Trimin1|336498|MIX45261_8_87 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|336498
Unique NameTrimin1|336498|MIX45261_8_87
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length54
Homology
BLAST of jgi.p|Trimin1|336498 vs. uniprot
Match: A0A835YIM3_9STRA (Uncharacterized protein n=3 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIM3_9STRA)

HSP 1 Score: 103 bits (257), Expect = 6.150e-28
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0
Query:    1 MSKATALRDLADSMVEQTGAVDEKQLRPLIDEIGELKTQYRAVLGGVVRSNAP 53
            MSKATALRDLADSMVEQTGAVDEKQLRPLIDEIGELKTQYRAVLGGVVRSNAP
Sbjct:   21 MSKATALRDLADSMVEQTGAVDEKQLRPLIDEIGELKTQYRAVLGGVVRSNAP 73          
BLAST of jgi.p|Trimin1|336498 vs. uniprot
Match: D7FKG2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKG2_ECTSI)

HSP 1 Score: 47.8 bits (112), Expect = 1.650e-5
Identity = 21/42 (50.00%), Postives = 33/42 (78.57%), Query Frame = 0
Query:    4 ATALRDLADSMVEQTGAVDEKQLRPLIDEIGELKTQYRAVLG 45
            AT LR+ AD MV +TGA++ + ++P+IDEI  LK++Y+ V+G
Sbjct:   46 ATVLREKADEMVAETGAINFEIIQPMIDEIAVLKSKYKVVMG 87          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|336498 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A835YIM3_9STRA6.150e-28100.00Uncharacterized protein n=3 Tax=Tribonema minus Ta... [more]
D7FKG2_ECTSI1.650e-550.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_84contigContig_84:24585..25336 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|336498mRNA_12086Tribonema minus UTEX_B_3156 mRNAContig_84 24585..25463 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|336498|MIX45261_8_87 ID=Trimin1|336498|MIX45261_8_87|Name=jgi.p|Trimin1|336498|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=54bp
MSKATALRDLADSMVEQTGAVDEKQLRPLIDEIGELKTQYRAVLGGVVRS
NAP*
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