Trimin1|337407|MIX46170_2_2 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|337407
Unique Name	Trimin1\|337407\|MIX46170_2_2
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	1350

Homology

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BLAST of jgi.p|Trimin1|337407 vs. uniprot
Match: A0A835YHQ9_9STRA (Npa1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHQ9_9STRA)

HSP 1 Score: 1937 bits (5017), Expect = 0.000e+0
Identity = 1350/1350 (100.00%), Postives = 1350/1350 (100.00%), Query Frame = 0

Query:    1 MALALGIAEGRVALSESWVLDVVDFTAILNSDNETVLVQGLGRAAAQIRREHDSLLLPEDRDDVADADGXXXXXXXXXXRGGASDARSSGAPLGLLGAYLAASPDAAELFVLFDLDQRNKSRALTAAHTDLLAAAVACLAXXXXXXXXXXXXXAGAALCRRLLKERLPALQQQLAGAGGEAAERATLALLAALARFNRTSARELSRHVAFGGRAFARLAAKRGAAXXXXXXXXXXXLALLPTVRGIARSGDGDGEWRPDVRHACVRLLAALFDGGDAAVRARLLAPAARRPGSAALSQALRAPLAEDAAPTALLVLRLMDQYVLRAPVQRSGXXXXXXXAQRARVSFFCADAMDALRAAAFESPHARVRKRSLTLLTALLTDAALSPFLSHAAGVAAAXXXXXXXXXLPEPPRAVARAALLLPAQSDAAARALLVAVLRATPPLLAPFLESLSAASLEPRATPRCLRGYALLAEVLRCAPLPRGDLSGAAAAALAALVLPPALGKKEFTKGILSPSPLVQASTLTLLCAALARAGALLRRLSAAADARAALSAQLRAQLPEVQTILALRARLDPFTAPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTYIYGRALAALRLYARHLPAAVDAARFDLLKLLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVKPGEGVAAAAPAKAVXXXXXXXPLAVVLRAMLAAERGGEGDGERAAARQAAISGLLSTGLFCVAGAAAEGEAQLWVDERRRMLYDLIAPRDVNLHRAQQTVSARPQRIADAPPLPPPPLPPQASEDGIPALLALTQAAHADRHRLALRGIEGAERGARALGAALAPDFNIEFSPLLVAALDALAAGGXXXXXXXXXXXXXXXXXXXXXXXXSELRRLAANVAFRSLHLHADPAPLAGVIESALGGAXXXXXXXAHVNGGTGDMGLARYARALLGAAPWPAEAAALSPGDFCRSAFSAAFDEVGAGGXXXXXXXXXXXXXVEEEPMWRVLAQAFMPTGGGGSGSTCALARPEVEGVVARRLRRLHAAELPLAARQACAQLRLLLSRRGGSGSGGAEEVLVAALRLLSVAVLSAAAMDTRDTALDTFGDSGGIDDSPLGAAPAAGSXXXXXXXXADMLPQLLSIVFGDSFIVDVALRGKLGHEAGRHMCAALVALLRTCSEAAAXXXXXXXXXXXXXXXXXEARVWQTPAVRAFLEALCAAAAAAALQPDAKGDDALRALAAPLHACADRCGSAALSRVVRALLHGLHASGCGADSIGGGDIXXXXXXXXXXXXAARALLEQLLEQAECEQREGRGGLSLISDDD 1350
            MALALGIAEGRVALSESWVLDVVDFTAILNSDNETVLVQGLGRAAAQIRREHDSLLLPEDRDDVADADGXXXXXXXXXXRGGASDARSSGAPLGLLGAYLAASPDAAELFVLFDLDQRNKSRALTAAHTDLLAAAVACLAXXXXXXXXXXXXXAGAALCRRLLKERLPALQQQLAGAGGEAAERATLALLAALARFNRTSARELSRHVAFGGRAFARLAAKRGAAXXXXXXXXXXXLALLPTVRGIARSGDGDGEWRPDVRHACVRLLAALFDGGDAAVRARLLAPAARRPGSAALSQALRAPLAEDAAPTALLVLRLMDQYVLRAPVQRSGXXXXXXXAQRARVSFFCADAMDALRAAAFESPHARVRKRSLTLLTALLTDAALSPFLSHAAGVAAAXXXXXXXXXLPEPPRAVARAALLLPAQSDAAARALLVAVLRATPPLLAPFLESLSAASLEPRATPRCLRGYALLAEVLRCAPLPRGDLSGAAAAALAALVLPPALGKKEFTKGILSPSPLVQASTLTLLCAALARAGALLRRLSAAADARAALSAQLRAQLPEVQTILALRARLDPFTAPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTYIYGRALAALRLYARHLPAAVDAARFDLLKLLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVKPGEGVAAAAPAKAVXXXXXXXPLAVVLRAMLAAERGGEGDGERAAARQAAISGLLSTGLFCVAGAAAEGEAQLWVDERRRMLYDLIAPRDVNLHRAQQTVSARPQRIADAPPLPPPPLPPQASEDGIPALLALTQAAHADRHRLALRGIEGAERGARALGAALAPDFNIEFSPLLVAALDALAAGGXXXXXXXXXXXXXXXXXXXXXXXXSELRRLAANVAFRSLHLHADPAPLAGVIESALGGAXXXXXXXAHVNGGTGDMGLARYARALLGAAPWPAEAAALSPGDFCRSAFSAAFDEVGAGGXXXXXXXXXXXXXVEEEPMWRVLAQAFMPTGGGGSGSTCALARPEVEGVVARRLRRLHAAELPLAARQACAQLRLLLSRRGGSGSGGAEEVLVAALRLLSVAVLSAAAMDTRDTALDTFGDSGGIDDSPLGAAPAAGSXXXXXXXXADMLPQLLSIVFGDSFIVDVALRGKLGHEAGRHMCAALVALLRTCSEAAAXXXXXXXXXXXXXXXXXEARVWQTPAVRAFLEALCAAAAAAALQPDAKGDDALRALAAPLHACADRCGSAALSRVVRALLHGLHASGCGADSIGGGDIXXXXXXXXXXXXAARALLEQLLEQAECEQREGRGGLSLISDDD
Sbjct:    1 MALALGIAEGRVALSESWVLDVVDFTAILNSDNETVLVQGLGRAAAQIRREHDSLLLPEDRDDVADADGXXXXXXXXXXRGGASDARSSGAPLGLLGAYLAASPDAAELFVLFDLDQRNKSRALTAAHTDLLAAAVACLAXXXXXXXXXXXXXAGAALCRRLLKERLPALQQQLAGAGGEAAERATLALLAALARFNRTSARELSRHVAFGGRAFARLAAKRGAAXXXXXXXXXXXLALLPTVRGIARSGDGDGEWRPDVRHACVRLLAALFDGGDAAVRARLLAPAARRPGSAALSQALRAPLAEDAAPTALLVLRLMDQYVLRAPVQRSGXXXXXXXAQRARVSFFCADAMDALRAAAFESPHARVRKRSLTLLTALLTDAALSPFLSHAAGVAAAXXXXXXXXXLPEPPRAVARAALLLPAQSDAAARALLVAVLRATPPLLAPFLESLSAASLEPRATPRCLRGYALLAEVLRCAPLPRGDLSGAAAAALAALVLPPALGKKEFTKGILSPSPLVQASTLTLLCAALARAGALLRRLSAAADARAALSAQLRAQLPEVQTILALRARLDPFTAPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTYIYGRALAALRLYARHLPAAVDAARFDLLKLLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVKPGEGVAAAAPAKAVXXXXXXXPLAVVLRAMLAAERGGEGDGERAAARQAAISGLLSTGLFCVAGAAAEGEAQLWVDERRRMLYDLIAPRDVNLHRAQQTVSARPQRIADAPPLPPPPLPPQASEDGIPALLALTQAAHADRHRLALRGIEGAERGARALGAALAPDFNIEFSPLLVAALDALAAGGXXXXXXXXXXXXXXXXXXXXXXXXSELRRLAANVAFRSLHLHADPAPLAGVIESALGGAXXXXXXXAHVNGGTGDMGLARYARALLGAAPWPAEAAALSPGDFCRSAFSAAFDEVGAGGXXXXXXXXXXXXXVEEEPMWRVLAQAFMPTGGGGSGSTCALARPEVEGVVARRLRRLHAAELPLAARQACAQLRLLLSRRGGSGSGGAEEVLVAALRLLSVAVLSAAAMDTRDTALDTFGDSGGIDDSPLGAAPAAGSXXXXXXXXADMLPQLLSIVFGDSFIVDVALRGKLGHEAGRHMCAALVALLRTCSEAAAXXXXXXXXXXXXXXXXXEARVWQTPAVRAFLEALCAAAAAAALQPDAKGDDALRALAAPLHACADRCGSAALSRVVRALLHGLHASGCGADSIGGGDIXXXXXXXXXXXXAARALLEQLLEQAECEQREGRGGLSLISDDD 1350

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|337407 vs. uniprot

BLAST of jgi.p|Trimin1|337407 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835YHQ9_9STRA	0.000e+0	100.00	Npa1 domain-containing protein n=1 Tax=Tribonema m...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021714	Nucleolar pre-ribosomal-associated protein 1, N-terminal	PFAM	PF11707	Npa1	coord: 107..325 e-value: 5.7E-11 score: 42.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 804..831
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..83
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 816..831
IPR039844	Nucleolar pre-ribosomal-associated protein 1	PANTHER	PTHR13500	NUCLEOLAR PRERIBOSOMAL-ASSOCIATED PROTEIN 1	coord: 95..964

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_89	contig	Contig_89:417..6269 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|337407	mRNA_12771	Tribonema minus UTEX_B_3156	mRNA	Contig_89 417..6269 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|337407|MIX46170_2_2 ID=Trimin1|337407|MIX46170_2_2|Name=jgi.p|Trimin1|337407|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1350bp
MALALGIAEGRVALSESWVLDVVDFTAILNSDNETVLVQGLGRAAAQIRR
EHDSLLLPEDRDDVADADGGGGGGGAASQRGGASDARSSGAPLGLLGAYL
AASPDAAELFVLFDLDQRNKSRALTAAHTDLLAAAVACLAAAARGRAASA
ATAAGAALCRRLLKERLPALQQQLAGAGGEAAERATLALLAALARFNRTS
ARELSRHVAFGGRAFARLAAKRGAAAAAPSAAAAAALALLPTVRGIARSG
DGDGEWRPDVRHACVRLLAALFDGGDAAVRARLLAPAARRPGSAALSQAL
RAPLAEDAAPTALLVLRLMDQYVLRAPVQRSGGGGGGGAAQRARVSFFCA
DAMDALRAAAFESPHARVRKRSLTLLTALLTDAALSPFLSHAAGVAAAGA
GAAAAAALPEPPRAVARAALLLPAQSDAAARALLVAVLRATPPLLAPFLE
SLSAASLEPRATPRCLRGYALLAEVLRCAPLPRGDLSGAAAAALAALVLP
PALGKKEFTKGILSPSPLVQASTLTLLCAALARAGALLRRLSAAADARAA
LSAQLRAQLPEVQTILALRARLDPFTAPAAAAAAAGSAAVAAKEAAGAMG
GDGATEETEAQETQTTYIYGRALAALRLYARHLPAAVDAARFDLLKLLPP
AAALAAAPPLLRRALLALLAEARAPPGAWLAAPKAAAAAGGGGGDGAAAA
SAAAAAVKPGEGVAAAAPAKAVAAAVAEAPLAVVLRAMLAAERGGEGDGE
RAAARQAAISGLLSTGLFCVAGAAAEGEAQLWVDERRRMLYDLIAPRDVN
LHRAQQTVSARPQRIADAPPLPPPPLPPQASEDGIPALLALTQAAHADRH
RLALRGIEGAERGARALGAALAPDFNIEFSPLLVAALDALAAGGSSSGGG
SGGGGGSGSGSDSGGGGGSELRRLAANVAFRSLHLHADPAPLAGVIESAL
GGAAAAAAAAAHVNGGTGDMGLARYARALLGAAPWPAEAAALSPGDFCRS
AFSAAFDEVGAGGGRGAMAAAAAAASVEEEPMWRVLAQAFMPTGGGGSGS
TCALARPEVEGVVARRLRRLHAAELPLAARQACAQLRLLLSRRGGSGSGG
AEEVLVAALRLLSVAVLSAAAMDTRDTALDTFGDSGGIDDSPLGAAPAAG
SGGGSSAAAADMLPQLLSIVFGDSFIVDVALRGKLGHEAGRHMCAALVAL
LRTCSEAAAEAAVEASAASAAAAAAAEARVWQTPAVRAFLEALCAAAAAA
ALQPDAKGDDALRALAAPLHACADRCGSAALSRVVRALLHGLHASGCGAD
SIGGGDIGGGSSGSGGGGGAARALLEQLLEQAECEQREGRGGLSLISDDD

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR021714	Npa1_N
IPR039844	URB1