Trimin1|336506|MIX45269_13_64 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|336506
Unique NameTrimin1|336506|MIX45269_13_64
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length300
Homology
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BLAST of jgi.p|Trimin1|336506 vs. uniprot
Match: A0A835YRX7_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRX7_9STRA)

HSP 1 Score: 543 bits (1398), Expect = 3.540e-194
Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 0 
Query:    1 MAEAASASPAAGAGLDVHQILADAEDRGISIPRGKKECKEVVDSVIKVVQEYSDDKKVEPEAVIAGLEHMWGLTAKAGKKRKAEIDKRVPGPVGKKPVVDQEVMEWPVDDKGTSMRELSERLCLEAKKRGIALPEADEKAGDAPTIALCTDVLEQCKTERSTVDVIRALALLQEKTGVAEEPRVKNLVGDXXXXXXXXXXXXXXXQENTALVEALRELANSYFKAGAKDSKNRIRGAMLQRGATAIRDLDWAITPENMPVASGKSDKKVPNVGHDTIEYIKEFFETGKITKLEEAKIEE 299
            MAEAASASPAAGAGLDVHQILADAEDRGISIPRGKKECKEVVDSVIKVVQEYSDDKKVEPEAVIAGLEHMWGLTAKAGKKRKAEIDKRVPGPVGKKPVVDQEVMEWPVDDKGTSMRELSERLCLEAKKRGIALPEADEKAGDAPTIALCTDVLEQCKTERSTVDVIRALALLQEKTGVAEEPRVKNLVGDXXXXXXXXXXXXXXXQENTALVEALRELANSYFKAGAKDSKNRIRGAMLQRGATAIRDLDWAITPENMPVASGKSDKKVPNVGHDTIEYIKEFFETGKITKLEEAKIEE
Sbjct:    1 MAEAASASPAAGAGLDVHQILADAEDRGISIPRGKKECKEVVDSVIKVVQEYSDDKKVEPEAVIAGLEHMWGLTAKAGKKRKAEIDKRVPGPVGKKPVVDQEVMEWPVDDKGTSMRELSERLCLEAKKRGIALPEADEKAGDAPTIALCTDVLEQCKTERSTVDVIRALALLQEKTGVAEEPRVKNLVGDXXXXXXXXXXXXXXXQENTALVEALRELANSYFKAGAKDSKNRIRGAMLQRGATAIRDLDWAITPENMPVASGKSDKKVPNVGHDTIEYIKEFFETGKITKLEEAKIEE 299
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|336506 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YRX7_9STRA3.540e-194100.00Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 201..221
IPR027421DNA polymerase lambda lyase domain superfamilyGENE3D1.10.150.110coord: 199..296
e-value: 2.1E-12
score: 49.2
IPR027421DNA polymerase lambda lyase domain superfamilySUPERFAMILY47802DNA polymerase beta, N-terminal domain-likecoord: 205..294

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_84contigContig_84:26471..31123 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|336506mRNA_12088Tribonema minus UTEX_B_3156 mRNAContig_84 26254..31296 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|336506|MIX45269_13_64 ID=Trimin1|336506|MIX45269_13_64|Name=jgi.p|Trimin1|336506|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=300bp
MAEAASASPAAGAGLDVHQILADAEDRGISIPRGKKECKEVVDSVIKVVQ
EYSDDKKVEPEAVIAGLEHMWGLTAKAGKKRKAEIDKRVPGPVGKKPVVD
QEVMEWPVDDKGTSMRELSERLCLEAKKRGIALPEADEKAGDAPTIALCT
DVLEQCKTERSTVDVIRALALLQEKTGVAEEPRVKNLVGDEKTGVAEEPR
VKNLVQENTALVEALRELANSYFKAGAKDSKNRIRGAMLQRGATAIRDLD
WAITPENMPVASGKSDKKVPNVGHDTIEYIKEFFETGKITKLEEAKIEE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027421DNA_pol_lamdba_lyase_dom_sf