Trimin1|336767|MIX45530_6_19 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|336767
Unique NameTrimin1|336767|MIX45530_6_19
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length516
Homology
BLAST of jgi.p|Trimin1|336767 vs. uniprot
Match: A0A835YRT0_9STRA (PPR_long domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRT0_9STRA)

HSP 1 Score: 780 bits (2015), Expect = 5.900e-281
Identity = 515/515 (100.00%), Postives = 515/515 (100.00%), Query Frame = 0
Query:    1 MLAQLLAPARFARCLGSSVPYRGPQSAWAFLRQFSGGHSEGQPSQQQLRQTGSTHQAHRQQRQNGIAKASPSRLQHGPLRRGKERPRSPLVEGIRSLSDQGRWGDVARTLNDAKAPTDSELRAVLKTVAYKYQPSLATTALKRLQGMVALTAQDFERTIMAHMNHPSGALKLLNEMEKAKDSKHAGDSRGGSERALEWLQLMEDTGHMPEGKHFTAAMGVCTAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYATAMEPEKAEAVLAEICQSATVRPNVFTFNSIVKAYNEVQRLDDAEQVISRMRAAGVQPGLQTWNGIIHAADAAGDVKRADRLYSDALLSGTIKPYRPWHSASIMKQVSGTIPPKGTLMDLHLLNPGTGRAAIRHELHERQKDARRRKLPLYIIAGHGGGLLVAAVSDTLKSQGILFVLQPGVVYRFFS 515
            MLAQLLAPARFARCLGSSVPYRGPQSAWAFLRQFSGGHSEGQPSQQQLRQTGSTHQAHRQQRQNGIAKASPSRLQHGPLRRGKERPRSPLVEGIRSLSDQGRWGDVARTLNDAKAPTDSELRAVLKTVAYKYQPSLATTALKRLQGMVALTAQDFERTIMAHMNHPSGALKLLNEMEKAKDSKHAGDSRGGSERALEWLQLMEDTGHMPEGKHFTAAMGVCTAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYATAMEPEKAEAVLAEICQSATVRPNVFTFNSIVKAYNEVQRLDDAEQVISRMRAAGVQPGLQTWNGIIHAADAAGDVKRADRLYSDALLSGTIKPYRPWHSASIMKQVSGTIPPKGTLMDLHLLNPGTGRAAIRHELHERQKDARRRKLPLYIIAGHGGGLLVAAVSDTLKSQGILFVLQPGVVYRFFS
Sbjct:    1 MLAQLLAPARFARCLGSSVPYRGPQSAWAFLRQFSGGHSEGQPSQQQLRQTGSTHQAHRQQRQNGIAKASPSRLQHGPLRRGKERPRSPLVEGIRSLSDQGRWGDVARTLNDAKAPTDSELRAVLKTVAYKYQPSLATTALKRLQGMVALTAQDFERTIMAHMNHPSGALKLLNEMEKAKDSKHAGDSRGGSERALEWLQLMEDTGHMPEGKHFTAAMGVCTAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYATAMEPEKAEAVLAEICQSATVRPNVFTFNSIVKAYNEVQRLDDAEQVISRMRAAGVQPGLQTWNGIIHAADAAGDVKRADRLYSDALLSGTIKPYRPWHSASIMKQVSGTIPPKGTLMDLHLLNPGTGRAAIRHELHERQKDARRRKLPLYIIAGHGGGLLVAAVSDTLKSQGILFVLQPGVVYRFFS 515          
BLAST of jgi.p|Trimin1|336767 vs. uniprot
Match: A0A836CK07_9STRA (PPR_long domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK07_9STRA)

HSP 1 Score: 269 bits (688), Expect = 6.440e-78
Identity = 240/468 (51.28%), Postives = 274/468 (58.55%), Query Frame = 0
Query:  102 RWGDVARTLNDAKAPTDSELRAVLKTVAYKYQPSLATTALKRLQGMVALTAQDFERTIMAHMNH-PSGALKLLNEMEK----------------------------------------------------AKDSKH-----AGDSRGGSERALEWLQLMEDTGHMPEGKHFTAAMGVCTAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYATAMEPEKAEAVLAEICQSATVRPNVFTFNSIVKAYNEVQRLDDAEQVISRMRAAGVQPGLQTWNGIIHAADAAGDVKRADRLYSDALLSGTIKPYRPWHSASIMKQVSGTIPPKGTLMDLHLLNPGTGRAAIRHELHERQKDARRRKLPLYIIAGHGGGLLVAAVSDTLKSQGILFVL---QPG 508
            RW D     N    PT  E+RA+LK +A  +QP  A  AL+RLQ +    + D+E  I A+ N  P  A++LL EM++                                                     +D +      AGDSRGGS+ A++ LQLM DT   P+ K+F AA+ VC  E                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                           YAT  EPEKAEAV AE+CQ+A V+PN FTF S++KAY EVQRLD AEQVISRMR+AGVQP L TW  IIHAAD AGD+KRAD+LY DALLSG IKPYRPW S   MK  SG I P GT+MDLH +N GTGRAAIRHEL  RQ  A +R  PLYII G G GLL AAV DTL +QGI  +L    PG
Sbjct:  311 RWQDALHIFNAISEPTALEVRALLKAMACSHQPQHAMIALRRLQ-VSGANSHDYELAIQAYENQLPFKAMELLREMKREGFGWTHRACSAVLLAFGKAGRLNAAVQLIKAMQEVGISPDKVDFLMLTTNCVRDERSEVVTPAGDSRGGSKMAIKLLQLMRDTRVAPDVKNFNAALKVCARERNPVNASIIFQQMATQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVQDIWKEMHRLQLEPDVRSYTSRINFYATTKEPEKAEAVFAEMCQAANVKPNAFTFTSLMKAYIEVQRLDAAEQVISRMRSAGVQPSLPTWKSIIHAADTAGDLKRADQLYEDALLSGAIKPYRPWRSVK-MKDASGNIQPNGTVMDLHKVNRGTGRAAIRHELRLRQSSASKRTNPLYIITGQGDGLLKAAVCDTLNAQGIHHLLPAAHPG 776          
BLAST of jgi.p|Trimin1|336767 vs. uniprot
Match: A0A836CIT2_9STRA (PPR_long domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIT2_9STRA)

HSP 1 Score: 258 bits (660), Expect = 9.290e-78
Identity = 249/341 (73.02%), Postives = 277/341 (81.23%), Query Frame = 0
Query:  170 LKLLNEMEKAKDSKHAGDSRGGSERALEWLQLMEDTGHMPEGKHFTAAMGVCTAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYATAMEPEKAEAVLAEICQSATVRPNVFTFNSIVKAYNEVQRLDDAEQVISRMRAAGVQPGLQTWNGIIHAADAAGDVKRADRLYSDALLSGTIKPYRPWHSASIMKQVSGTIPPKGTLMDLHLLNPGTGRAAIRHELHERQK--DARRRKLPLYIIAGHGGGLLVAAVSDTLKSQGILFVLQPG 508
            L L+    + KDS HAGDSRGGSE+ALEWLQLMED GH+P  +HFTAA+ +C+AEG   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX YA A +P KAE VLA++ +SA V PN  TFNS++KAY EVQRLDDAE VISRMRA GVQP L+ W  IIHAA A GD+KRADRLY+DALLSG + PYRPW +  I +  SG + PKGT+MDLH LNP T  AAIRHEL  RQK   A RRK+PLYII G GGG + A V+D L+S+ I + L  G
Sbjct:   49 LTLIQHCVRNKDSTHAGDSRGGSEQALEWLQLMEDAGHVPNSRHFTAAVVICSAEGNAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCYAMAKDPGKAEKVLADMIKSAAVEPNAITFNSVMKAYIEVQRLDDAEDVISRMRATGVQPDLEIWTSIIHAAGALGDIKRADRLYNDALLSGAVNPYRPWCTKHI-RDASGNMQPKGTVMDLHGLNPTTACAAIRHELRVRQKLEGASRRKVPLYIITGQGGGHMRADVADLLRSKKIHYQLPTG 388          
BLAST of jgi.p|Trimin1|336767 vs. uniprot
Match: A0A836CLV8_9STRA (PPR_long domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLV8_9STRA)

HSP 1 Score: 234 bits (596), Expect = 2.770e-68
Identity = 241/350 (68.86%), Postives = 277/350 (79.14%), Query Frame = 0
Query:  166 PSGA--LKLLNEMEKAKDSKHAGDSRGGSERALEWLQLMEDTGHMPEGKHFTAAMGVCTAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYATAMEPEKAEAVLAEICQSATVRPNVFTFNSIVKAYNEVQRLDDAEQVISRMRAAGVQPGLQTWNGIIHAADAAGDVKRADRLYSDALLSGTIKPYRPWHSASIMKQVSGTIPP--KGTLMDLHLLNPGTGRAAIRHELHERQKDARRRKLPLYIIAGHGGGLLVAAVSDTLKSQGIL-FVLQPGVV 510
            PSGA  L L+      K+   AG+ RGGSE+ALE LQ M+D G +P+ +H+ AAM VC   G       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX YATA +P+KAE VLAE+ QSAT++P   TF S++KAY E++RLDDAE+VISRMRAAGVQP ++TW  IIHAAD  GD+KRAD+L SDALL+  IKPYRPW S    K  SG   P  +GT+MDL  LN GT RA IRHEL ERQ+DA+R K PL+I+ G GGGLL+ AVS TL+SQGI  F+L+PG++
Sbjct:   43 PSGADHLILIVACNCGKNGMRAGN-RGGSEQALELLQRMQDKGPVPDIRHYGAAMTVCATGGDLVNAANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCYATAKQPDKAEEVLAEMVQSATIKPEAITFTSLMKAYIEMERLDDAERVISRMRAAGVQPTIETWKSIIHAADTLGDIKRADQLCSDALLTDGIKPYRPWRSMK-SKDASGNKQPVGEGTVMDLRGLNSGTARAVIRHELRERQEDAKRGKFPLHIMTGQGGGLLLTAVSGTLESQGIQHFLLRPGLL 390          
BLAST of jgi.p|Trimin1|336767 vs. uniprot
Match: A0A835YQD2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQD2_9STRA)

HSP 1 Score: 219 bits (557), Expect = 1.090e-65
Identity = 114/154 (74.03%), Postives = 125/154 (81.17%), Query Frame = 0
Query:  357 SIVKAYNEVQRLDDAEQVISRMRAAGVQPGLQTWNGIIHAADAAGDVKRADRLYSDALLSGTIKPYRPWHSASIMKQVSGTIPPKGTLMDLHLLNPGTGRAAIRHELHERQKDARRRKLPLYIIAGHGGGLLVAAVSDTLKSQGILFVLQPGVV 510
            S++KAY   +RLD AE VISRMRAAGVQP L TW  IIHAAD AGDVKRADRLY+DALLSGTIKPYRPW S S+ +  SG  P KGT+MDLHL   GTGRAAIRHELH+RQKDA R KLPLYII GH GG +VAAVS  LKSQ +LF+LQPGVV
Sbjct:    3 SLMKAYIVAERLDAAEHVISRMRAAGVQPSLPTWKSIIHAADTAGDVKRADRLYNDALLSGTIKPYRPWRS-SVNRDASGNKPAKGTVMDLHL--SGTGRAAIRHELHQRQKDAGRCKLPLYIITGHCGGQMVAAVSGILKSQSVLFLLQPGVV 153          
BLAST of jgi.p|Trimin1|336767 vs. uniprot
Match: A0A836CEZ1_9STRA (PPR_long domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEZ1_9STRA)

HSP 1 Score: 205 bits (522), Expect = 3.330e-56
Identity = 177/531 (33.33%), Postives = 232/531 (43.69%), Query Frame = 0
Query:   15 LGSSVP----YRGPQSAWAFLR-QFSGGHSEGQPSQQQLRQTGSTHQAH-----RQQRQNGIAKASPSRLQHGPLRRGKERPRSPLVEGIRSLSDQGRWGDVARTLNDAKAPTDSELRAVLKTVAYKYQPSLATTALKRLQGMVALTAQDFERTIMAHMNH-PSGALKLLNEMEKAKDSKHAGDSRGGSERALEW-LQLMEDTGHMPEGKHFTAAMGVCTAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYATAMEPEKAEAVLAEICQSATVRPNVFTFNSIV-------------KAYNEVQRLDDAEQVISRMRAAGVQPGLQTWNGIIHAADAAGDVKRADRLYSDALLSGTIKPYRPWHSASIMKQVSGTIPPKGTLMDLHLLNPGTGRAAIRHELHERQKDAR--RRKLPLYIIAGHGGGLLVAAVSDTLKSQGILFVL---QPGVVYRFFS 515
            +GS VP     R   + WAF++  FSG   + +      R++   H+ H     R   ++GI     +R QH    RG + P +     I +L  Q +W D  +     + PT  E RA+L T+AY +QP  A  AL++L+   A+ + D++  I A+    P  AL+LL++ME+        +  G + RA    LQ     G +         M                                                                                                           YATA +P+KAE V+AE+CQSA V+P+     S V             +AY   +RLDDA++VI RMRAAG  P   TW  II AADA GD+K+ DRLY DALLS  I PYRP  S +I K  +G   P GT+MDLH L+  TG+AAIRHEL  R K A   RR  PLYII G GGGLL+AAVSDTLKSQGI  VL   QPG +Y  F 
Sbjct:   15 IGSGVPTQVALRSTLTTWAFVKYSFSG---DARDPGAAGRESPYWHRHHLSVLQRASLEHGIGSNFATRQQH--TSRGGKPPSTTPACRIHTLGRQKKWNDALQIFKSIEEPTALEARALLATMAYNHQPRHAMFALRQLRNTGAVASHDYQLIIHAYAKELPLEALELLHQMER--------EGFGWTHRACSTVLQAFGKAGRLSAALQLIDVM------------EQRNCNPSDGIKLDVRSWNVLLNAIGRAGQVTEMMAWYREMLKSGGLQPDTVLMTTLLDNAGKAGELGIAEGIWREMRDRQLAPDVKAYNALITCYATARQPDKAEQVIAEMCQSAAVKPDAIALTSCVPLNMLMDVCYNLMQAYINDERLDDADRVIGRMRAAGADPISGTWTTIICAADAVGDIKKVDRLYRDALLSKAINPYRPELSNAI-KDAAGNTLPVGTVMDLHWLDRATGQAAIRHELRVRWKAAGSLRRGKPLYIITGQGGGLLIAAVSDTLKSQGIQHVLPAAQPGRIYCTFQ 519          
BLAST of jgi.p|Trimin1|336767 vs. uniprot
Match: A0A835YW77_9STRA (PPR_long domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW77_9STRA)

HSP 1 Score: 196 bits (497), Expect = 6.210e-54
Identity = 141/373 (37.80%), Postives = 173/373 (46.38%), Query Frame = 0
Query:  142 KRLQGMVALTAQDFERTIMAHMNHPSGA--LKLLNEMEKAKDSKHAGDSRGGSERALEWLQLMEDTGHMPEGKHFTAAMGVCTAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYATAMEPEKAEAVLAEICQSATVRPNVFTFNSIVKAYNEVQRLDDAEQVISRMRAAGVQPGLQTWNGIIHAADAAGDVKRADRLYSDALLSGTIKPYRPWHSASIMK-QVSGTIPPKGTLMDLHLLNPGTGRAAIRHELHERQKDARRRKLPLYIIAGHGGGLLVAAVSDTLKSQGILFVL-QPGVV 510
            +RL   + L  +  +R I      PS A  L L+   ++ K     GD RGGSE+ALE LQ M+D G +P+ +H++AA+ VC  EG                                                                                                    YATA +P+KAE VL E+ QSAT++P+                      VISRMRAAGVQP + TW  IIHAAD  GD+KRAD+L SDALL+  IKPYRPW SA I     S    P+GT+MDL  LN G  RA I HEL ERQ+DA R KLP+YI  G GGGLLVAAVSD LKSQGI  +L +PGV+
Sbjct:   12 RRLNAALQLIDEMQQRNIS-----PSDADYLILIVACDRGKRRTRGGD-RGGSEQALELLQRMQDKGPVPDLRHYSAAITVCVTEGDLANAVNTFQSMRDKGIKPNDWSWAALLDAFGRAGGRNDGMVWGDGYNRRTANCLHHDHSAESCWAAGELSVAEGIWREMRDRQLEPNAYSYNASINC--YATAKQPDKAEGVLTEMVQSATIKPDXXXXXXXXXXXXXXXXXXXXXHVISRMRAAGVQPIIGTWKSIIHAADTLGDIKRADQLCSDALLTDGIKPYRPWRSADINNLNDSSNKQPEGTVMDLRGLNSGIARAVIWHELRERQEDASRSKLPMYITTGQGGGLLVAAVSDALKSQGIQHILLRPGVL 376          
BLAST of jgi.p|Trimin1|336767 vs. uniprot
Match: A0A836CEM5_9STRA (PPR_long domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEM5_9STRA)

HSP 1 Score: 191 bits (485), Expect = 8.860e-52
Identity = 140/383 (36.55%), Postives = 171/383 (44.65%), Query Frame = 0
Query:  162 HMNHPSGA--LKLLNEMEKAKDSKHAGDSRGGSERALEWLQLMEDTGHMPEGKHFTAAMGVCTAE-GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYATAMEPEKAEAVLAEICQSATVRPNVFTFN--------------------------SIVKAYNEVQRLDDAEQVISRMRAAGVQPGLQTWNGIIHAADAAGDVKRADRLYSDALLSGTIKPYRPWHSASIMKQVSGTIPPKGTLMDLHLLNPGTGRAAIRHELHERQKDARRRKL--PLYIIAGHGGGLLVAAVSDTLKSQGI---LFVLQPGVV 510
            H   P G   L L+ +  +   S HAGDSRGGS+RALE LQLM+D G +P  +HFTAA+ VC AE                                                                                                      YATA +P+K E VLAE  +SA V+P+   F                           S+++AY   +RLD+AE+VI RMRAAGV+P L TW  IIHA D  GD+K+ D LY DAL S  I PYRP  S SI K  +G   P G++MDLH LN  T +AAIRHEL  R+K A   +   PLYII G GGG L+AA SDTLKSQ I   L   QPG++
Sbjct:   39 HRVSPDGRTYLTLIQQCVRNSASTHAGDSRGGSKRALELLQLMKDAGPVPNIRHFTAAIMVCVAERNGISAITIFRMMQHEGIRPDLQSWGALLHAIGRAGQLAEMMACYREMCATGGVQPNLVIMTTLLDNAGKAGEVSIAEGIWSEMRDRQLAPDVKTYNALITCYATAKQPDKVEGVLAERIRSAAVKPDAIMFTRACADFRTVLSTMRPALLLVRPPCMVSLMQAYINNKRLDEAERVIGRMRAAGVEPILGTWRSIIHAGDELGDIKKVDLLYCDALSSKAISPYRPERSRSI-KDSAGNTMPLGSVMDLHGLNGATSQAAIRHELRVRRKAAGSLRCGKPLYIITGRGGGFLIAAASDTLKSQVIKHDLHAAQPGII 420          
BLAST of jgi.p|Trimin1|336767 vs. uniprot
Match: A0A835YWM4_9STRA (Smr domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWM4_9STRA)

HSP 1 Score: 190 bits (482), Expect = 7.640e-51
Identity = 157/484 (32.44%), Postives = 199/484 (41.12%), Query Frame = 0
Query:  128 VAYKYQPSLATTALKRLQGMVALTAQDFERTIMAHMNH-PSGALKLLNEMEK----------------------------------------------------------AKDSKHAGDSRGGSERALEWLQLMEDTGHMPEGKHFTAAMGVCTAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYATAMEPEKAEAVLAEICQSATVRPNVFTFNS---------------------------------IVKAYNEVQRLDDAEQVISRMRAAGVQPGLQTWNGIIHAADAAGDVKRADRLYSDALLSGTIKPYRPWHSASIMKQVSGTIPPKGTLMDLHLLNPGTGRAAIRHELHERQKDAR--RRKLPLYIIAGHGGGLLVAAVSDTLKSQGILFV---LQPGVVYRFF 514
            +AY +QP  A TAL++LQG  A+   D++  I A+    P  AL+LL+E E+                                                            +   AGD RGGSE+ LE L+ M+D G +P+ +H++AAM VC  EG                                                                                                    Y TA +P+KAE VLAE+ QSA V+P+   F S                                 +++AY   +RLDDAE VISRMRAAG +P L TW  +I AADA G++K+AD LY DAL S  I P RP  S SI      T+P  GT++DLH LN  TG+AA+RHEL  RQK A   RR  PLYII G G GLL+AAVSDTLKSQGI  V    QPG++Y  F
Sbjct:    1 MAYNHQPQHAMTALRQLQGSGAVAFHDYQLAIHAYAKELPFEALELLHETEREGLAWTHRACSTTLQAFGKAGRLNAALQLIGEMEQRGISPDHIDYLTLTGACARGNTRGNNVIRAGD-RGGSEQVLEILRRMQDKGPVPDIRHYSAAMKVCMTEGNSAKAVNIFRSMRDQHVMRGVLQWVMSVLIDAPFCIVLQGIKPDVRSWNVLLNAIGRTGQVAAGELGIAEGIWSEMLEHQLAPDVKTYNALIMC------YTTAKQPDKAEEVLAEMIQSAAVKPDAIMFTSAIGTLIRACADFRTVLSTMRPALLLVHPPRMISVMQAYINAERLDDAEGVISRMRAAGAEPILSTWTALIIAADAVGNIKKADLLYCDALSSKAINPCRPERSHSIRDSAGNTLP-VGTVIDLHRLNRATGQAAVRHELRVRQKAAGSLRRGKPLYIITGQGEGLLLAAVSDTLKSQGIRHVSHAAQPGIIYCTF 476          
BLAST of jgi.p|Trimin1|336767 vs. uniprot
Match: A0A835Z0J2_9STRA (PPR_long domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0J2_9STRA)

HSP 1 Score: 190 bits (483), Expect = 8.840e-51
Identity = 153/445 (34.38%), Postives = 195/445 (43.82%), Query Frame = 0
Query:   88 SPLVEGIRSLSDQGRWGDVARTLNDAKA----PTDSELRAVLKTVAYKYQPSLATTALKRLQGMVALTAQDFERTIMAH--MNHPSGALKLLNEMEKA------KDSKHAGDSRGGSER---ALEWLQLMEDTGHMPEGKHFTAAMGVCTAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYATAMEPEKAEAVLAEICQSATVRPNVFTFNSIVKAYNEVQRLDDAEQVISRMRAAGVQPGLQTWNGIIHAADAAGDVKRADRLYSDALLSGTIKPYRPWHSA---SIMKQVSGTIPPKGTLMDLHLLNPGTGRAAIRHELHERQKDARRRKLPLYIIAGHGGGLLVAAVSDTLKSQGILFVL---QPGVVY 511
            SPL   I +L+ +G+W    +   DA+A    PT SE RA+L  +A     + A  A+ RL+GM ALTA D+E  + AH    H SGAL+LL+ M+K       +   HA  + G + R   AL+ L  M + G  P    +   +G C                                                                                                        YATA  P +AE VLAE+ QSA V                  RLD  E +I RMRAAGVQP L TW  IIHAA+A GD+K+AD LY+DAL SGTI PY+P  S    + +K  SG     G +MDLH LNP TGRAA+RHEL  RQ  A RR++PL+II G G G L  AV +TL+SQGI  +     PG +Y
Sbjct:   63 SPLGARIMALNRKGKWEAAVKAFQDAEAKHHKPTVSENRALLFALARNGNTADAWAAVHRLRGMGALTAFDYEYALQAHEKSRHWSGALRLLSHMDKKNIKWTIRACSHALLTLGFAGRMNAALQLLDKMCERGLSPHPDSYLQLIGECRRSSSRQKVRDAGDSRGGSKQAVAMLQHMKQTGTKPDIRHFTAVVDACGKAGDWIDALDVFQQMQLELVPNVRSYNTLINC-----------------------YATAKNPGEAEEVLAEMIQSAAVTXXXXXXXXXXXXXXXXXRLDXXELIIDRMRAAGVQPMLSTWAAIIHAAEAHGDLKKADDLYADALSSGTINPYKPLQSTVTVTDIKLASGKSATMGCIMDLHELNPATGRAAVRHELQLRQVCAARRQIPLHIITGQGDGQLQRAVCETLRSQGIAPLYAKGNPGQIY 484          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|336767 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YRT0_9STRA5.900e-281100.00PPR_long domain-containing protein n=1 Tax=Tribone... [more]
A0A836CK07_9STRA6.440e-7851.28PPR_long domain-containing protein n=1 Tax=Tribone... [more]
A0A836CIT2_9STRA9.290e-7873.02PPR_long domain-containing protein n=1 Tax=Tribone... [more]
A0A836CLV8_9STRA2.770e-6868.86PPR_long domain-containing protein n=1 Tax=Tribone... [more]
A0A835YQD2_9STRA1.090e-6574.03Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CEZ1_9STRA3.330e-5633.33PPR_long domain-containing protein n=1 Tax=Tribone... [more]
A0A835YW77_9STRA6.210e-5437.80PPR_long domain-containing protein n=1 Tax=Tribone... [more]
A0A836CEM5_9STRA8.860e-5236.55PPR_long domain-containing protein n=1 Tax=Tribone... [more]
A0A835YWM4_9STRA7.640e-5132.44Smr domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A835Z0J2_9STRA8.840e-5134.38PPR_long domain-containing protein n=1 Tax=Tribone... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 318..351
e-value: 2.9E-4
score: 18.8
coord: 247..280
e-value: 4.5E-5
score: 21.3
coord: 353..385
e-value: 3.2E-5
score: 21.8
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 343..396
e-value: 8.8E-9
score: 35.3
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 280..314
score: 8.604678
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 351..385
score: 11.8273
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 315..350
score: 8.714292
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 245..279
score: 10.632519
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 296..435
e-value: 1.1E-25
score: 92.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 157..295
e-value: 2.4E-21
score: 77.9
IPR033443Pentacotripeptide-repeat region of PRORPPFAMPF17177PPR_longcoord: 213..340
e-value: 4.0E-12
score: 45.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 37..70
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 33..90
NoneNo IPR availablePANTHERPTHR47932ATPASE EXPRESSION PROTEIN 3coord: 166..292
NoneNo IPR availablePANTHERPTHR47932:SF44ATPASE EXPRESSION PROTEIN 3coord: 166..292
coord: 250..417
NoneNo IPR availablePANTHERPTHR47932ATPASE EXPRESSION PROTEIN 3coord: 250..417

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_85contigContig_85:117675..122369 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|336767mRNA_12165Tribonema minus UTEX_B_3156 mRNAContig_85 117675..122474 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|336767|MIX45530_6_19 ID=Trimin1|336767|MIX45530_6_19|Name=jgi.p|Trimin1|336767|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=516bp
MLAQLLAPARFARCLGSSVPYRGPQSAWAFLRQFSGGHSEGQPSQQQLRQ
TGSTHQAHRQQRQNGIAKASPSRLQHGPLRRGKERPRSPLVEGIRSLSDQ
GRWGDVARTLNDAKAPTDSELRAVLKTVAYKYQPSLATTALKRLQGMVAL
TAQDFERTIMAHMNHPSGALKLLNEMEKAKDSKHAGDSRGGSERALEWLQ
LMEDTGHMPEGKHFTAAMGVCTAEGNSVNALKIFQQMRDQGQRPNIISWN
ALVNAIGSTGQVDQMMAMYREMRASRQQPDNITMNTMLACAGAAGRGSIA
QDIWKEMHTLQLEPDVRSYNALINCYATAMEPEKAEAVLAEICQSATVRP
NVFTFNSIVKAYNEVQRLDDAEQVISRMRAAGVQPGLQTWNGIIHAADAA
GDVKRADRLYSDALLSGTIKPYRPWHSASIMKQVSGTIPPKGTLMDLHLL
NPGTGRAAIRHELHERQKDARRRKLPLYIIAGHGGGLLVAAVSDTLKSQG
ILFVLQPGVVYRFFS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
IPR033443PPR_long