Trimin1|336844|MIX45607_2_12 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|336844
Unique NameTrimin1|336844|MIX45607_2_12
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length337
Homology
BLAST of jgi.p|Trimin1|336844 vs. uniprot
Match: A0A835YLX7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLX7_9STRA)

HSP 1 Score: 653 bits (1685), Expect = 1.120e-236
Identity = 336/336 (100.00%), Postives = 336/336 (100.00%), Query Frame = 0
Query:    1 MAVSVERLRSVLAGWRDCCCRRGAGGGLARRQEGDATLLLGLRFSRAWPLENATATGARRVGGTFPSAMVKPQNAAAAKAVATPKPKPAAXXXSSEXXXXXXXXXXXXXXXPAGETDRDLRGCPLTYDGVPCTGHIVAVTDGAGCSNFRRRDGEKCFYYEKTASKESDCEMCGTKKIKLGQSSFGIPPEDAAFVPHADPVSRTWVTGWVNAHTNFNDCVGLRIPADAGDGKMVSAYSCALEETTTCGCCDQDIEANEPHFKAGTLDVHFHRTCARVAFNDWTSQFVHKRLVSKHDEHVTNLTKGDRSAAAAAASVHVTAKPPKKVKLAVMDLTNDD 336
            MAVSVERLRSVLAGWRDCCCRRGAGGGLARRQEGDATLLLGLRFSRAWPLENATATGARRVGGTFPSAMVKPQNAAAAKAVATPKPKPAAXXXSSEXXXXXXXXXXXXXXXPAGETDRDLRGCPLTYDGVPCTGHIVAVTDGAGCSNFRRRDGEKCFYYEKTASKESDCEMCGTKKIKLGQSSFGIPPEDAAFVPHADPVSRTWVTGWVNAHTNFNDCVGLRIPADAGDGKMVSAYSCALEETTTCGCCDQDIEANEPHFKAGTLDVHFHRTCARVAFNDWTSQFVHKRLVSKHDEHVTNLTKGDRSAAAAAASVHVTAKPPKKVKLAVMDLTNDD
Sbjct:    1 MAVSVERLRSVLAGWRDCCCRRGAGGGLARRQEGDATLLLGLRFSRAWPLENATATGARRVGGTFPSAMVKPQNAAAAKAVATPKPKPAAXXXSSEXXXXXXXXXXXXXXXPAGETDRDLRGCPLTYDGVPCTGHIVAVTDGAGCSNFRRRDGEKCFYYEKTASKESDCEMCGTKKIKLGQSSFGIPPEDAAFVPHADPVSRTWVTGWVNAHTNFNDCVGLRIPADAGDGKMVSAYSCALEETTTCGCCDQDIEANEPHFKAGTLDVHFHRTCARVAFNDWTSQFVHKRLVSKHDEHVTNLTKGDRSAAAAAASVHVTAKPPKKVKLAVMDLTNDD 336          
BLAST of jgi.p|Trimin1|336844 vs. uniprot
Match: A0A835YXG2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXG2_9STRA)

HSP 1 Score: 169 bits (429), Expect = 7.880e-47
Identity = 106/129 (82.17%), Postives = 109/129 (84.50%), Query Frame = 0
Query:   69 MVKPQNAAAAKAVATPKPKPAAXXXSSEXXXXXXXXXXXXXXXPA-------------GETDRDLRGCPLTYDGVPCTGHIVAVTDGAGCSNFRRRDGEKCFYYEKTASKESDCEMCGTKKIKLGQSSF 184
            MVKPQNAAAAKAVATPKPKPAAXXXSSEXXXXXXXXXXXXXXX               GETDRDLRGCPLTYDGVPCTGHIVAVTDGAGCSNFRRRDGEKCFYYEKTASKESDCEMCGTKK    + ++
Sbjct:    1 MVKPQNAAAAKAVATPKPKPAAXXXSSEXXXXXXXXXXXXXXXXXVRNPFGRAKALAKGETDRDLRGCPLTYDGVPCTGHIVAVTDGAGCSNFRRRDGEKCFYYEKTASKESDCEMCGTKKAVCARCAY 129          
BLAST of jgi.p|Trimin1|336844 vs. uniprot
Match: A0A835YPM4_9STRA (Concanavalin A-like lectin/glucanase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPM4_9STRA)

HSP 1 Score: 108 bits (270), Expect = 4.550e-23
Identity = 54/65 (83.08%), Postives = 55/65 (84.62%), Query Frame = 0
Query:    1 MAVSVERLRSVLAGWRDCCCRRGAGGGLARRQEGDATLLLGLRFSRAWPLENATATGARRVGGTF 65
            MAVS+ERLRSVLAGWR CCCR GAGGGLARRQEGDA LLLGLRFSR W LENATA  A RVG  F
Sbjct:    1 MAVSIERLRSVLAGWRGCCCRDGAGGGLARRQEGDAALLLGLRFSRTWLLENATAVWAGRVGRAF 65          
BLAST of jgi.p|Trimin1|336844 vs. uniprot
Match: A0A836CFF9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFF9_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 1.870e-14
Identity = 37/60 (61.67%), Postives = 46/60 (76.67%), Query Frame = 0
Query:  170 EMCGTKKIKLGQSSFGIPPEDAAFVPHADPVSRTWVTGWVNAHTNFNDCVGLRIPADAGD 229
            E+C   +IKLGQSSFGIPP+D+AF  H DP+++  VTGW N H NF+ C+ LRIPA AGD
Sbjct:  316 EIC---QIKLGQSSFGIPPKDSAFQAHVDPLTKKSVTGWANVHANFHGCLELRIPAGAGD 372          
BLAST of jgi.p|Trimin1|336844 vs. uniprot
Match: A0A835YXY8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXY8_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 2.310e-11
Identity = 30/42 (71.43%), Postives = 32/42 (76.19%), Query Frame = 0
Query:  205 VTGWVNAHTNFNDCVGLRIPADAGDGKMVSAYSCALEETTTC 246
            +TGW N HTN  DC GL IP D GDGKMV AYSCA+EETT C
Sbjct:  309 ITGWANTHTNHYDCAGLHIPGDGGDGKMVFAYSCAMEETTAC 350          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|336844 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A835YLX7_9STRA1.120e-236100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YXG2_9STRA7.880e-4782.17Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YPM4_9STRA4.550e-2383.08Concanavalin A-like lectin/glucanase domain-contai... [more]
A0A836CFF9_9STRA1.870e-1461.67Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835YXY8_9STRA2.310e-1171.43Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 79..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_85contigContig_85:383046..385045 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|336844mRNA_12201Tribonema minus UTEX_B_3156 mRNAContig_85 383046..385045 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|336844|MIX45607_2_12 ID=Trimin1|336844|MIX45607_2_12|Name=jgi.p|Trimin1|336844|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=337bp
MAVSVERLRSVLAGWRDCCCRRGAGGGLARRQEGDATLLLGLRFSRAWPL
ENATATGARRVGGTFPSAMVKPQNAAAAKAVATPKPKPAAAAASSEPKPA
AAAAAPEHKPAPAGETDRDLRGCPLTYDGVPCTGHIVAVTDGAGCSNFRR
RDGEKCFYYEKTASKESDCEMCGTKKIKLGQSSFGIPPEDAAFVPHADPV
SRTWVTGWVNAHTNFNDCVGLRIPADAGDGKMVSAYSCALEETTTCGCCD
QDIEANEPHFKAGTLDVHFHRTCARVAFNDWTSQFVHKRLVSKHDEHVTN
LTKGDRSAAAAAASVHVTAKPPKKVKLAVMDLTNDD*
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