGSGTYRNTSGNAISRSCDLREG-AESMAADAF 417
            A +QY+  G L T+  D   R   +S   +IAV YEAR +GVKR M G +ARK+CPD+ LV VP AHGKADLTLYR +G +V+++L    + ERAS+DE Y+D+T EA R LA +   P    +V E  G                                G  EA   WW RP+  W   +RLLACGAAVV  LR  V ++LGY+CS GIAHNK +AKLASG+HKP QQT+V    V GLM GLP+ ++R LGGK GE++ + L +TT GEL+A+P   L  +  +  A  L  ++RG+D   V +R L +S+SCGKTF G++ ++    + +WL EL  E++ER+ A RAD++R    LTV +  EG  G        TSG ++SRSC LR   ++ MA D  
Sbjct:    2 AELQYNPNGDLSTLRPDEE-RIFNSSNGSLIAVGYEARAKGVKRGMRGDDARKVCPDLNLVQVPVAHGKADLTLYRASGKQVLNILARLSVAERASIDECYLDITEEAKRRLAASSAHPPLPINVGEVHG-------------------------------EGGTEA---WWHRPVGAWGPGQRLLACGAAVVAELRAAVRRELGYSCSAGIAHNKILAKLASGMHKPSQQTLVTLDCVPGLMAGLPIPKLRQLGGKFGEEIMTALNITTVGELSAVPLRRLEAVCSQADALWLHRLSRGIDDEEVKERQLPQSISCGKTFRGHTALKAFPAVHKWLGELGDELEERITADRADNERVPRLLTVGMWGEGGPG--------TSGGSVSRSCQLRRPESQPMAEDGL 364          
BLAST of jgi.p|Trimin1|338079 vs. uniprot
Match: A0A7S1NH26_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NH26_9EUGL)

HSP 1 Score: 290 bits (743), Expect = 1.100e-85
Identity = 182/419 (43.44%), Postives = 240/419 (57.28%), Query Frame = 0
Query:    5 PELKGKPCAVVQYDTTGSLETVGMDNPARYVTTSRSGIIAVSYEARERGVKRNMTGQEARKICPDIQLVTVPTAHGKADLTLYRNAGARVVDVLGTGGLVERASVDEAYVDVTAEASRLLALACKDPKAWGHVVEDAGISKVAGLGDKAATALSRDLVRTGHCGVKAEALGPAEAATVWWGRPLHEWTKDERLLACGAAVVTRLRDMVTKKLGYTCSGGIAHNKSMAKLASGLHKPKQQTVVPASQVAGLMEGLPLERIRGLGGKLGEQVRSDLKVTTAGELAAMPEATLRRLYGEKQAALLADMARGVDLTPVVQRALSKSVSCGKTFYGNSCIRTEETLKRWLLELAAEIQERLDAQRADHKRAATRLTVHLTPEGSGGGGSGTYRNTSGNAISRSCDLRE-GAESMAADAFAQWRR 422
            P L+G+P AVVQY+  G L T+    P R    S   +IAVSYEAR  GVKRNM G EAR+ CP++QLV VPTA+GKADLT+YR AGA+V+D+L  GG+ ERAS+DEAY+DVT EA R                 D G   V  L  +       D    G  G +A           W+  P   W+  + LLA GAAVV  LR +V  +LGY+CS GIAHNK +AKL SGLHKP+QQT++P S V  L++ L + ++R LGGKLG+QV   L + T G+L A+PE  LR L+G +    L  MARG     V QR L KS+ CGKTF   + IRT + ++ WL ++A E+ ER+ + R  ++R    + V L+  G              + +SRSC +     ES+A+   A  RR
Sbjct:   39 PSLQGQPIAVVQYNPFGDLRTILPSEP-RIFNDSNGSLIAVSYEARAFGVKRNMRGDEARRQCPELQLVQVPTANGKADLTIYREAGAQVIDILARGGVCERASIDEAYLDVTEEALR-------------RARRDHG-RPVLPLNPEQCRVYGPD----GVAGCEA-----------WFSTPDWAWSDADELLAHGAAVVAELRHVVQTELGYSCSAGIAHNKLLAKLCSGLHKPQQQTILPESAVQRLLDPLMIAKLRSLGGKLGQQVAQVLGIETVGQLRAVPETRLRTLFGPETGPWLHRMARGQSSDRVQQRTLPKSLGCGKTFRAQNAIRTLQDVQYWLQQIARELAERIGSDRERNQRVPQTMGVGLSSHG--------------DHVSRSCAMPGLSVESIASAGLALVRR 413          
BLAST of jgi.p|Trimin1|338079 vs. uniprot
Match: A0A7J7PJW7_9CHLO (UmuC domain-containing protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PJW7_9CHLO)

HSP 1 Score: 298 bits (763), Expect = 4.560e-85
Identity = 186/416 (44.71%), Postives = 234/416 (56.25%), Query Frame = 0
Query:    1 MEIK--PELKGKPCAVVQYDTTGSLETVG-MDNPARYVTTSRSGIIAVSYEARERGVKRNMTGQEARKICPDIQLVTVPTAHGKADLTLYRNAGARVVDVLGTGGLVERASVDEAYVDVTAEASRLLALACKDPKAWGHVVEDAGISKVAGLGDKAATALSRDLVRTGHCGVKAEALGPAEAATVWWGRPLHEWTKDERLLACGAAVVTRLRDMVTKKLGYTCSGGIAHNKSMAKLASGLHKPKQQTVVPASQVAGLMEGLPLERIRGLGGKLGEQVRSDLKVTTAGELAAMPEATLRRLYGEKQAALLADMA-----------------------------------RGVDLTPVVQRALSKSVSCGKTFYGNSCIRTEETLKRWLLELAAEIQERLDAQRADHKRAATRLTVHL 378
            +E+K  P LKG P  VVQY+  G L TV   DN  R    S   IIAVSYEAR  GVKRNM  Q A+K+CP++ +V VP AHGKAD+ +YR+AGA V+ VL +G + ERASVDEAY+DVTA A +LLA A                      GD AA ++    V        A+A       + WW RP   WT+DE LLA GA VV +LR  V ++LG++CS GIAH K +AKL SGL+KP QQT+VPA+ V GL+  LPL ++R LGGK GE+V   L V+T GELAA+P   L  L G + AA L  +A                                   RG D   V  R L KS+SCGKTF G S +     +  WL +LA E+QERL+A R DH+R  ++LTV +
Sbjct:   16 VEVKRNPSLKGTPVVVVQYNPYGDLRTVKPSDN--RLFPDSNGSIIAVSYEARAHGVKRNMMAQAAKKLCPELNIVQVPVAHGKADIQIYRDAGAAVIGVLSSGAVCERASVDEAYLDVTAGAQQLLAAAAXXXX----------------XGDSAAESIEGWHV--------ADAEPRTAGVSAWWSRPRDSWTQDEALLAAGAVVVAQLRAAVAQQLGFSCSAGIAHTKILAKLGSGLNKPAQQTLVPAAAVPGLLGPLPLPKLRQLGGKFGEEVMQGLGVSTVGELAAVPLPRLEALVGLENAAWLQRLAQLSRCSTLPNAAGCGETLPAASTPDTPGATVHTALRGKDDEEVKPRTLPKSISCGKTFRGGSALTGLTAVHSWLQQLATELQERLEADRRDHQRTPSQLTVSV 405          
BLAST of jgi.p|Trimin1|338079 vs. uniprot
Match: A0A2V0P7X8_9CHLO (DNA polymerase eta n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P7X8_9CHLO)

HSP 1 Score: 297 bits (761), Expect = 2.700e-84
Identity = 184/399 (46.12%), Postives = 232/399 (58.15%), Query Frame = 0
Query:    2 EIKPELKGKPCAVVQYDTTGSLETVGMDNPARYVT----TSRSGIIAVSYEARERGVKRNMTGQEARKICPDIQLVTVPTAHGKADLTLYRNAGARVVDVLGTGGLVERASVDEAYVDVTAEASRLLALACKDPKAWGHVVEDAGISKVAGLGDKAATALSRDLVRTGH--------CGVKAEALGPAEAATVWWGRPLHEWTKDERLLACGAAVVTRLRDMVTKKLGYTCSGGIAHNKSMAKLASGLHKPKQQTVVPASQVAGLMEGLPLERIRGLGGKLGEQVRSDLKVT------------TAGELAAMPEATLRRLYGEKQAALLADMARGVDLTPVVQRALSKSVSCGKTFYGNSCIRTEETLKRWLLELAAEIQERLDAQRADHKRAATRLTV 376
            ++ P+LKG+P   VQY+  G L  +     A  +     +  S IIAVSY AR  GVKRNM+  EARK+CP++ +V VP AHGKADLT+YR+AGA V+ VL +  + ERAS+DEAY+DVTA A+ LL    +   A    +  A  ++   LG  A           G         CG              WWGRP  EW  DERLLA GA VV  LR+ V ++LG+TCS GIA +K +AKLASGLHKP+QQT+VP   V  L+  LPL R+R LGGK GEQ+   L               T G+LAA+P A L    GE+ A  L  +ARG+D   V  RAL KSVSCGKTF G S +R    ++RWL ELA E++ER+ A R DH+RA T LTV
Sbjct:   19 KLNPDLKGRPVVTVQYNPFGDLTALPPQPAAARILPPGGSGGSSIIAVSYAARAHGVKRNMSAAEARKLCPELVVVQVPVAHGKADLTIYRDAGAAVLAVLASQSVAERASIDEAYLDVTAAATALL----RAEAAAAAALPPALPAEPGSLGAPADRPXXXXXXPPGSFEGWHVAGCG-DXXXXXXXXXXXXWWGRPAGEWGLDERLLAAGARVVATLREAVERRLGFTCSAGIAPSKVLAKLASGLHKPRQQTLVPPGGVERLLSPLPLGRLRSLGGKFGEQLAERLAAAAPPDGEGGRAPATVGDLAAVPLARLVAWVGEEAAHGLYRLARGIDGAEVKARALPKSVSCGKTFRGPSALRAFGDVRRWLGELAGELEERIQADRRDHQRAPTLLTV 412          
BLAST of jgi.p|Trimin1|338079 vs. uniprot
Match: A0A5J4XRP8_9CHLO (DNA polymerase eta n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XRP8_9CHLO)

HSP 1 Score: 283 bits (725), Expect = 4.700e-83
Identity = 176/460 (38.26%), Postives = 238/460 (51.74%), Query Frame = 0
Query:    5 PELKGKPCAVVQYDTTGSLETVGMDNPARYVTTSRSGIIAVSYEARERGVKRNMTGQEARKICPDIQLVTVPTAHGKADLTLYRNAGARVVDVLGTGGLVERASVDEAYVDVTAEASRLLALACKDPKAWGHVVEDAGISKVAGLGDKAATALSRDLVRTGHCGVKAEALGPAEAATVWWGRPLHEWTKDERLLACGAAVVTRLRDMVTKKLGYTCSGGIAHNKS----------------------------------------MAKLASGLHKPKQQTVVPASQVAGLMEGLPLERIRGLGGKLGEQVRSDLKVTTAGELAAMPEATLRRLYGEKQAALLADMARGVDLTPVVQRALSKSVSCGKTFYGNSCIRTEETLKRWLLELAAEIQERLDAQRADHKRAATRLTVHLTPEGSGGGGSGTYRNT---------SGNAISRSCDLREGAESMAAD 415
            P+LKGKP   VQY+  G L T+  D P R    S   +IAVSYEAR  GVKR M G +ARK+CP++QLV VPTAHGKADLT+YR+AG +VV++L    + ERAS+DE Y+D+T EA + LA +   P                         L  +  R   CG + +     EA   WW R   +W   E LLACGA  V  LR  V  +L Y+CS GIAHNK+                                        +AKLASG+HKP QQT+VP + V+GL++ LP+ ++R LGGK G+++ + L + T GELA +   +L  L+G+  A  L  +ARG D+  V QR L KS+SCGKTF  ++ + T + ++ WL EL  E++ER+   R  + R    LTV +    S G                    N +SRSC +R+   S   D
Sbjct:   28 PDLKGKPVVTVQYNPFGDLRTITPDEP-RIFNDSNGSLIAVSYEARASGVKRGMRGDQARKVCPEVQLVQVPTAHGKADLTVYRDAGKQVVEILSRMAICERASIDECYLDLTEEAHKRLAASGGXPP------------------------LPINPDRVHICGQEGD-----EAVGDWWKRHPKQWQAGELLLACGATAVADLRAAVAAELDYSCSAGIAHNKASYHFATCMHASIADGRCDHLCLPSSSPLLLSPPPLPSSEILAKLASGMHKPSQQTLVPLAAVSGLLKDLPIPKLRQLGGKFGDELMASLSIKTVGELAEVTLQSLESLHGDSTAQWLYRLARGCDMEEVKQRTLPKSISCGKTFRNHTALHTIDEVRHWLKELGQELEERVLEDRKANARLPQLLTVSIYTSSSAGXXXXXXXXXXXXXXAPWQGSNNVSRSCQIRKATASCMGD 457          
BLAST of jgi.p|Trimin1|338079 vs. uniprot
Match: A0A2P6V1H9_9CHLO (DNA polymerase eta isoform A n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V1H9_9CHLO)

HSP 1 Score: 295 bits (754), Expect = 2.480e-82
Identity = 181/392 (46.17%), Postives = 225/392 (57.40%), Query Frame = 0
Query:   35 VTTSRSGIIAVSYEARERGVKRNMTGQEARKICPDIQLVTVPTAHGKADLTLYRNAGARVVDVLGTGGLVERASVDEAYVDVTAEASRLLALACKDPKAWGHVVEDAGISKVAGLGDKAATALSRDLVRTGHCGVKAEALGPAEAATVWWGRPLHEWTKDERLLACGAAVVTRLRDMVTKKLGYTCSGGIAHNKSMAKLASGLHKPKQQTVVPASQVAGLMEGLPLERIRGLGGKLGEQVRSDLKVTTAGELAAMPEATLRRLYGEKQAALLADMARGVDLTPVVQRALSKSVSCGKTFYGNSCIRTEETLKRWLLELAAEIQERLDAQRADHKRAATRLTVHLT---PEGSGGGGSGTYRNTSGNAISRSCDLREG-AESMAADAFAQWRR 422
            +  S   +IAVSYEAR  GV RNM G EAR  CP+I LV VPTAHGKADLTLYR  G RV+D+L      ERAS+DE Y+D+T EA R LA     P    H  +                             V     G +  A  WW RP   W   ERLLA  AAVV  LR+ V ++LGY+CS G+AH K +AKL SGLHKP QQTV+PA+ V  L+  LP+ ++RGLGGK GE V S+L + T G+LAA P A L   +GEK+A  LA +A GV    V +R L+KSVSCGKTF G   +R  + ++ WLLEL  E+ ERL+A R  + R    LTV+     P G   GG G       ++ SRSC LR+  A+++A DA A  RR
Sbjct:    1 MNASNGSLIAVSYEARAAGVTRNMRGNEARAACPEINLVQVPTAHGKADLTLYRAEGKRVLDILARLARTERASIDECYLDLTEEAQRRLAEGGGVPPPPLHPEQ-----------------------------VHVMLEGTSAGAAAWWHRPDEAWGPGERLLAAAAAVVADLREAVQRELGYSCSAGVAHTKLLAKLCSGLHKPAQQTVLPAAAVPALLVPLPIPKLRGLGGKFGETVMSELGIETVGQLAATPFARLEAAFGEKEARWLAGLAVGVTDDAVEERKLAKSVSCGKTFRGRHALRDLDAVRSWLLELGGELSERLEADREANNRVPQLLTVNFASTLPWGPAPGG-GVQAVAGHHSTSRSCPLRKPTADAIADDATALVRR 362          
BLAST of jgi.p|Trimin1|338079 vs. uniprot
Match: A0A516AG47_LINPO (DNA polymerase eta (Fragment) n=1 Tax=Lingulodinium polyedra TaxID=160621 RepID=A0A516AG47_LINPO)

HSP 1 Score: 281 bits (720), Expect = 2.940e-82
Identity = 192/427 (44.96%), Postives = 242/427 (56.67%), Query Frame = 0
Query:    5 PELKGKPCAVVQYDTTGSLETVGM-DNP---ARYVTTSRSGIIAVSYEARERGVKRNMTGQEARKICPDIQLVTVPTAHGKADLTLYRNAGARVVDVLGT-GGLVERASVDEAYVDVTAEASRLLALACKDPKAWGHVVEDAGISKVAGLGDKA----ATALSRDLVRTGHCGVKAEALGPAEAATVWWGRPLHEWTKDERLLACGAAVVTRLRDMVTKKLGYTCSGGIAHNKSMAKLASGLHKPKQQTVVPASQVAGLMEGLPLERIRGLGGKLGEQVRSDLKVTTAGELAAMPEATLRRLYGEKQAALLADMARGVDLTPVVQRALSKSVSCGKTFYGNSCIRTEETLKRWLLELAAEIQERLDAQRADHKRAATRLTVHLTPEGSGGGGSGTYRNTSGNAISRSCDLREGAESMAADAFAQWRR 422
            P L+G PCAVVQY+   S +  G  D P    R+V  S  GIIAVSYEAR RGV R M+ QEAR+ CP+I LV VPTA GKADL +Y+ AG  V  +L       E+ SVDE  VD+TAEA RLLA      + W   +  A   + + L D A    A A+SRD  R GH G      G A AA    G     W+  +R L  GA VV  LR  + ++LG+TCSGG+A +K +AKL  GLHKP QQTVV    VA L+  LPL+R+ GLGG+LG QV+  L+V+TA ELAA P A L   +  +QAA L ++A G    PV  R L KS+S GKTF G   + T    +RW  ELA E+  R  A  A H RA TR++V +     G GG G+ +      +        GA+ +AA A A +RR
Sbjct:   35 PRLEGLPCAVVQYN---SRQRGGAPDRPPEACRWVQGSSGGIIAVSYEARRRGVTRQMSSQEARRQCPEIVLVQVPTAFGKADLRIYKEAGDSVASLLARRAAACEKRSVDEVAVDLTAEAERLLA-----ERDWASELLPAA-RRASHLADSARSRSAAAVSRDETRRGHAG-----QGEAAAAAGEDGGWQRAWSGADRRLIAGAVVVAELRAAIERELGFTCSGGVAESKLLAKLGCGLHKPNQQTVVLPEAVAALLRDLPLDRLPGLGGELGSQVKEKLQVSTASELAAAPRAALEAAF-PRQAAHLLELAEGRHFDPVQDRELCKSLSNGKTFLGQLRLNTARDCERWFGELAGELHRRYRADVARHGRAPTRISVAVAAGALGAGGGGSRQ------MPLDLGPSAGAQQIAAGACACFRR 440          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|338079 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YI13_9STRA0.000e+0100.00UmuC domain-containing protein n=1 Tax=Tribonema m... [more]
A0A2P6TXE9_CHLSO2.580e-9551.87DNA polymerase eta isoform C n=3 Tax=Chlorella sor... [more]
A0A8J9S903_9CHLO8.140e-9545.89DNA polymerase eta n=1 Tax=Coccomyxa sp. Obi TaxID... [more]
I0YLK6_COCSC2.070e-9143.84DNA/RNA polymerase (Fragment) n=1 Tax=Coccomyxa su... [more]
A0A7S1NH26_9EUGL1.100e-8543.44Hypothetical protein (Fragment) n=1 Tax=Eutreptiel... [more]
A0A7J7PJW7_9CHLO4.560e-8544.71UmuC domain-containing protein n=1 Tax=Scenedesmus... [more]
A0A2V0P7X8_9CHLO2.700e-8446.12DNA polymerase eta n=1 Tax=Raphidocelis subcapitat... [more]
A0A5J4XRP8_9CHLO4.700e-8338.26DNA polymerase eta n=1 Tax=Trebouxia sp. A1-2 TaxI... [more]
A0A2P6V1H9_9CHLO2.480e-8246.17DNA polymerase eta isoform A n=1 Tax=Micractinium ... [more]
A0A516AG47_LINPO2.940e-8244.96DNA polymerase eta (Fragment) n=1 Tax=Lingulodiniu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 353..373
NoneNo IPR availableGENE3D1.10.150.20coord: 260..317
e-value: 3.5E-16
score: 60.9
NoneNo IPR availableGENE3D3.40.1170.60coord: 1..78
e-value: 2.4E-18
score: 67.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 631..655
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 583..688
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 729..743
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 711..746
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 605..624
NoneNo IPR availablePANTHERPTHR45873DNA POLYMERASE ETAcoord: 488..740
NoneNo IPR availablePANTHERPTHR45873:SF1DNA POLYMERASE ETAcoord: 488..740
coord: 4..428
NoneNo IPR availablePANTHERPTHR45873DNA POLYMERASE ETAcoord: 4..428
IPR017961DNA polymerase, Y-family, little finger domainPFAMPF11799IMS_Ccoord: 324..407
e-value: 1.3E-8
score: 35.3
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 79..246
e-value: 1.3E-29
score: 105.1
IPR001126UmuC domainPFAMPF00817IMScoord: 4..235
e-value: 3.5E-37
score: 127.7
IPR001126UmuC domainPROSITEPS50173UMUCcoord: 1..267
score: 24.538696
IPR036775DNA polymerase, Y-family, little finger domain superfamilyGENE3D3.30.1490.100coord: 318..441
e-value: 1.3E-23
score: 85.6
IPR036775DNA polymerase, Y-family, little finger domain superfamilySUPERFAMILY100879Lesion bypass DNA polymerase (Y-family), little finger domaincoord: 323..425
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 4..318

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_9contigContig_9:1703822..1721405 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|338079mRNA_3663Tribonema minus UTEX_B_3156 mRNAContig_9 1703472..1721405 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|338079|MIX46842_8_13 ID=Trimin1|338079|MIX46842_8_13|Name=jgi.p|Trimin1|338079|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=852bp
MEIKPELKGKPCAVVQYDTTGSLETVGMDNPARYVTTSRSGIIAVSYEAR
ERGVKRNMTGQEARKICPDIQLVTVPTAHGKADLTLYRNAGARVVDVLGT
GGLVERASVDEAYVDVTAEASRLLALACKDPKAWGHVVEDAGISKVAGLG
DKAATALSRDLVRTGHCGVKAEALGPAEAATVWWGRPLHEWTKDERLLAC
GAAVVTRLRDMVTKKLGYTCSGGIAHNKSMAKLASGLHKPKQQTVVPASQ
VAGLMEGLPLERIRGLGGKLGEQVRSDLKVTTAGELAAMPEATLRRLYGE
KQAALLADMARGVDLTPVVQRALSKSVSCGKTFYGNSCIRTEETLKRWLL
ELAAEIQERLDAQRADHKRAATRLTVHLTPEGSGGGGSGTYRNTSGNAIS
RSCDLREGAESMAADAFAQWRRRRRRRRRHRDTSSNAVSHCCDVRGGTES
MAADTFAHVRGATIRRRCGAIRIIYLCGGGSSSGGTNSDTNDHAASRSCD
LRERAQIMAADMFAQVSKWLSGQRSWGITSMFIAADGFEDIPNVPPSFEV
EFYNMFPSMFIAADGFEDIPNVPPITSFFKARQKAAPSPCPPTPPPISGA
PDDTVKGDAGREHGADEETSMSPRRRKRQRAHGADNGDAPHRDSAQRDDS
SARHGGSAPHESGTAQHGDSARCGDDVQQGISDGGGVLSGGAAPAASAGA
AAAQAGSDQRVCRLPAPLPPIKHEAESQALQPSPPTHSADIKPSPSSFED
MRRDFEQVSAAAVKPVDLCACMNFWHRLVDLPEDVRHDFEQRLEQLTRLS
PPAGGIEQFLVKHTGAAPAPPLWYTAGQRAKPKGAAKKASKGSITQYLNG
K*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017961DNA_pol_Y-fam_little_finger
IPR043128Rev_trsase/Diguanyl_cyclase
IPR001126UmuC
IPR036775DNA_pol_Y-fam_lit_finger_sf
IPR043502DNA/RNA_pol_sf