Trimin1|337388|MIX46151_86_36 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|337388
Unique Name	Trimin1\|337388\|MIX46151_86_36
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	1154

Homology

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BLAST of jgi.p|Trimin1|337388 vs. uniprot
Match: A0A836C8B3_9STRA (Chorein N-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8B3_9STRA)

HSP 1 Score: 2114 bits (5478), Expect = 0.000e+0
Identity = 1153/1153 (100.00%), Postives = 1153/1153 (100.00%), Query Frame = 0

Query:    1 MLGLAAMIQRGLMAMAMEFCEVQDSNAASLGERSMLDDHFDLSDLLLKRHALRQLGLPLTVVAGKIGRVRLRGLSAVLTGGTITLEIEDVYLVVAPCGDAADPDAAIAVRRFWLACREKFKGPDARYRNYFLEAALRLKPNWRDKNARKTALRRRVQTYVTKKLVAGGQVTVRRLHVRIECAAAHGGSSAQKGLCDAAFGLQVPLLSVVNCAAADATFALDASGTPVTADPLKGAAASYVHKRLEIKGLQAYVDKGVASYTHAAAGGGGVGGTWDVFGDDWQREGRHLLVVRPLDITAAATVRQVEVKVPAGAAGKSKKNRLLFLPKALSCTCSALVTTLSTQQVVLVAQLASALAQRARQLRYARRVPRGSAAVRALPPAVLLPGANRDGAAPPSDQPEGSQGEVDKLLPHLAWPAEGGGGQLQVEVGGSGGAXGALEFMIGELGAGGRARNLWRYACACVRAHVRARSRDWAAELLRQVESHRPPPQQQQLRQRLSAAPAALRQAARYVSLFARTLPTHVTAPNAAVDLQRLAVPPLPLLSKREQLELADLDAALRTDQILFLRAGARVSAHLAATSSSSKGKAGGAQGRVAWPPEGLVALLHSLLLIRLARIEAKAAAKAAEAVDGVEEDAGGSTDDQGMDAMVMDYFSKDGQKLDKVQNEQFSDDESDDESVVESDDEAEQAGLMTDAESTPLAAAKTNAAPTQVAGLLGSMLQAARTYVIIEAASLELSAPPADGSASATPLLRGSVGTAALRLYGSTAQQVGWWEASVARAQAQCWQADVRHWHDLFAAGAAKGGDAQQQMLLLRLVFDPKRQLCPLFAPGGSHSVQVNASAPLAATGLSSPPLSNSSSSASGLAASRAGLLAQLRCHAVLGPWAVSLPADLTTNVISTWLNAPVDVRNGAALRGVRGGXXXXXXXXXXXXXXXAAAVCEALVALCSADLEPGLRTVYSPFTGPGKNKRVAEGSGETALAVTQWVISALHRAGVMPPLLQDMVQQADVEGVIVQLLHCMLPHDFDLKVRLPQAVVNVGATARSTIAAAETCASILGVRDAQQQGCVADDGGGAASEANSMPAALDDGLSMHLLVDSVGLDVCSSNATELWIQTNSSKCRLRATEQALRMVAGSLVGGTISLRHALAAAVELEQCSSE 1153
            MLGLAAMIQRGLMAMAMEFCEVQDSNAASLGERSMLDDHFDLSDLLLKRHALRQLGLPLTVVAGKIGRVRLRGLSAVLTGGTITLEIEDVYLVVAPCGDAADPDAAIAVRRFWLACREKFKGPDARYRNYFLEAALRLKPNWRDKNARKTALRRRVQTYVTKKLVAGGQVTVRRLHVRIECAAAHGGSSAQKGLCDAAFGLQVPLLSVVNCAAADATFALDASGTPVTADPLKGAAASYVHKRLEIKGLQAYVDKGVASYTHAAAGGGGVGGTWDVFGDDWQREGRHLLVVRPLDITAAATVRQVEVKVPAGAAGKSKKNRLLFLPKALSCTCSALVTTLSTQQVVLVAQLASALAQRARQLRYARRVPRGSAAVRALPPAVLLPGANRDGAAPPSDQPEGSQGEVDKLLPHLAWPAEGGGGQLQVEVGGSGGAXGALEFMIGELGAGGRARNLWRYACACVRAHVRARSRDWAAELLRQVESHRPPPQQQQLRQRLSAAPAALRQAARYVSLFARTLPTHVTAPNAAVDLQRLAVPPLPLLSKREQLELADLDAALRTDQILFLRAGARVSAHLAATSSSSKGKAGGAQGRVAWPPEGLVALLHSLLLIRLARIEAKAAAKAAEAVDGVEEDAGGSTDDQGMDAMVMDYFSKDGQKLDKVQNEQFSDDESDDESVVESDDEAEQAGLMTDAESTPLAAAKTNAAPTQVAGLLGSMLQAARTYVIIEAASLELSAPPADGSASATPLLRGSVGTAALRLYGSTAQQVGWWEASVARAQAQCWQADVRHWHDLFAAGAAKGGDAQQQMLLLRLVFDPKRQLCPLFAPGGSHSVQVNASAPLAATGLSSPPLSNSSSSASGLAASRAGLLAQLRCHAVLGPWAVSLPADLTTNVISTWLNAPVDVRNGAALRGVRGGXXXXXXXXXXXXXXXAAAVCEALVALCSADLEPGLRTVYSPFTGPGKNKRVAEGSGETALAVTQWVISALHRAGVMPPLLQDMVQQADVEGVIVQLLHCMLPHDFDLKVRLPQAVVNVGATARSTIAAAETCASILGVRDAQQQGCVADDGGGAASEANSMPAALDDGLSMHLLVDSVGLDVCSSNATELWIQTNSSKCRLRATEQALRMVAGSLVGGTISLRHALAAAVELEQCSSE
Sbjct:    1 MLGLAAMIQRGLMAMAMEFCEVQDSNAASLGERSMLDDHFDLSDLLLKRHALRQLGLPLTVVAGKIGRVRLRGLSAVLTGGTITLEIEDVYLVVAPCGDAADPDAAIAVRRFWLACREKFKGPDARYRNYFLEAALRLKPNWRDKNARKTALRRRVQTYVTKKLVAGGQVTVRRLHVRIECAAAHGGSSAQKGLCDAAFGLQVPLLSVVNCAAADATFALDASGTPVTADPLKGAAASYVHKRLEIKGLQAYVDKGVASYTHAAAGGGGVGGTWDVFGDDWQREGRHLLVVRPLDITAAATVRQVEVKVPAGAAGKSKKNRLLFLPKALSCTCSALVTTLSTQQVVLVAQLASALAQRARQLRYARRVPRGSAAVRALPPAVLLPGANRDGAAPPSDQPEGSQGEVDKLLPHLAWPAEGGGGQLQVEVGGSGGAXGALEFMIGELGAGGRARNLWRYACACVRAHVRARSRDWAAELLRQVESHRPPPQQQQLRQRLSAAPAALRQAARYVSLFARTLPTHVTAPNAAVDLQRLAVPPLPLLSKREQLELADLDAALRTDQILFLRAGARVSAHLAATSSSSKGKAGGAQGRVAWPPEGLVALLHSLLLIRLARIEAKAAAKAAEAVDGVEEDAGGSTDDQGMDAMVMDYFSKDGQKLDKVQNEQFSDDESDDESVVESDDEAEQAGLMTDAESTPLAAAKTNAAPTQVAGLLGSMLQAARTYVIIEAASLELSAPPADGSASATPLLRGSVGTAALRLYGSTAQQVGWWEASVARAQAQCWQADVRHWHDLFAAGAAKGGDAQQQMLLLRLVFDPKRQLCPLFAPGGSHSVQVNASAPLAATGLSSPPLSNSSSSASGLAASRAGLLAQLRCHAVLGPWAVSLPADLTTNVISTWLNAPVDVRNGAALRGVRGGXXXXXXXXXXXXXXXAAAVCEALVALCSADLEPGLRTVYSPFTGPGKNKRVAEGSGETALAVTQWVISALHRAGVMPPLLQDMVQQADVEGVIVQLLHCMLPHDFDLKVRLPQAVVNVGATARSTIAAAETCASILGVRDAQQQGCVADDGGGAASEANSMPAALDDGLSMHLLVDSVGLDVCSSNATELWIQTNSSKCRLRATEQALRMVAGSLVGGTISLRHALAAAVELEQCSSE 1153

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|337388 vs. uniprot

BLAST of jgi.p|Trimin1|337388 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A836C8B3_9STRA	0.000e+0	100.00	Chorein N-terminal domain-containing protein n=1 T...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026854	Vacuolar protein sorting-associated protein 13-like, N-terminal domain	PFAM	PF12624	Chorein_N	coord: 34..106 e-value: 9.4E-8 score: 32.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 658..695
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 666..687
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 386..408

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_88	contig	Contig_88:546532..553931 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|337388	mRNA_11076	Tribonema minus UTEX_B_3156	mRNA	Contig_88 546488..553931 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|337388|MIX46151_86_36 ID=Trimin1|337388|MIX46151_86_36|Name=jgi.p|Trimin1|337388|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1154bp
MLGLAAMIQRGLMAMAMEFCEVQDSNAASLGERSMLDDHFDLSDLLLKRH
ALRQLGLPLTVVAGKIGRVRLRGLSAVLTGGTITLEIEDVYLVVAPCGDA
ADPDAAIAVRRFWLACREKFKGPDARYRNYFLEAALRLKPNWRDKNARKT
ALRRRVQTYVTKKLVAGGQVTVRRLHVRIECAAAHGGSSAQKGLCDAAFG
LQVPLLSVVNCAAADATFALDASGTPVTADPLKGAAASYVHKRLEIKGLQ
AYVDKGVASYTHAAAGGGGVGGTWDVFGDDWQREGRHLLVVRPLDITAAA
TVRQVEVKVPAGAAGKSKKNRLLFLPKALSCTCSALVTTLSTQQVVLVAQ
LASALAQRARQLRYARRVPRGSAAVRALPPAVLLPGANRDGAAPPSDQPE
GSQGEVDKLLPHLAWPAEGGGGQLQVEVGGSGGAGGALEFMIGELGAGGR
ARNLWRYACACVRAHVRARSRDWAAELLRQVESHRPPPQQQQLRQRLSAA
PAALRQAARYVSLFARTLPTHVTAPNAAVDLQRLAVPPLPLLSKREQLEL
ADLDAALRTDQILFLRAGARVSAHLAATSSSSKGKAGGAQGRVAWPPEGL
VALLHSLLLIRLARIEAKAAAKAAEAVDGVEEDAGGSTDDQGMDAMVMDY
FSKDGQKLDKVQNEQFSDDESDDESVVESDDEAEQAGLMTDAESTPLAAA
KTNAAPTQVAGLLGSMLQAARTYVIIEAASLELSAPPADGSASATPLLRG
SVGTAALRLYGSTAQQVGWWEASVARAQAQCWQADVRHWHDLFAAGAAKG
GDAQQQMLLLRLVFDPKRQLCPLFAPGGSHSVQVNASAPLAATGLSSPPL
SNSSSSASGLAASRAGLLAQLRCHAVLGPWAVSLPADLTTNVISTWLNAP
VDVRNGAALRGVRGGGSGGGGSGGGGGSSVAAAVCEALVALCSADLEPGL
RTVYSPFTGPGKNKRVAEGSGETALAVTQWVISALHRAGVMPPLLQDMVQ
QADVEGVIVQLLHCMLPHDFDLKVRLPQAVVNVGATARSTIAAAETCASI
LGVRDAQQQGCVADDGGGAASEANSMPAALDDGLSMHLLVDSVGLDVCSS
NATELWIQTNSSKCRLRATEQALRMVAGSLVGGTISLRHALAAAVELEQC
SSE*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR026854	VPS13-like_N