Trimin1|336732|MIX45495_3_12 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|336732
Unique NameTrimin1|336732|MIX45495_3_12
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length585
Homology
BLAST of jgi.p|Trimin1|336732 vs. uniprot
Match: A0A835YK69_9STRA (MYND-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK69_9STRA)

HSP 1 Score: 1061 bits (2744), Expect = 0.000e+0
Identity = 584/584 (100.00%), Postives = 584/584 (100.00%), Query Frame = 0
Query:    1 MPGADPIECLERVELAPDAQLGTVLRATRALAAGEVVLRERPLVVYAGYTDLMRQVKRMPAKQIAELLGLLRDETMRAPLALEEARSVALPAVREAGGGIDMGVATKLVLLGSSHGFSMPDSPARGGKLVYDLSCMPDENQCRRGFMRLAGATALSCAPNCMRSACATLGYTTLIATRAIAAGEAITRSIVRLTDSTQVRRAELLTRQGHACACARCIAPDVGFGLPCFVECCRGTLAPLLPAVAACLNPDGHTYANKGAGEVTAWTWHCTRCALRLPGGAMLARLSPVTPLSQRLDALYAALSLNATQPCYAAPLAALLADTRRQLCATHIIALSALNLLATLYAAAAARFDDVAAARLADDDGRVITSRARVNALAAKTEMDALRVLECTPAGCDRGAECNAKHPIVAEPGIAHAVNAFKSLQYTSAAAXXXXXXXXXXXXXXXXXAAARCPRLVPHLRRYAPVVAGFYGVHSDDAVDMAAALGMHLSRGDSPLCCANCAVAAPRGAAXXXXXXXXXXXXXAELKLCGGCRCVRYCGAACQRAHYARHHKHVCKRLAAVRAGCAAAVEFAARKGARGRGLSG 584
            MPGADPIECLERVELAPDAQLGTVLRATRALAAGEVVLRERPLVVYAGYTDLMRQVKRMPAKQIAELLGLLRDETMRAPLALEEARSVALPAVREAGGGIDMGVATKLVLLGSSHGFSMPDSPARGGKLVYDLSCMPDENQCRRGFMRLAGATALSCAPNCMRSACATLGYTTLIATRAIAAGEAITRSIVRLTDSTQVRRAELLTRQGHACACARCIAPDVGFGLPCFVECCRGTLAPLLPAVAACLNPDGHTYANKGAGEVTAWTWHCTRCALRLPGGAMLARLSPVTPLSQRLDALYAALSLNATQPCYAAPLAALLADTRRQLCATHIIALSALNLLATLYAAAAARFDDVAAARLADDDGRVITSRARVNALAAKTEMDALRVLECTPAGCDRGAECNAKHPIVAEPGIAHAVNAFKSLQYTSAAAXXXXXXXXXXXXXXXXXAAARCPRLVPHLRRYAPVVAGFYGVHSDDAVDMAAALGMHLSRGDSPLCCANCAVAAPRGAAXXXXXXXXXXXXXAELKLCGGCRCVRYCGAACQRAHYARHHKHVCKRLAAVRAGCAAAVEFAARKGARGRGLSG
Sbjct:    1 MPGADPIECLERVELAPDAQLGTVLRATRALAAGEVVLRERPLVVYAGYTDLMRQVKRMPAKQIAELLGLLRDETMRAPLALEEARSVALPAVREAGGGIDMGVATKLVLLGSSHGFSMPDSPARGGKLVYDLSCMPDENQCRRGFMRLAGATALSCAPNCMRSACATLGYTTLIATRAIAAGEAITRSIVRLTDSTQVRRAELLTRQGHACACARCIAPDVGFGLPCFVECCRGTLAPLLPAVAACLNPDGHTYANKGAGEVTAWTWHCTRCALRLPGGAMLARLSPVTPLSQRLDALYAALSLNATQPCYAAPLAALLADTRRQLCATHIIALSALNLLATLYAAAAARFDDVAAARLADDDGRVITSRARVNALAAKTEMDALRVLECTPAGCDRGAECNAKHPIVAEPGIAHAVNAFKSLQYTSAAAXXXXXXXXXXXXXXXXXAAARCPRLVPHLRRYAPVVAGFYGVHSDDAVDMAAALGMHLSRGDSPLCCANCAVAAPRGAAXXXXXXXXXXXXXAELKLCGGCRCVRYCGAACQRAHYARHHKHVCKRLAAVRAGCAAAVEFAARKGARGRGLSG 584          
BLAST of jgi.p|Trimin1|336732 vs. uniprot
Match: A0A835YI78_9STRA (MYND-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YI78_9STRA)

HSP 1 Score: 580 bits (1496), Expect = 1.970e-199
Identity = 359/615 (58.37%), Postives = 417/615 (67.80%), Query Frame = 0
Query:    3 GADPIECLERVELAPDAQLGTVLRATRALAAGEVVLRERPLVVYAGYTDLMRQVKRMPAKQIAELLGLLRDETMRAPLALEEARSVALPAVREAGGGIDMGVATKLVLLGSSHGFSMPDSPARGGKLVYDLSCMPDENQCRRGFMRLAGATALSCAPNCMRSACATLGYTTLIATRAIAAGEAITRSIVRLTDSTQVRRAELLTRQGHACACARCIAPDVGFGLPC---FVECCRGTLAPLLPAVAACLNPDGHTYANKGAGEVTAWTWHCTRCALRLPGGAMLARLSPVTPLSQRLDALYAALSLNATQPCYAAPLAALLADTRRQLCATHIIALSALNLLATLYAAAAARFDDVAAARLADDDGRVITSRARVNALAAKTEMDALRVLECTPAGCDRGAECNAKHPIVAEPGIAHAVNAFKSLQYTSAAAXXXXXXXXXXXXXXXXXA---------------------------------AARCPRLVPHLRRYAPVVAGFYGVHSDDAVDMAAALGMHLSRGDSPLCCANC-AVAAPRGAAXXXXXXXXXXXXXAELKLCGGCRCVRYCGAACQRAHYARHHKHVCKRLAAVR----AGCAAAVEFAARKG 576
            GADPIECLERVELAPDAQLG VL+ATR +AAG++VL E PLV+YA Y DL RQVK MPA++IAELL L  D+   A L+L++AR+VA+ AVREAGGGIDM +AT+ VLLG + G +MP +    G + + LSC+P+E Q RRGF+RLAG TA SCAPNCMRS  AT  Y TL+ATRAIAAGE ITR  V+L D+T+ RR E L R+G+ACACARC APDVGFGLPC     E C GTLAPLL A      P          GE+ AWTW C+RCAL+L G A+L RL+PV   S+RL+AL AA+   A +    APL AL+AD RRQLCATHII  SAL  LATLYA AAA  +D+A  RL+D+DG VITSRARV+ALAAKTEMDALRVLECT AGCDRGAEC+A HP + + G+ +A+NA KSLQ+ S AA            XXXXX                                  AARCPRLVPHLRRY PVVA   G  SD+A +MAAALG+ L  GD+PL CANC AV A RGAA   XX          LK CG C CVRYCGAACQRAHYA HHK VCKR AA+     AG AA V+F+   G
Sbjct:    4 GADPIECLERVELAPDAQLGRVLQATREIAAGDIVLCEGPLVLYASYADLTRQVKMMPAERIAELLDLFVDQNS-ARLSLQQARTVAVGAVREAGGGIDMDIATRFVLLGLAQGLAMPAASVPYGGVAHHLSCLPNEWQERRGFLRLAGWTAPSCAPNCMRSVRATPHYMTLVATRAIAAGETITRETVKLADTTRARREETLLRRGYACACARCGAPDVGFGLPCPASAAERCCGTLAPLLLASLRPSKPGSRACTALHKGELAAWTWQCSRCALQLRGDAVLPRLAPVEVASRRLEALNAAMQSGAIKLSLHAPLTALIADARRQLCATHIIVRSALGSLATLYATAAANCNDMAVTRLSDEDGSVITSRARVHALAAKTEMDALRVLECTVAGCDRGAECDAVHPSMKD-GVPYALNALKSLQHASIAAAAVPPGANAAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARCPRLVPHLRRYVPVVATMLGPQSDEAQEMAAALGV-LPGGDAPLYCANCCAVPAARGAAAAVXXAV------TALKSCGRCHCVRYCGAACQRAHYAGHHKRVCKRFAALAGGGGAGGAAPVDFSGMSG 609          
BLAST of jgi.p|Trimin1|336732 vs. uniprot
Match: A0A835YII0_9STRA (MYND-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YII0_9STRA)

HSP 1 Score: 531 bits (1368), Expect = 3.440e-181
Identity = 340/568 (59.86%), Postives = 379/568 (66.73%), Query Frame = 0
Query:    3 GADPIECLERVELAPDAQLGTVLRATRALAAGEVVLRERPLVVYAGYTDLMRQVKRMPAKQIAELLGLLRDETMRAPLALEEARSVALPAVREAGGGIDMGVATKLVLLGSSHGFSMPDSPARGGKLVYDLSCMPDENQCRRGFMRLAGATALSCAPNCMRSACATLGYTTLIATRAIAAGEAITRSIVRLTDSTQVRRAELLTRQGHACACARCIAPDVGFGLPCFVEC---CRGTLAPLLPAVAA--CLNPDGHTYANKGAGEVTAWTWHCTRCALRLPGGAMLARLSPVTPLSQRLDALYAALSLNATQPCYAAPLAALLADTRRQLCATHIIALSALNLLATLYAAAAARFDDVAAARLADDDGRVITSRARVNALAAKTEMDALRVLECTPAGCDRGAECNAKHPIVAEPGIAHAVNAFKSLQYTSAAAXXXXXXXXXXXXXXXXXA----AARCPRLVPHLRRYAPVVAGFYGVHSDDAVDMAAALGMHLSRGDSPLCCANCAVAAPRGAAXXXXXXXXXXXXXAELKLCGGCRCVRYCGAACQRAHYARHHKHVCKRLAAV 561
            GADPIECLERVELAPDAQLGTVLRATRA+AAG+VVLRERPLVV AGY DLMRQ                                        AGGGIDM  ATK +LLG SHGF+M D  A  G    DLS +P+E Q RRG MRL G  A SCAPNCMRSA AT GY TL+ATRAIAAG+A+TR   RL D+T+  R E L  +G ACACARC APD+ F LPC       CRGTLAP+LPA +     NP    Y +    E+ AWTW C+RCALRL G AML RL P + LSQRL+AL AAL  +       APL AL+AD RR+LCATHI+   AL  LA LY      +DD+AAARL+DDDG VI+SRARV ALAAKTEMDALRVLECT AGCD GAECNA H I+ + GI + +NA KSLQ+ SAA XXXXXXXXXXXXXXXXX     AARCPRLVPHLRRY P  A   G  SD+A+DMAAALG+ L  GD+PL CANC   +   AA               LK CG CRCVRYC AACQRAHYARHHK VCKRLAA+
Sbjct:    4 GADPIECLERVELAPDAQLGTVLRATRAIAAGDVVLRERPLVVSAGYADLMRQ----------------------------------------AGGGIDMDNATKFLLLGYSHGFAMGDPSAPYG---MDLSLLPNEYQERRGLMRLGGFMAPSCAPNCMRSARATPGYMTLVATRAIAAGDAVTRDAARLADTTKACREETLLSRGVACACARCAAPDLAFSLPCPAAAAGRCRGTLAPMLPASSPWPAANPADRAYVD--GDELAAWTWQCSRCALRLHGRAMLPRLQPASALSQRLEALDAALPYSDMDARLHAPLTALIADARRELCATHIVVHRALKTLAMLYVCTTVNYDDIAAARLSDDDGSVISSRARVLALAAKTEMDALRVLECTVAGCDCGAECNANHQIIKD-GIPYTMNAVKSLQHASAAXXXXXXXXXXXXXXXXXXXXXXXAARCPRLVPHLRRYVPFFAATVGAQSDEALDMAAALGV-LPGGDAPLYCANCLAVSAEAAA---------------LKSCGRCRCVRYCSAACQRAHYARHHKRVCKRLAAL 509          
BLAST of jgi.p|Trimin1|336732 vs. uniprot
Match: A0A836C8E8_9STRA (MYND-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8E8_9STRA)

HSP 1 Score: 275 bits (702), Expect = 4.150e-84
Identity = 208/418 (49.76%), Postives = 242/418 (57.89%), Query Frame = 0
Query:  173 TLIATRAIAAGEAITRSIVRLTDSTQVRRAELLTRQGHACACARCIAPDVGFGLPC-FVECCRGTLAPLLPAVAACLNPDGHTYANKGAGEVTAWTWHCTRCALRLPGGAMLARLSPVTPLSQRLDALYAALSLNATQPCYAAPLAALLADTRRQLCATHIIALSALNLLATLYAAAAARFDDVAAARLADDDGRVITSRARVNALAAKTEMDALRVLECTPAGCDRGAECNAKHPIVAEPGIAHAVNAFKSLQYTSAAAXXXXXXXXXXXXXXXXXAA--ARCPRLVPHLRRYAPVVAGFYGVHSDDAVDMAAALGMHLSRGDSPLCCANCAVAAPRGAAXXXXXXXXXXXXXAELKLCGGCRCVRYCGAACQRAHYARHHKHVCKRLAAV--------RAGCAAAVEFAARKGARG 579
            TL+ATRAIAAG+A+TR  V+L+ +TQ R  E+    G+ C CARC APD+GFGLPC   E CRGTLAPLLPA +A                         R  + L G           P S+R                                               TLYAAAAA  DD+AAARL+ +DG VITSRARV+ LAAKTEMDALRVLECT AGCD GAEC++ HP++ + G+ +A+NA KSLQ+ S A XXXXXXXXXXXXXXXXX    ARCPRLVPHLRRY PVVA   G  S++A+DMAAALG+ L  GD+PL CANC    P  AA               LK CG CRCVRYCGAACQRAHYARHHK VC+R AA+         AG AA V+F+   G  G
Sbjct:    2 TLVATRAIAAGDAVTRETVKLSVTTQARLEEMRLWHGYTCTCARCAAPDLGFGLPCPAAERCRGTLAPLLPASSA-------------------------RPPVNLDG-----------PPSRRSR---------------------------------------------TLYAAAAANCDDIAAARLSVEDGSVITSRARVHGLAAKTEMDALRVLECTVAGCDCGAECDSVHPVIKD-GVPYAMNALKSLQHASIAXXXXXXXXXXXXXXXXXXXXXXARCPRLVPHLRRYVPVVATMLGPQSEEALDMAAALGV-LPGGDAPLYCANCCT-VPTAAAL-------------NLKSCGRCRCVRYCGAACQRAHYARHHKRVCRRFAALVSERGGSGGAGGAAPVDFSGMGGGEG 322          
BLAST of jgi.p|Trimin1|336732 vs. uniprot
Match: A0A836CCS1_9STRA (MYND-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCS1_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 1.210e-13
Identity = 164/579 (28.32%), Postives = 227/579 (39.21%), Query Frame = 0
Query:   25 LRATRALAAGEVVLRERPLVVYAGY--TDLMRQVKRMPAKQIAELLGLLR-----------DETMRAPLALEEARSVAL------PAVREAGGGIDMGVATKLVLLGSSHGFSMPDSPARGGKLVYDLSCMPDENQCRRG---FMRLAGATALSCAPNCMRSACATLGYTTLIATRAIAAGEAITRSIVRLTDS----TQVRRAELLTRQGHACACARCIAPDVGFGLPCFVECCRGTLAPLLPAVAACLNPDGHTYANKGAGEVTAWTWHCTRCALRLPGGAMLARLSPVTPLSQRLDALYAALSLNATQPCYA---APLAALLADTRRQLCATHIIALSALNLLATLYAAAAARFDDVAAARLADDDGRVITSRARVNALAAKTEMD--ALRVLECTPAGCDR--GAE-CNAKHPIVAEPGIAHAVNAFKSLQYTSAAAXXXXXXXXXXXXXXXXXAAARCPRLVPHLRRYAPVVAGFYGVHSDDAVDMAAALGMHLSR-GDSPL-CCANC-------AVAAPRGAAXXXXXXXXXXXXXAELKLCGGCRCVRYCGAACQRAHYARHHKHVCKRLAA 560
            L+ATR  + G++VLRE PL+ +       L+     +  ++  ++L L R            E + A + L    + AL        + +A G  D    T   LL  +   S+P +  +  K           N    G     R+A   A SC PNC+ S     G  +  A   IAAG+ IT +   LT      T  R + L +R+   C CA+C  PDV  G+ C   C  G + P          P  H        +     W C  C        + A+L+    +  R  A +  LSL + +       A L  L+A    +LC +H + L A          AAA  + V+   +    G   T+      L   T ++   L + EC  AGC R  GAE C   HPI A           ++   T+                     A    RL     RY P++A  +G   D  +   A L + L R  D+ L  CA C         A      XXXXXXXXXXXXX    +CGGCR V YC   CQR H+ + HK VCKRLAA
Sbjct:   22 LQATRDFSPGDLVLREAPLLSFTTKDPVSLLDDFMALSPEEQQQVLDLFRLNDGANAHFASCEGLMATVELLADAAAALWMRAHGQGLSDAQGHYDTMRNTAHELLSRAMFSSVPFTTWQRQKDSLQAQAQLSYNSYESGTVALFRVASKAAYSCVPNCISSWQNPYGVISYYAAHPIAAGDPITIAFGTLTPGNATPTLERWSMLASRRDVVCTCAQCTGPDVTRGVKCAC-CAEGVVMPTFTP------PPLHVRELPSLEDAE---WRCDTCDKEPERTRLAAQLAEAECMEARAAAAHR-LSLRSIRDGLVYETAELYQLVARACAELCGSHNVVLVATR-------TAAALLEVVSEENMRHRAGYTNTASIVEQQLREATALNLMTLGLAECVTAGCVRRGGAERCERAHPIAA---------GLRNEARTALVTLMRQRDPVAFIRQQREEDATDVERLA----RYVPLLACAHGASDDVVLAAVAVLDLPLPRCADAGLRLCAACLHDRRRDGEAXXXXXXXXXXXXXXXXXXXXXXLVCGGCRLVAYCSHDCQRQHWKKCHKAVCKRLAA 569          
BLAST of jgi.p|Trimin1|336732 vs. uniprot
Match: A0A835YNU4_9STRA (MYND-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNU4_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 5.370e-10
Identity = 133/416 (31.97%), Postives = 167/416 (40.14%), Query Frame = 0
Query:  154 ALSCAPNCMRSACATLGYTTLIATRAIAAGEAITRSIVRLTDSTQVRR-AELLTRQGHACACARCIAPDVGFGLPCFVECCRGTLAPLLPAVAACLNPDGHTYANKGAGEVTAWTWHCTRCALRLPGGAMLARLSPVTPLSQRLDALYAALSLN-----ATQPCYAAPLAALLADTRRQLCATHIIALSALNLLATLYAAAAARFDDVAAARLADDDGRVITSRARVNALAAKTEMDALRVLECTPAGCDRGAECNAKHPIVAEPGIAHAVNAFKSLQYTSAAAXXXXXXXXXXXXXXXXXAAARCPRLVPHLRRYAPVVAGFYGVHSDDAVDMAAALGMH--LSRGD-SPLCCANCAVAAPRGAAXXXXXXXXXXXXXAELKLCGGCRCVRYCGAACQRAHYARHHKHVCKRLAA 560
            A SC PNC+ ++    G  +  A + IAAG+ IT      + +  + R AEL   +   CAC +C  P    G+ C   C  G   P          P     A  G   + A  W C  C  R P  A LA+       +QRL+A   A++ +     A     A   A LL   RR LC TH   L+A   L  L    AA         L    G    + A   A AA   M  +R+ E               HPI A  G+  A +A +++      A                   A C         Y P+VA   G   D  +  AA LG+   L   D  PL CA C     RG  XXXXXXXXXXX  A L LCGGC  V YCG  CQ+ H+ + HK VCK LAA
Sbjct:  119 AHSCTPNCLWTSQTPCGAMSYFAAQPIAAGDPITICYSDASTAPTLERWAELAQAKDFICACPQCSGPGATRGVRC-ARCADGVAVPTFAP------PPPRARAVPG---MEAAAWRCDACG-RAPDAAHLAQQLAE---AQRLEARVHAIAEDTRCGRALLEGGARAAATLLRRARRALCGTHGAVLAAARKLRLLQGVLAA---------LRRSGGAAGAANAHYEAAAAYDIM-LMRLAE--------------SHPIAAA-GVGDAYDALRNV-----VALRDPQEFVRKLSADDAQRLACC---------YLPLVACATGPSDDMVLAAAAILGLPPLLRCVDMQPLVCAACM----RGX-XXXXXXXXXXXPLAALLLCGGCGLVGYCGCECQKQHWQKCHKAVCKALAA 476          
BLAST of jgi.p|Trimin1|336732 vs. uniprot
Match: A0A835YS84_9STRA (MYND-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS84_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 1.120e-8
Identity = 157/602 (26.08%), Postives = 218/602 (36.21%), Query Frame = 0
Query:   21 LGTVLRATRALAAGEVVLRERPLVVYAGYT--DLMRQVKRMPAKQIAELLGLLR---DETM------RAPLALEE-ARSVALPAVREAG------------GGIDMGVATKLVLLGSSHGFSMPDSPARGGKLVYDLSCMP------DENQCRRGFMRLAGATALSCAPNCMRSACATLGYTTLIATRAIAAGEAITRSIVRL---TDSTQVRRAELLTRQGHA-CACARCIAPDVGFGLPCFVECCRGTLAPLLPAVAACLNPDGHTYANKGAGEVTAWTWHCTRCALRLPGGAMLARLSPVTPLSQRLDAL-----YAALSLNATQPCYAAPLAALLADTRRQLCATHIIALSALNLLATLYAAAAARFDDVAAARLADDDGRVITSRARVNALAAKTEMDALRVLECTPAGCDRGAE---CNAKHPIVAEPGIAHAVNAFKSLQYTSAAAXXXXXXXXXXXXXXXXXAAARCPRLVPHLRRYAPVVAGFYGVHSDDAVDMAAALGMHLSRGDSPLCCANCAVAAP-------RGAAXXXXXXXXXXXXX-------------AELKLCGGCRCVRYCGAACQRAHYARHHKHVCKRLAA 560
            LG VL+ATRA + G++VLRE+PL+ Y       ++     M A++  ++L + +    ET       R    LE  AR VA   +  +G               D+   T L     +H   M D P +   L    + +P      DE        RLA     +C PNC+ +      Y +  A   IAAG+ IT ++ R      +  +   E L R   A C CA+C  PDV  G+ C   C  G + P+         P  H    +   ++    W C  C       A+ A+L+    +  R   L         SL+         L  LL     +LC +H I    +  +A L  + +     V    + D         A++   A  T M+ L + EC  AGC R  +   C   HP+ A             L  T  A                          V  L RY P++A  YG   D  +  AA L +       P C        P       RGA        XXXXXX               L  CGGC  V YC   CQR H+ + HK VCK LAA
Sbjct:   15 LGRVLQATRAFSPGDLVLREQPLMCYINAVPHSVLNAFMTMSAEEQQQVLDMRKLQFGETAHFASCERRMGELEPMARCVAEERMHASGLQGRRLRDDLFRTAYDLHSVTNL-----NHR-RMADLPWQKDDLERLKAQLPPGYPASDEEITHGAVFRLASRAVPACVPNCVSTTQNPYNYMSYYAAHPIAAGDLITIALPRSGAGRPTATLEWWEQLARVRDAVCTCAKCTGPDVMCGVKC-ARCPNGVVTPMFTP------PQPH---ERELPKLEDAAWRCDACGAAPERAALAAQLAEAARMEARASTLADPRQLPIKSLSKLAVDELKELRHLLWRAGMELCGSHRIVHIVMRGMAMLQESQSRMNLGV----IVDIPHAAEYGAAQLQDAATLTLME-LELAECAAAGCARRGQVFGCPRMHPVAAG-----------QLDITRIALRIIGALRDPAAYIRKQKEETGGAD-VARLARYVPLLACAYGESHDAELAAAALLDL-----PPPRCAXXXXXXXPMCLHYLRRGAETYTSGGGXXXXXXXXXXXXXXXXXXAGALLKCGGCGLVAYCSRDCQRQHWKKCHKAVCKVLAA 578          
BLAST of jgi.p|Trimin1|336732 vs. uniprot
Match: A0A836CDU1_9STRA (MYND-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDU1_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 9.840e-8
Identity = 114/369 (30.89%), Postives = 143/369 (38.75%), Query Frame = 0
Query:  212 CACARCIAPDVGFGLPCFVECCRGTLAPLLPAVAACLNPDGHTYANKGAGEVTAWTWHCTRCALRLPGGAMLARLSP--------VTPLSQRLDALYAALSLNATQPCYAAPLAALLADTRRQLCATHIIALSALNLLATLYAAAAARFD------DVAAARLADDDGRVITSRARVNALAAKTEMDALRVLECTPAGCDR--GAE-CNAKHPIVA-EPGIAHAVNAFKSLQYTSAAAXXXXXXXXXXXXXXXXXAAARCPRLVPHLRRYAPVVAGFYGVHSDDAVDMAAALGMHLSR--GDSPLCCANCAVAAPRGAAXXXXXXXXXXXXXAELKLCGGCRCVRYCGAACQRAHYARHHKHVCKRLAA 560
            CACA+C  PDV  G+ C   C  G + P          P  H        ++    W C  C       A+ ARL+         +  + Q  D L     +   Q  Y      LL   R +LC TH I   A  + ATL  A +  F+       V  A +AD+  R           AA   +  L + EC  AGC R  GAE C   HPI A E  +A       + Q   A                           V  L RY P++A   G   D  +   A L + L R    +P  CA C      G    XXXXXXXXXXX  L +CGGC  V YC   CQR H+ +  K VCK+LAA
Sbjct:  193 CACAQCTGPDVTRGVKC-AHCANGVVMPTFAL------PPAHV---PQLPKLEDAAWLCDTCGDVPEHTALAARLAEAASTEALALADMRQLADQLVLVDLVPEMQELYR-----LLTRARAELCGTHNIVHLAQRIPATLLGAVS-EFNMQLVASGVGTAHVADEQLRD----------AAALNLTLLGLAECAAAGCARRRGAERCARVHPIAAGELDLARTTLVTLARQRDPAGFIRKQTEEDATD--------------VERLARYVPLLACASGASDDVVLAAVALLDLPLPRCVDAAPRRCAGCLHHRRCGVEAGXXXXXXXXXXXXXL-MCGGCELVAYCSRGCQRQHWKKCDKAVCKKLAA 520          
BLAST of jgi.p|Trimin1|336732 vs. uniprot
Match: A0A835YJF2_9STRA (MYND-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJF2_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 8.600e-7
Identity = 145/584 (24.83%), Postives = 203/584 (34.76%), Query Frame = 0
Query:   21 LGTVLRATRALAAGEVVLRERPLV--------VYAGYTDLMRQVKRMPAKQIAELLGLLRDETMRAPLALEE----ARSVALPAVREAGGGIDMGVATKLVLLGSSHGFSMPDSPARGGKLVYDLSCMPDENQCRRGFMRLAGATALSCAPNCMRSACATLG--------------YTTLIATRAIAAGEAITRSIVRLTDSTQVRR-AELLTRQGHACACARCIAPDVGFGLPCFVECCRGTLAPLLPAVAACLNPDGHTYANKGAGEVTAWTWHCTRCALRLPGGAMLARLSPVTPLSQRLDALYAALSLNATQPCYA------APLAALLADTRRQLCATHIIALSALNLLATLYAAAAARF-----DDVAAARLADDDGRVITSRARVNALAAKTEMDALRVLECTPAGCDR---GAECNAKHPIVAEPG---IAHAVNAFKSLQYTSAAAXXXXXXXXXXXXXXXXXAAARCPRLVPHLRRYAPVVAGFYGVHSDDAVDMAAALGMHLSRGDSPLCCANCAVAAPRGAAXXXXXXXXXXXXXAELKLCGGCRCVRYCGAACQRAHYARHHKHVCKRLAA 560
            +G VL+A+R  A G++VLRE  L+        +Y G+  L  Q +    +Q+ +L  L   ET R     +     A  +A+ A   AG  +    AT  +                 G+ V D +       C         AT L      +    A L                T   A   I AG+ IT +      +  + R  EL   +   C C RC     G  +P F           LP   A   P           E+    W C  C        + A+L+    +  R  AL A + L + +          A L  L+A  R +LC TH +   A   LA L+ A  A       D V   +LAD   R +          A   +  L + EC  AGC R    A C   HP+ A  G   +A    A  S+   S A                       P  V  L RY P++A      +++ +  AA L + L R         CA  A   AA               L  CGGC  + YC  +CQR H+ + HK VCK++AA
Sbjct:   15 MGRVLQASREFAPGDLVLREEALLSYVNEMPYLYDGFMALPSQEQ----QQVLDLHRLRYGETARFTSCEQRMAYIAAEIAVTASDAAGAAVQPINATNPL-----------------GQAVQDFTYRMMYKLCSMAQFNAHDATLLPWQEESIARMQAQLPPEARKLEVSAVFRVATRFYAVHPITAGDLITIAYKSWNATPTLERWTELARSKDFVCTCLRCAD---GVVMPTFS----------LPPQHARELP-----------ELEDAAWRCDACGAAPDSVRLAAQLAEAARMEARALAL-ANMHLLSDESILESAVREKAELRQLMARARAELCGTHRVLSVAARSLAALHDARYADLLKYYADTVGVDKLADAQLRDV----------AALRLLRLGLKECAAAGCTRRGGAASCARLHPVAANGGAIDLARGALATISMLQDSTA--------------FVRKQKQENPTDVERLARYVPLLACLLSARNNEVLAAAALLDLPLPR---------CAEPAGSSAAA------------VALLTCGGCGLLDYCSRSCQRRHWKKCHKKVCKKVAA 507          
BLAST of jgi.p|Trimin1|336732 vs. uniprot
Match: A0A835YUG0_9STRA (SET domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUG0_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 2.830e-5
Identity = 73/285 (25.61%), Postives = 120/285 (42.11%), Query Frame = 0
Query:   21 LGTVLRATRALAAGEVVLRERPLVVYA---GYTDLMRQVKRMPAKQIAELLGLLRDETMRAPLALEEARSVALPAVREAGGGIDMGVATKLVLLGSSHGFSMPDSPARGGKL-VYDLSCMPDENQCRRGFMRLAGATALSCAPNCMRSACATLGYTTLIATRAIAAGEAITRSIV---RLTDSTQVRRAELLTR-QGHACACARCIAPDVGFGLPCFVECCRGTLAPLLPAVAACLNPDGHTYANKGAGEVTAWTWHCTRCALRLPGGAMLAR-LSPVTPLSQRL 296
            +G VLRATRA A G++VLRE PL+V+    G  DL+ +  ++  ++  +LL +            ++ R      V E    I+  V + +    S   +          K   +D +   D++    G   LA     SC  NC  +  +  G  +  A R I+ G++I  SI+   R      ++R +L+ + +   C C RC  PD   G+ C   C  G   P  P +           + +    +   TW C  C    P  +MLA+ L+ V+ L+ +L
Sbjct:    1 MGRVLRATRAFAPGDLVLREAPLLVFVDDDGGHDLVAKALKLSEEERLKLLDMYHLRPG------DDPRFAIASYVTEK---IEKKVRSVVSSRASESAYRFAFEAISVAKFNAHDFTTASDQSL--SGLFPLASLACHSCDANCTFTTMSPSGVISYYAARRISEGDSI--SILYDGRNAGMPTLQRWKLMAKGRDFMCQCLRCTGPDAMSGIKCH-RCQEGVSMPTFPRLLP---------STRELPTIADATWLCDTCGCA-PEPSMLAKQLTEVSDLTTQL 261          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|336732 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A835YK69_9STRA0.000e+0100.00MYND-type domain-containing protein n=1 Tax=Tribon... [more]
A0A835YI78_9STRA1.970e-19958.37MYND-type domain-containing protein n=1 Tax=Tribon... [more]
A0A835YII0_9STRA3.440e-18159.86MYND-type domain-containing protein n=1 Tax=Tribon... [more]
A0A836C8E8_9STRA4.150e-8449.76MYND-type domain-containing protein n=1 Tax=Tribon... [more]
A0A836CCS1_9STRA1.210e-1328.32MYND-type domain-containing protein n=1 Tax=Tribon... [more]
A0A835YNU4_9STRA5.370e-1031.97MYND-type domain-containing protein n=1 Tax=Tribon... [more]
A0A835YS84_9STRA1.120e-826.08MYND-type domain-containing protein n=1 Tax=Tribon... [more]
A0A836CDU1_9STRA9.840e-830.89MYND-type domain-containing protein n=1 Tax=Tribon... [more]
A0A835YJF2_9STRA8.600e-724.83MYND-type domain-containing protein n=1 Tax=Tribon... [more]
A0A835YUG0_9STRA2.830e-525.61SET domain-containing protein n=1 Tax=Tribonema mi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR046341SET domain superfamilyGENE3D2.170.270.10SET domaincoord: 130..221
e-value: 3.9E-9
score: 38.2
IPR046341SET domain superfamilySUPERFAMILY82199SET domaincoord: 11..214
IPR002893Zinc finger, MYND-typePFAMPF01753zf-MYNDcoord: 498..555
e-value: 1.6E-6
score: 28.0
IPR002893Zinc finger, MYND-typePROSITEPS50865ZF_MYND_2coord: 498..555
score: 9.88289
NoneNo IPR availableGENE3D6.10.140.2220coord: 491..558
e-value: 4.6E-9
score: 38.0
NoneNo IPR availablePANTHERPTHR46455SET AND MYND DOMAIN CONTAINING, ARTHROPOD-SPECIFIC, MEMBER 4, ISOFORM Acoord: 144..348
NoneNo IPR availableSUPERFAMILY144232HIT/MYND zinc finger-likecoord: 524..557

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_85contigContig_85:69449..71742 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|336732mRNA_12158Tribonema minus UTEX_B_3156 mRNAContig_85 69449..71742 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|336732|MIX45495_3_12 ID=Trimin1|336732|MIX45495_3_12|Name=jgi.p|Trimin1|336732|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=585bp
MPGADPIECLERVELAPDAQLGTVLRATRALAAGEVVLRERPLVVYAGYT
DLMRQVKRMPAKQIAELLGLLRDETMRAPLALEEARSVALPAVREAGGGI
DMGVATKLVLLGSSHGFSMPDSPARGGKLVYDLSCMPDENQCRRGFMRLA
GATALSCAPNCMRSACATLGYTTLIATRAIAAGEAITRSIVRLTDSTQVR
RAELLTRQGHACACARCIAPDVGFGLPCFVECCRGTLAPLLPAVAACLNP
DGHTYANKGAGEVTAWTWHCTRCALRLPGGAMLARLSPVTPLSQRLDALY
AALSLNATQPCYAAPLAALLADTRRQLCATHIIALSALNLLATLYAAAAA
RFDDVAAARLADDDGRVITSRARVNALAAKTEMDALRVLECTPAGCDRGA
ECNAKHPIVAEPGIAHAVNAFKSLQYTSAAAAAEAPGAITTAAAAAAIAA
ARCPRLVPHLRRYAPVVAGFYGVHSDDAVDMAAALGMHLSRGDSPLCCAN
CAVAAPRGAAAAAAAVAAAAAAAAELKLCGGCRCVRYCGAACQRAHYARH
HKHVCKRLAAVRAGCAAAVEFAARKGARGRGLSG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR046341SET_dom_sf
IPR002893Znf_MYND