Trimin1|337728|MIX46491_4_21 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|337728
Unique NameTrimin1|337728|MIX46491_4_21
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length205
Homology
[Close]
BLAST of jgi.p|Trimin1|337728 vs. uniprot
Match: A0A835YL45_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL45_9STRA)

HSP 1 Score: 244 bits (622), Expect = 4.100e-79
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0 
Query:    1 MARMRSYPIAPDAQHAPAACPALPPYKSPALTGGAGAARGXXXXXXXXXXXXXXXGTRXXXXXXXXXXXXXXXXXXAYTQRAAGARPAXXXXXXXAPRVAAPAPLYLAPERGAIETSASQLMAWLAAKGGASGTGAARGAAXXXXXXXXXXXXXXXXXXXYGGTHRAFGVRKRGASPNNTDGGSPRSLKRQRGSGGGGGSTGAL 204
            MARMRSYPIAPDAQHAPAACPALPPYKSPALTGGAGAARGXXXXXXXXXXXXXXXGTRXXXXXXXXXXXXXXXXXXAYTQRAAGARPAXXXXXXXAPRVAAPAPLYLAPERGAIETSASQLMAWLAAKGGASGTGAARGAAXXXXXXXXXXXXXXXXXXXYGGTHRAFGVRKRGASPNNTDGGSPRSLKRQRGSGGGGGSTGAL
Sbjct:    1 MARMRSYPIAPDAQHAPAACPALPPYKSPALTGGAGAARGXXXXXXXXXXXXXXXGTRXXXXXXXXXXXXXXXXXXAYTQRAAGARPAXXXXXXXAPRVAAPAPLYLAPERGAIETSASQLMAWLAAKGGASGTGAARGAAXXXXXXXXXXXXXXXXXXXYGGTHRAFGVRKRGASPNNTDGGSPRSLKRQRGSGGGGGSTGAL 204
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|337728 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YL45_9STRA4.100e-79100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 160..204

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_9contigContig_9:383280..383955 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|337728mRNA_3540Tribonema minus UTEX_B_3156 mRNAContig_9 383280..383955 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|337728|MIX46491_4_21 ID=Trimin1|337728|MIX46491_4_21|Name=jgi.p|Trimin1|337728|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=205bp
MARMRSYPIAPDAQHAPAACPALPPYKSPALTGGAGAARGGYGGGSSGGG
WHSTTGTRGASGAGTGAAAAAAAGGGAYTQRAAGARPAGVAAAAAAPRVA
APAPLYLAPERGAIETSASQLMAWLAAKGGASGTGAARGAAGGGSSGAGA
AAPRGVGASSYGGTHRAFGVRKRGASPNNTDGGSPRSLKRQRGSGGGGGS
TGAL*
back to top