Trimin1|336986|MIX45749_2_19 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|336986
Unique Name	Trimin1\|336986\|MIX45749_2_19
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	485

Homology

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BLAST of jgi.p|Trimin1|336986 vs. uniprot
Match: A0A835YRP9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRP9_9STRA)

HSP 1 Score: 592 bits (1525), Expect = 1.840e-207
Identity = 484/484 (100.00%), Postives = 484/484 (100.00%), Query Frame = 0

Query:    1 MRDQLAELKAGGLGGCQLVCRALQRHMKSSRVQAWGLSAVMALALSQQNAVRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAYLITECKDNHNALRAXXXXXXXXXXXXXXXRDNVVQSNALFAASRLAADPDDSAQLGNDGVCEHALRAMTAAAPPASAALLPYPVPFSALMAVANLAELAANGARISGAGGCAALLAAVRACPRDAAVQRWAWLGISRLAKDPETAMRLGDAGAWLLAVTAYRTARDNAAAXXXXXXXXXXXXXXXXXXAPDNIPVQDASALPVLRGAIYCLAQHPANRAMLPAGGVELLTEALLAHADAERNAQQQTLEDXXXXXXXXXXXXXXXXXXXXXXRQQRATDAANAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARAAAQRTLAKLQAKLKRVREVLGSDDAGSAAPQQRSAHVAAAAATGDENGHKQKKQRAG 484
            MRDQLAELKAGGLGGCQLVCRALQRHMKSSRVQAWGLSAVMALALSQQNAVRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAYLITECKDNHNALRAXXXXXXXXXXXXXXXRDNVVQSNALFAASRLAADPDDSAQLGNDGVCEHALRAMTAAAPPASAALLPYPVPFSALMAVANLAELAANGARISGAGGCAALLAAVRACPRDAAVQRWAWLGISRLAKDPETAMRLGDAGAWLLAVTAYRTARDNAAAXXXXXXXXXXXXXXXXXXAPDNIPVQDASALPVLRGAIYCLAQHPANRAMLPAGGVELLTEALLAHADAERNAQQQTLEDXXXXXXXXXXXXXXXXXXXXXXRQQRATDAANAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARAAAQRTLAKLQAKLKRVREVLGSDDAGSAAPQQRSAHVAAAAATGDENGHKQKKQRAG
Sbjct:    1 MRDQLAELKAGGLGGCQLVCRALQRHMKSSRVQAWGLSAVMALALSQQNAVRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAYLITECKDNHNALRAXXXXXXXXXXXXXXXRDNVVQSNALFAASRLAADPDDSAQLGNDGVCEHALRAMTAAAPPASAALLPYPVPFSALMAVANLAELAANGARISGAGGCAALLAAVRACPRDAAVQRWAWLGISRLAKDPETAMRLGDAGAWLLAVTAYRTARDNAAAXXXXXXXXXXXXXXXXXXAPDNIPVQDASALPVLRGAIYCLAQHPANRAMLPAGGVELLTEALLAHADAERNAQQQTLEDXXXXXXXXXXXXXXXXXXXXXXRQQRATDAANAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARAAAQRTLAKLQAKLKRVREVLGSDDAGSAAPQQRSAHVAAAAATGDENGHKQKKQRAG 484

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BLAST of jgi.p|Trimin1|336986 vs. uniprot
Match: A0A836CAT7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAT7_9STRA)

HSP 1 Score: 186 bits (471), Expect = 9.130e-48
Identity = 149/334 (44.61%), Postives = 177/334 (52.99%), Query Frame = 0

Query:    1 MRDQLAELKAGGLGGCQLVCRALQRHMKSSRVQAWGLSAVMALALSQQNAVRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAYLITECKDNHNALRAXXXXXXXXXXXXXXXRDNVVQSNALFAASRLAADPDDSAQLGNDGVCEHALRAMTAAAPPASAALLPYPVPFSALMAVANLAELAANGARISGAGGCAALLAAVRACPRDAAVQRWAWLGISRLAKDPETAMRLGDAGAWLLAVTAYRTARDNAAAXXXXXXXXXXXXXXXXXXAPDNIPVQDASALPVLRGAIYCLAQHPANRAML---PAGGVELLTEALLAHADAERNAQQQ 331
            M++QLAEL AGGL GC+L+C+A+Q H +++  Q+WGL A+ A+A  QQ+A+RL                             +  L+T+C +NH     XXXXXXXXXXXXXXX        AL  A+RLA DPDDSAQLG  GVC HA+  +TAAA    AA            A  NL+ LAAN ARI  AGGCAAL+ AVR  P DA VQ WAWL                      LA  AYR ARD AAA                  A    P +DA+ L  L+ A++ LAQH ANRA L   PAG  ELL EALLAHA AER   QQ
Sbjct:  121 MKNQLAELNAGGLDGCRLMCQAMQLHPQANLTQSWGLFAITAMAQCQQDALRLGRAGACVVTVQALRSHTQGADLQAHGCAAVVNLVTDCAENHGXXXXXXXXXXXXXXXXXXXXXXXXXXXALGTAARLAIDPDDSAQLGAAGVCAHAVAVLTAAATAPDAAXXXXXXXXXXXXA--NLSALAANRARIGDAGGCAALVGAVRDRPHDAHVQEWAWLAXXXXXXXXXXXXXXXXXXXXPLAAAAYRRARDAAAAAA----------------AAGEAP-RDANTLLALQAAVFHLAQHAANRARLVMPPAGDAELLAEALLAHARAEREEAQQ 435

[Close]

BLAST of jgi.p|Trimin1|336986 vs. uniprot
Match: A0A836C902_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C902_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 6.450e-7
Identity = 90/254 (35.43%), Postives = 106/254 (41.73%), Query Frame = 0

Query:   83 IAYLITECKDNHN-ALRAXXXXXXXXXXXXXXXRDNVVQSNALFAASRLAADPDDSAQLGNDGVCEHALRAMTAAAPPASAALLPYPVPFSALMAVANLAELAANGARISGAGGCAALLAAVR-ACPRDAAVQRWAWLGISRLAKDPETAMRLGDAGAWLLAVTAYRTARDNAAAXXXXXXXXXXXXXXXXXXAPDNIPVQDASALPVLRGAIYCLAQHPANRAML---PAGGVELLTEALLAHADAERNAQQQ 331
            +A L+T+ +++H  AL A                D+ VQ+NAL AA++LA DP DS +LG  GVCE AL A                                           CAALL  +R    R A  +                           +A+ AYR ARD AA XXXXXXXX            D    QD SAL VLR  I  LA HPAN A L   PAG VELL EALLAH    R+A QQ
Sbjct:   28 LANLVTDGEESHGVALSAADACALVTPALETRPDDHDVQANALEAAAQLALDPADSTRLGAAGVCERALAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-CAALLLVLRNTTARGAKARXXXXXXXXXXXXXXXXXXXXXXXXXXXVAMAAYRDARDAAAXXXXXXXXX------------DMDTSQDTSALLVLRAVIAGLAAHPANAARLAMPPAGDVELLAEALLAHG---RDAAQQ 265

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|336986 vs. uniprot

BLAST of jgi.p|Trimin1|336986 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A835YRP9_9STRA	1.840e-207	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CAT7_9STRA	9.130e-48	44.61	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836C902_9STRA	6.450e-7	35.43	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 362..391
None	No IPR available	COILS	Coil	Coil	coord: 419..446
None	No IPR available	COILS	Coil	Coil	coord: 319..360
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 326..377
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 446..484
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 353..367
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 3..262 e-value: 4.3E-18 score: 67.2
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 17..319

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_86	contig	Contig_86:248851..250656 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|336986	mRNA_13684	Tribonema minus UTEX_B_3156	mRNA	Contig_86 248851..250656 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|336986|MIX45749_2_19 ID=Trimin1|336986|MIX45749_2_19|Name=jgi.p|Trimin1|336986|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=485bp
MRDQLAELKAGGLGGCQLVCRALQRHMKSSRVQAWGLSAVMALALSQQNA
VRLGRAGACARAVEALRRHAQCASVQAWACAAIAYLITECKDNHNALRAA
GACALVAAALTTHTRDNVVQSNALFAASRLAADPDDSAQLGNDGVCEHAL
RAMTAAAPPASAALLPYPVPFSALMAVANLAELAANGARISGAGGCAALL
AAVRACPRDAAVQRWAWLGISRLAKDPETAMRLGDAGAWLLAVTAYRTAR
DNAAAATAAPAAAAAAAVAAAAAAPDNIPVQDASALPVLRGAIYCLAQHP
ANRAMLPAGGVELLTEALLAHADAERNAQQQTLEDAQRQLAQERERSAAA
QLALETERQQRATDAANAAAAQQEEAAREEARRAAAAAQAAALAAAQAAA
LAAARQKVVQEREEAAAQLLQSNNARAAAQRTLAKLQAKLKRVREVLGSD
DAGSAAPQQRSAHVAAAAATGDENGHKQKKQRAG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011989	ARM-like
IPR016024	ARM-type_fold