Trimin1|337158|MIX45921_3_23 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|337158
Unique NameTrimin1|337158|MIX45921_3_23
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length208
Homology
BLAST of jgi.p|Trimin1|337158 vs. uniprot
Match: A0A836C924_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C924_9STRA)

HSP 1 Score: 372 bits (954), Expect = 1.450e-129
Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 0
Query:    1 MEAAAAAVDSVVDAAADLIVIDEAEASLPAVAAXXXXXXXXXXXXXXXXXPPILWEDDDRLAPYTVVEREGAIYKYYVIVEHPTDNTKLLAFCKLLPIKLDSRKRDIATTGTTEVKEYNFGKKLPFLHLTSDFWTAKHQNKAYGTVVVAFVNNQWELCIRTLGTCYMGGTKTADRLARWVAFVLRKATGLKMDSVVSCTSDGASDMK 207
            MEAAAAAVDSVVDAAADLIVIDEAEASLPAVAAXXXXXXXXXXXXXXXXXPPILWEDDDRLAPYTVVEREGAIYKYYVIVEHPTDNTKLLAFCKLLPIKLDSRKRDIATTGTTEVKEYNFGKKLPFLHLTSDFWTAKHQNKAYGTVVVAFVNNQWELCIRTLGTCYMGGTKTADRLARWVAFVLRKATGLKMDSVVSCTSDGASDMK
Sbjct:    1 MEAAAAAVDSVVDAAADLIVIDEAEASLPAVAAXXXXXXXXXXXXXXXXXPPILWEDDDRLAPYTVVEREGAIYKYYVIVEHPTDNTKLLAFCKLLPIKLDSRKRDIATTGTTEVKEYNFGKKLPFLHLTSDFWTAKHQNKAYGTVVVAFVNNQWELCIRTLGTCYMGGTKTADRLARWVAFVLRKATGLKMDSVVSCTSDGASDMK 207          
BLAST of jgi.p|Trimin1|337158 vs. uniprot
Match: A0A835Z2V7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2V7_9STRA)

HSP 1 Score: 231 bits (588), Expect = 9.020e-67
Identity = 135/294 (45.92%), Postives = 148/294 (50.34%), Query Frame = 0
Query:   51 PPILWEDDDRLAPYTVVEREGAIYKYYVIVEHPTDNTKLLAFCKLLPIKLDSRKRDI---------------------------------------ATTGTT--------------------------------------------------------------------------------------------------EVKEYNFGKKLPFLHLTSDFWTAKHQNKAYGTVVVAFVNNQWELCIRTLGTCYMGGTKTADRLARWVAFVLRKATGLKMDSVVSCTSDGASDMK 207
            PPILWEDDDRLAPYTVVEREG+IY+YYV+VEHPTD+TKLLAFCKLLPIK+D+RKRDI                                       A +G T                                                                                                  EV +YN GKKLPFLHLT DFWTAKHQN+AYGTVVVAF+N+QWE C+RTLGTC MGGTKTADRLARW+ FVL KATGLKMDSVVSCTSDGASDMK
Sbjct:   90 PPILWEDDDRLAPYTVVEREGSIYQYYVVVEHPTDSTKLLAFCKLLPIKMDARKRDIVHHREFDRASNSNLWNHLQATFPDLCAQLKQEKKDEKKDAGSGGTKAVVQQPRGQGTLDAWTQLAKNQAATNSEAVFLWGLVIFCAAQNISFAVCLSRRLNSLLQLAGCKYSLPTRYTFHKRLVEVYSHCCERLRATVQEAAAEVNDYNLGKKLPFLHLTCDFWTAKHQNQAYGTVVVAFINSQWEFCVRTLGTCSMGGTKTADRLARWMLFVLHKATGLKMDSVVSCTSDGASDMK 383          
BLAST of jgi.p|Trimin1|337158 vs. uniprot
Match: A0A836CBV0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBV0_9STRA)

HSP 1 Score: 191 bits (484), Expect = 4.630e-54
Identity = 126/215 (58.60%), Postives = 128/215 (59.53%), Query Frame = 0
Query:   17 DLIVIDEAEASLPAVAAXXXXXXXXXXXXXXXXXPPILWEDDDRLAPYTVVEREGAIYKYYVIVEHPTDNTKLLAFCKLLPIKLDSRKRDI-----------------------------------ATTG-------------------------------TTEVKEYNFGKKLPFLHLTSDFWTAKHQNKAYGTVVVA------FVNNQWELCI 159
            DLIVIDE EASLPAVAA     XXXXXXXXXXX PPILWEDDD LAPYTVVEREGAIYKYYVIVEHPTDNTKLLAFCKLLPIKLDSRKRDI                                   A +G                                TEVKEYNFGKKLPFLHLTSDFWTAKHQNKAYGTVVVA      F  N W  C+
Sbjct:   90 DLIVIDETEASLPAVAAAAAGPXXXXXXXXXXXDPPILWEDDDSLAPYTVVEREGAIYKYYVIVEHPTDNTKLLAFCKLLPIKLDSRKRDIVHHRNFDKASNSNLWGHLQATFPDLCARLKQEKKEAESGGIKKAEQQQQSVARGRGTLDGWMQLAQKQQAATEVKEYNFGKKLPFLHLTSDFWTAKHQNKAYGTVVVAALFTKEFTGNDWTHCM 304          
BLAST of jgi.p|Trimin1|337158 vs. uniprot
Match: A0A835ZCQ4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCQ4_9STRA)

HSP 1 Score: 138 bits (348), Expect = 2.180e-37
Identity = 88/90 (97.78%), Postives = 88/90 (97.78%), Query Frame = 0
Query:   18 LIVIDEAEASLPAVAAXXXXXXXXXXXXXXXXXPPILWEDDDRLAPYTVVEREGAIYKYYVIVEHPTDNTKLLAFCKLLPIKLDSRKRDI 107
            LIVIDEAEASLPAVAAXXXXXXXXXXXXXXXX PPILWEDDDRLAPYTVVE EGAIYKYYVIVEHPTDNTKLLAFCKLLPIKLDSRKRDI
Sbjct:  102 LIVIDEAEASLPAVAAXXXXXXXXXXXXXXXXDPPILWEDDDRLAPYTVVEHEGAIYKYYVIVEHPTDNTKLLAFCKLLPIKLDSRKRDI 191          
BLAST of jgi.p|Trimin1|337158 vs. uniprot
Match: A0A835YRN8_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRN8_9STRA)

HSP 1 Score: 130 bits (326), Expect = 2.580e-34
Identity = 84/98 (85.71%), Postives = 84/98 (85.71%), Query Frame = 0
Query:    1 MEAAAAAVDSVVDAAADLIVIDEAEASLPAVAAXXXXXXXXXXXXXXXXXPPILWEDDDRLAPYTVVEREGAIYKYYVIVEHPTDNTKLLAF-CKLLP 97
            MEAAAAAVDS  DAAADLIVI E EASLPAVAA     XXXXXXXXXX  PPILWEDDDRLAPYTVVEREGAIYKYYVIVEHPTDNTKLLAF C  LP
Sbjct:   87 MEAAAAAVDSAADAAADLIVIGETEASLPAVAAAAAGPXXXXXXXXXXSDPPILWEDDDRLAPYTVVEREGAIYKYYVIVEHPTDNTKLLAFWCFSLP 184          
BLAST of jgi.p|Trimin1|337158 vs. uniprot
Match: A0A835YIU5_9STRA (DUF1995 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIU5_9STRA)

HSP 1 Score: 133 bits (334), Expect = 1.760e-32
Identity = 92/105 (87.62%), Postives = 92/105 (87.62%), Query Frame = 0
Query:    3 AAAAAVDSVVDAAADLIVIDEAEASLPAVAAXXXXXXXXXXXXXXXXXPPILWEDDDRLAPYTVVEREGAIYKYYVIVEHPTDNTKLLAFCKLLPIKLDSRKRDI 107
            AAAAAVD        LIVIDE EASLPAV  XXXXXXXXXXXXXXXXX  ILWEDDDRLAPYTVVEREGAIYKYYVIVEHPTDNTKLLAFCKLLPIKLDSRKRDI
Sbjct:  364 AAAAAVDXXXXXXXXLIVIDETEASLPAVXXXXXXXXXXXXXXXXXXXXXILWEDDDRLAPYTVVEREGAIYKYYVIVEHPTDNTKLLAFCKLLPIKLDSRKRDI 468          
BLAST of jgi.p|Trimin1|337158 vs. uniprot
Match: A0A835ZB70_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB70_9STRA)

HSP 1 Score: 115 bits (289), Expect = 2.190e-29
Identity = 76/90 (84.44%), Postives = 80/90 (88.89%), Query Frame = 0
Query:   18 LIVIDEAEASLPAVAAXXXXXXXXXXXXXXXXXPPILWEDDDRLAPYTVVEREGAIYKYYVIVEHPTDNTKLLAFCKLLPIKLDSRKRDI 107
            LIVIDEAE++L     XXXXXXXXXXXXXX    PILWEDD+RLAPYTVVEREGAIYKYYVIVEHPTDNTKLLAFCKLLPIKLDSR RD+
Sbjct:   29 LIVIDEAESALXXXXXXXXXXXXXXXXXXXDL--PILWEDDNRLAPYTVVEREGAIYKYYVIVEHPTDNTKLLAFCKLLPIKLDSRMRDV 116          
BLAST of jgi.p|Trimin1|337158 vs. uniprot
Match: A0A836CLN8_9STRA (Ribonuclease H-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLN8_9STRA)

HSP 1 Score: 118 bits (295), Expect = 2.920e-27
Identity = 56/103 (54.37%), Postives = 78/103 (75.73%), Query Frame = 0
Query:  105 RDIATTGTTEVKEYNFGKKLPFLHLTSDFWTAKHQNKAYGTVVVAFVNNQWELCIRTLGTCYMGGTKTADRLARWVAFVLRKATGLKMDSVVSCTSDGASDMK 207
            RD+    T EV   + G++LPF+HLT+D WTAK+Q+KAYGT +V+FV+  W+L IRTLGT  + G KT+  +  WV F+L+KATGL  D++++CTSDGASDM+
Sbjct:  178 RDLVA-ATKEVSHVH-GQQLPFIHLTTDIWTAKYQSKAYGTALVSFVDANWKLNIRTLGTAAISGAKTSVNIQAWVGFLLQKATGLGFDALLTCTSDGASDMR 278          
BLAST of jgi.p|Trimin1|337158 vs. uniprot
Match: A0A836CDG4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDG4_9STRA)

HSP 1 Score: 110 bits (275), Expect = 1.210e-25
Identity = 80/92 (86.96%), Postives = 80/92 (86.96%), Query Frame = 0
Query:    1 MEAAAAAVDSVVDAAADLIVIDEAEASLPAVAAXXXXXXXXXXXXXXXXXPPILWEDDDRLAPYTVVEREGAIYKYYVIVEHPTDNTKLLAF 92
            MEAAAAAVDS       LIVIDE EASLPAV  XXXXXXXXXXXXXXXXX  ILWEDDDRLAPYTVVEREGAIYKYYVIVEHPTDNTKLLAF
Sbjct:    1 MEAAAAAVDSAAXXXXXLIVIDETEASLPAVXXXXXXXXXXXXXXXXXXXXXILWEDDDRLAPYTVVEREGAIYKYYVIVEHPTDNTKLLAF 92          
BLAST of jgi.p|Trimin1|337158 vs. uniprot
Match: A0A836CN58_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN58_9STRA)

HSP 1 Score: 104 bits (259), Expect = 3.060e-22
Identity = 80/98 (81.63%), Postives = 80/98 (81.63%), Query Frame = 0
Query:    1 MEAAAAAVDSVVDAAADLIVIDEAEASLPAVAAXXXXXXXXXXXXXXXXXPPILWEDDDRLAPYTVVEREGAIYKYYVIVEHPTDNTKLLAF-CKLLP 97
            MEAAAA           LIVIDE EASLPAVA XXXXXXXXXXXXXXXXX  ILWEDDDRLAPYTVVEREGAIYKYYVIVEHPTDNTKLLAF C  LP
Sbjct: 1966 MEAAAAXXXXXXXXXXXLIVIDETEASLPAVAXXXXXXXXXXXXXXXXXXXXILWEDDDRLAPYTVVEREGAIYKYYVIVEHPTDNTKLLAFWCFSLP 2063          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|337158 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A836C924_9STRA1.450e-129100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z2V7_9STRA9.020e-6745.92Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CBV0_9STRA4.630e-5458.60Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZCQ4_9STRA2.180e-3797.78Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YRN8_9STRA2.580e-3485.71Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A835YIU5_9STRA1.760e-3287.62DUF1995 domain-containing protein n=1 Tax=Tribonem... [more]
A0A835ZB70_9STRA2.190e-2984.44Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CLN8_9STRA2.920e-2754.37Ribonuclease H-like domain-containing protein n=1 ... [more]
A0A836CDG4_9STRA1.210e-2586.96Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CN58_9STRA3.060e-2281.63Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 125..206

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_87contigContig_87:429038..430253 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|337158mRNA_14773Tribonema minus UTEX_B_3156 mRNAContig_87 429038..430253 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|337158|MIX45921_3_23 ID=Trimin1|337158|MIX45921_3_23|Name=jgi.p|Trimin1|337158|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=208bp
MEAAAAAVDSVVDAAADLIVIDEAEASLPAVAAAAAGPEAALPAAAAGSD
PPILWEDDDRLAPYTVVEREGAIYKYYVIVEHPTDNTKLLAFCKLLPIKL
DSRKRDIATTGTTEVKEYNFGKKLPFLHLTSDFWTAKHQNKAYGTVVVAF
VNNQWELCIRTLGTCYMGGTKTADRLARWVAFVLRKATGLKMDSVVSCTS
DGASDMK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf