Trimin1|337744|MIX46507_184_56 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|337744
Unique Name	Trimin1\|337744\|MIX46507_184_56
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	1544

Homology

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BLAST of jgi.p|Trimin1|337744 vs. uniprot
Match: A0A835YHR5_9STRA (PH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHR5_9STRA)

HSP 1 Score: 1939 bits (5023), Expect = 0.000e+0
Identity = 1543/1543 (100.00%), Postives = 1543/1543 (100.00%), Query Frame = 0

Query:    1 MEEKLEGPLEVQPAGSLLFKKKPVTKFFTYEQGYFTCYTTRRDWQLGNPELTLDLARDVQSVEHKAGGRAFAVDCKESASAKSMVLKASTEPSCQMWVRVLKAAMSDAKSQLKYTGQVYCRRGSQHAYEEQQEDNTDWSTRLVTERFLIAANLEEDDRSGWISDRLNELLEGSASERAAAMRRTPVERACRGAHRVMADIEGLVADFDAEQENAQHCADLSPPARARLERFCHAWTTESQRIMLSRLLLELQPHMGVDAPRGXXXXXXXXXXXXXXXWHDAAALLSVAARVETVVRAVTPIAEGERIDIRAHLQDAGALTAAAVSAAAAEVEQRWSAAVAALCRGDADARASLAEPLIGTLEEGLRCLEGAPGVDTSALQSLATNCSLVFLGLMTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARDIEAFSIRRAEYVDRGIAQEVGGACAACARVCAVAVAEAFWRAGAAVSVGEALFSGAWRTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTTALLDAVVQWRNAQPATLPGTVRGAMDAVVALRLVTLYVAALISQAGHGGKRALGGDRGLDAVALEQVRKDCAVIEMDVRHWQEASAASRTTPKLNGAMQLLRGAGRFMAAFLLRWTERFMASPPPELLDAFAEAAVALSAAAAGAAALHLRLYDHLRTCLKLRGSAGVSSAARREVVSFAARREAFCHPERCAKHGRNTVFAHARAHDVNFTTNLLLAQVGAAAASSSLVALDANAGRCVLHRDRALLRRCQKPDGRKRMAKSGITPAAAAPTSARSELVALAAAAECIRQLEXXXXXXXXXXXXXXXXXXXXXXGALESLYPHAGQQHATGKRWALESGADAAATRLAAIAAIKRATVAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXARGDASMLSSAVTVVPVHXXXXXXXXXGTETYSDHGDRDLDAELAALDDYRDGDVDSASGGRGSTGGGSXXXXXXXXXXXXSLRRFSRGXXXXXGNAAGSAXXXXXXXXXXXXXXXXXXGSGVVGGTSVAVSNGSAXXXXXXXXXXXXXXAADDNERDLDVELAALGDFGDDDDDAADVSASGHDGYGASVTAADATLRRSPLASDRSAAAAAPXXXXXXXXXXXXXRRRSSGASFATASADSSYHSAAGVDSGVNVDETAAAAAPARRASASGLKRSFAGGLWGGAXXXXXXXXXXXGTESTXXXXXXXXXASVARPSPIPPPAAPAPVSELSTVPEAGGSFAAPASPVPPARAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWAAEPHVPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDHRSILWGSGESAQAXXXXXXXXXXXXXXXXXXXXXXXXXXVASDXXXXXXXXXXXXXXXXXPVLASAAGGRSPQKGAGSTAVRRVKPGSAAPDAKRGFGGNSAGNWM 1543
            MEEKLEGPLEVQPAGSLLFKKKPVTKFFTYEQGYFTCYTTRRDWQLGNPELTLDLARDVQSVEHKAGGRAFAVDCKESASAKSMVLKASTEPSCQMWVRVLKAAMSDAKSQLKYTGQVYCRRGSQHAYEEQQEDNTDWSTRLVTERFLIAANLEEDDRSGWISDRLNELLEGSASERAAAMRRTPVERACRGAHRVMADIEGLVADFDAEQENAQHCADLSPPARARLERFCHAWTTESQRIMLSRLLLELQPHMGVDAPRGXXXXXXXXXXXXXXXWHDAAALLSVAARVETVVRAVTPIAEGERIDIRAHLQDAGALTAAAVSAAAAEVEQRWSAAVAALCRGDADARASLAEPLIGTLEEGLRCLEGAPGVDTSALQSLATNCSLVFLGLMTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARDIEAFSIRRAEYVDRGIAQEVGGACAACARVCAVAVAEAFWRAGAAVSVGEALFSGAWRTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTTALLDAVVQWRNAQPATLPGTVRGAMDAVVALRLVTLYVAALISQAGHGGKRALGGDRGLDAVALEQVRKDCAVIEMDVRHWQEASAASRTTPKLNGAMQLLRGAGRFMAAFLLRWTERFMASPPPELLDAFAEAAVALSAAAAGAAALHLRLYDHLRTCLKLRGSAGVSSAARREVVSFAARREAFCHPERCAKHGRNTVFAHARAHDVNFTTNLLLAQVGAAAASSSLVALDANAGRCVLHRDRALLRRCQKPDGRKRMAKSGITPAAAAPTSARSELVALAAAAECIRQLEXXXXXXXXXXXXXXXXXXXXXXGALESLYPHAGQQHATGKRWALESGADAAATRLAAIAAIKRATVAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXARGDASMLSSAVTVVPVHXXXXXXXXXGTETYSDHGDRDLDAELAALDDYRDGDVDSASGGRGSTGGGSXXXXXXXXXXXXSLRRFSRGXXXXXGNAAGSAXXXXXXXXXXXXXXXXXXGSGVVGGTSVAVSNGSAXXXXXXXXXXXXXXAADDNERDLDVELAALGDFGDDDDDAADVSASGHDGYGASVTAADATLRRSPLASDRSAAAAAPXXXXXXXXXXXXXRRRSSGASFATASADSSYHSAAGVDSGVNVDETAAAAAPARRASASGLKRSFAGGLWGGAXXXXXXXXXXXGTESTXXXXXXXXXASVARPSPIPPPAAPAPVSELSTVPEAGGSFAAPASPVPPARAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWAAEPHVPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDHRSILWGSGESAQAXXXXXXXXXXXXXXXXXXXXXXXXXXVASDXXXXXXXXXXXXXXXXXPVLASAAGGRSPQKGAGSTAVRRVKPGSAAPDAKRGFGGNSAGNWM
Sbjct:    1 MEEKLEGPLEVQPAGSLLFKKKPVTKFFTYEQGYFTCYTTRRDWQLGNPELTLDLARDVQSVEHKAGGRAFAVDCKESASAKSMVLKASTEPSCQMWVRVLKAAMSDAKSQLKYTGQVYCRRGSQHAYEEQQEDNTDWSTRLVTERFLIAANLEEDDRSGWISDRLNELLEGSASERAAAMRRTPVERACRGAHRVMADIEGLVADFDAEQENAQHCADLSPPARARLERFCHAWTTESQRIMLSRLLLELQPHMGVDAPRGXXXXXXXXXXXXXXXWHDAAALLSVAARVETVVRAVTPIAEGERIDIRAHLQDAGALTAAAVSAAAAEVEQRWSAAVAALCRGDADARASLAEPLIGTLEEGLRCLEGAPGVDTSALQSLATNCSLVFLGLMTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARDIEAFSIRRAEYVDRGIAQEVGGACAACARVCAVAVAEAFWRAGAAVSVGEALFSGAWRTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTTALLDAVVQWRNAQPATLPGTVRGAMDAVVALRLVTLYVAALISQAGHGGKRALGGDRGLDAVALEQVRKDCAVIEMDVRHWQEASAASRTTPKLNGAMQLLRGAGRFMAAFLLRWTERFMASPPPELLDAFAEAAVALSAAAAGAAALHLRLYDHLRTCLKLRGSAGVSSAARREVVSFAARREAFCHPERCAKHGRNTVFAHARAHDVNFTTNLLLAQVGAAAASSSLVALDANAGRCVLHRDRALLRRCQKPDGRKRMAKSGITPAAAAPTSARSELVALAAAAECIRQLEXXXXXXXXXXXXXXXXXXXXXXGALESLYPHAGQQHATGKRWALESGADAAATRLAAIAAIKRATVAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXARGDASMLSSAVTVVPVHXXXXXXXXXGTETYSDHGDRDLDAELAALDDYRDGDVDSASGGRGSTGGGSXXXXXXXXXXXXSLRRFSRGXXXXXGNAAGSAXXXXXXXXXXXXXXXXXXGSGVVGGTSVAVSNGSAXXXXXXXXXXXXXXAADDNERDLDVELAALGDFGDDDDDAADVSASGHDGYGASVTAADATLRRSPLASDRSAAAAAPXXXXXXXXXXXXXRRRSSGASFATASADSSYHSAAGVDSGVNVDETAAAAAPARRASASGLKRSFAGGLWGGAXXXXXXXXXXXGTESTXXXXXXXXXASVARPSPIPPPAAPAPVSELSTVPEAGGSFAAPASPVPPARAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWAAEPHVPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDHRSILWGSGESAQAXXXXXXXXXXXXXXXXXXXXXXXXXXVASDXXXXXXXXXXXXXXXXXPVLASAAGGRSPQKGAGSTAVRRVKPGSAAPDAKRGFGGNSAGNWM 1543

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|337744 vs. uniprot

BLAST of jgi.p|Trimin1|337744 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835YHR5_9STRA	0.000e+0	100.00	PH domain-containing protein n=1 Tax=Tribonema min...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001849	Pleckstrin homology domain	SMART	SM00233	PH_update	coord: 3..108 e-value: 4.6E-4 score: 29.5
IPR011993	PH-like domain superfamily	GENE3D	2.30.29.30		coord: 1..117 e-value: 2.8E-5 score: 25.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 963..987
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1225..1543
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1465..1481
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1324..1338
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 924..1059
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1041..1059
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1072..1098
None	No IPR available	SUPERFAMILY	50729	PH domain-like	coord: 6..112

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_9	contig	Contig_9:537997..553034 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|337744	mRNA_3549	Tribonema minus UTEX_B_3156	mRNA	Contig_9 537857..553154 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|337744|MIX46507_184_56 ID=Trimin1|337744|MIX46507_184_56|Name=jgi.p|Trimin1|337744|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1544bp
MEEKLEGPLEVQPAGSLLFKKKPVTKFFTYEQGYFTCYTTRRDWQLGNPE
LTLDLARDVQSVEHKAGGRAFAVDCKESASAKSMVLKASTEPSCQMWVRV
LKAAMSDAKSQLKYTGQVYCRRGSQHAYEEQQEDNTDWSTRLVTERFLIA
ANLEEDDRSGWISDRLNELLEGSASERAAAMRRTPVERACRGAHRVMADI
EGLVADFDAEQENAQHCADLSPPARARLERFCHAWTTESQRIMLSRLLLE
LQPHMGVDAPRGGGGGGGGGGGGAAAAWHDAAALLSVAARVETVVRAVTP
IAEGERIDIRAHLQDAGALTAAAVSAAAAEVEQRWSAAVAALCRGDADAR
ASLAEPLIGTLEEGLRCLEGAPGVDTSALQSLATNCSLVFLGLMTAAAAQ
PPPLSEPPSGGSTDAACLHFAAAAAAAARDIEAFSIRRAEYVDRGIAQEV
GGACAACARVCAVAVAEAFWRAGAAVSVGEALFSGAWRTGEAFWRAGAAA
SVGEALFSGTWRTGEAFWRAGAAASVGEALFSGAWRMGEVTTALLDAVVQ
WRNAQPATLPGTVRGAMDAVVALRLVTLYVAALISQAGHGGKRALGGDRG
LDAVALEQVRKDCAVIEMDVRHWQEASAASRTTPKLNGAMQLLRGAGRFM
AAFLLRWTERFMASPPPELLDAFAEAAVALSAAAAGAAALHLRLYDHLRT
CLKLRGSAGVSSAARREVVSFAARREAFCHPERCAKHGRNTVFAHARAHD
VNFTTNLLLAQVGAAAASSSLVALDANAGRCVLHRDRALLRRCQKPDGRK
RMAKSGITPAAAAPTSARSELVALAAAAECIRQLEQQQQQAAPRAKSPAA
QAAAAAAGALESLYPHAGQQHATGKRWALESGADAAATRLAAIAAIKRAT
VAVAAAAATAAAAAAAAAAAEAAHEEESPPRARGDASMLSSAVTVVPVHR
HAGGGSGGGTETYSDHGDRDLDAELAALDDYRDGDVDSASGGRGSTGGGS
DSAAAGRNGFGGSLRRFSRGGSGGGGNAAGSAGAGGSVRGSHRAGSSSRG
GSGVVGGTSVAVSNGSAGTSGAAGGAGGRGGAADDNERDLDVELAALGDF
GDDDDDAADVSASGHDGYGASVTAADATLRRSPLASDRSAAAAAPWSAAA
AGPSSRAPRRRSSGASFATASADSSYHSAAGVDSGVNVDETAAAAAPARR
ASASGLKRSFAGGLWGGAGGGGGGDGAAAGTESTAGGAAGADGASVARPS
PIPPPAAPAPVSELSTVPEAGGSFAAPASPVPPARAAAAAAPAPEGGGAA
SGTTASRRRSFAGGGLGSGGGRSSGGGDSPTVAGSAQPPKPQSPFAAPPS
VAAPAAIGSGGGGGGGGSGGGSGGGGGRGGKQKRAFGGGVWAAEPHVPAA
SAVALPPAYDAAQRQQQQQQQSAQPPAAPPQPPVVDHRSILWGSGESAQA
QPTPPPRSRTVAAAAAAPMQQQQQQQVASDNRAILWGGAQAAAAQTSPVL
ASAAGGRSPQKGAGSTAVRRVKPGSAAPDAKRGFGGNSAGNWM*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001849	PH_domain
IPR011993	PH-like_dom_sf