Trimin1|335551|MIX44314_2_18 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|335551
Unique Name	Trimin1\|335551\|MIX44314_2_18
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	485

Homology

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BLAST of jgi.p|Trimin1|335551 vs. uniprot
Match: A0A835YJQ9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJQ9_9STRA)

HSP 1 Score: 850 bits (2196), Expect = 1.510e-309
Identity = 484/484 (100.00%), Postives = 484/484 (100.00%), Query Frame = 0

Query:    1 MLARVARRSVAMTHIACMRNLSTSAVRAFEDAPVPDSVPDGNAGLPPQLYMFGTHNEDAEVEMHALDIVAASRXXXXXXXXXAPSLRVMSIAASGTHALAMCSNSLVKSIDAVDMNPNQILLSKLTAAAAAGLASADDLAAFLGNAAVGDGNAHVCACHGALANAQCAAALNPAVPTDLLSGGDADARAAAYAQRVRRHLDAEAAAFWDANAATVRAGTMRCGAMERFYVVLRAYMARFGASPEGLRSAVHATYGAPAMWNNXXXXXXXXXXXXXXXXXXXXXXYMPAMPEHATQRLVEGLPPVASAGLIEAMAAAQAVPPRANLVLHTLLHGTYPMDSDAHRPVFLRKERFAAARAHGTLSPRLNFHVGPIQEVGPRLAAALRSGSGSTAAAAGYDLITISNILDMLDDVAAAKPVVQAIASCLAPGGALLCRWTGSHARPGFVSEVFRACGLKVDDAVDARLMALETSFYMPEVTLGVRRQQ 484
            MLARVARRSVAMTHIACMRNLSTSAVRAFEDAPVPDSVPDGNAGLPPQLYMFGTHNEDAEVEMHALDIVAASRXXXXXXXXXAPSLRVMSIAASGTHALAMCSNSLVKSIDAVDMNPNQILLSKLTAAAAAGLASADDLAAFLGNAAVGDGNAHVCACHGALANAQCAAALNPAVPTDLLSGGDADARAAAYAQRVRRHLDAEAAAFWDANAATVRAGTMRCGAMERFYVVLRAYMARFGASPEGLRSAVHATYGAPAMWNNXXXXXXXXXXXXXXXXXXXXXXYMPAMPEHATQRLVEGLPPVASAGLIEAMAAAQAVPPRANLVLHTLLHGTYPMDSDAHRPVFLRKERFAAARAHGTLSPRLNFHVGPIQEVGPRLAAALRSGSGSTAAAAGYDLITISNILDMLDDVAAAKPVVQAIASCLAPGGALLCRWTGSHARPGFVSEVFRACGLKVDDAVDARLMALETSFYMPEVTLGVRRQQ
Sbjct:    1 MLARVARRSVAMTHIACMRNLSTSAVRAFEDAPVPDSVPDGNAGLPPQLYMFGTHNEDAEVEMHALDIVAASRXXXXXXXXXAPSLRVMSIAASGTHALAMCSNSLVKSIDAVDMNPNQILLSKLTAAAAAGLASADDLAAFLGNAAVGDGNAHVCACHGALANAQCAAALNPAVPTDLLSGGDADARAAAYAQRVRRHLDAEAAAFWDANAATVRAGTMRCGAMERFYVVLRAYMARFGASPEGLRSAVHATYGAPAMWNNXXXXXXXXXXXXXXXXXXXXXXYMPAMPEHATQRLVEGLPPVASAGLIEAMAAAQAVPPRANLVLHTLLHGTYPMDSDAHRPVFLRKERFAAARAHGTLSPRLNFHVGPIQEVGPRLAAALRSGSGSTAAAAGYDLITISNILDMLDDVAAAKPVVQAIASCLAPGGALLCRWTGSHARPGFVSEVFRACGLKVDDAVDARLMALETSFYMPEVTLGVRRQQ 484

[Close]

BLAST of jgi.p|Trimin1|335551 vs. uniprot
Match: A0A836CCB0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCB0_9STRA)

HSP 1 Score: 363 bits (932), Expect = 9.750e-120
Identity = 211/397 (53.15%), Postives = 258/397 (64.99%), Query Frame = 0

Query:   89 MSIAASGTHALAMCSNSLVKSIDAVDMNPNQILLSKLTAAAAAGLASADDLAAFLGNAAVGDGNAHVCACHGALANAQCAAALNPAVPTDLLSGGDADARAAAYAQRVRRHL-DAEAAAFWDANAATVRAGTMRCGAMERFYVVLRAYMARFGASPEGLRSAVHATYGAPAMWNNXXXXXXXXXXXXXXXXXXXXXXYMPAMPEHATQRLVEGLPPVASAGLIEAMAAAQAVPPRANLVLHTLLHGTYPMDSDAHRPVFLRKERFAAARAHGTLSPRLNFHVGPIQEVGPRLAAALRSGSGSTA---AAAGYDLITISNILDMLDDVAAAKPVVQAIASCLAPGGALLCRWTGSHARPGFVSEVFRACGLKVDDAVDARLMALETSFYMPEVTLGVR 481
            MSIA +GTHAL MCSN+LVK+IDAVD+NP+Q+LL+KLTAAAAA L+  +D AAFLG                                    +G DA  R A Y   VR  + +++ AAFWDAN  T+ AGTMRCGAMER + VLR ++A+  +  +G+  A HATYG  A W                        YMP + + A  RL+  LPPVA A L +AMAAA A PP  NLV H +L+GT+PM+ DA RP+FLR+ + AAARA G L PRLNFHVGPIQEVGPRL   LR+ + ST+     AGYD IT+SNIL+MLD  AAA+PVV+A+ASCLAPGGALLCRWTG+ A PGFV+ VFR CGL VDD V+ RL+ALETS YMPE+ LGV+
Sbjct:    1 MSIAGAGTHALGMCSNALVKTIDAVDINPSQVLLAKLTAAAAAALSHPEDFAAFLG------------------------------------TGRDAPTRLALYKDFVRPKIPESDVAAFWDANLDTIGAGTMRCGAMERMFAVLRDHIAQHCSDRDGVVRAAHATYGDAACWKK----------------------YMPTLADDAVARLIANLPPVAGAALADAMAAANATPPVRNLVAHIVLNGTFPMEPDAARPLFLREAQHAAARAQGVLPPRLNFHVGPIQEVGPRLTQRLRADTESTSIGTGGAGYDFITLSNILNMLDSTAAAEPVVRAMASCLAPGGALLCRWTGTEALPGFVAHVFRKCGLDVDDDVNKRLLALETSVYMPELALGVK 339

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|335551 vs. uniprot

BLAST of jgi.p|Trimin1|335551 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A835YJQ9_9STRA	1.510e-309	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CCB0_9STRA	9.750e-120	53.15	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021829	Protein of unknown function DUF3419	PFAM	PF11899	DUF3419	coord: 50..438 e-value: 2.7E-22 score: 79.5
IPR029063	S-adenosyl-L-methionine-dependent methyltransferase superfamily	GENE3D	3.40.50.150	Vaccinia Virus protein VP39	coord: 344..472 e-value: 5.5E-7 score: 31.3
IPR029063	S-adenosyl-L-methionine-dependent methyltransferase superfamily	SUPERFAMILY	53335	S-adenosyl-L-methionine-dependent methyltransferases	coord: 351..466

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_8	contig	Contig_8:1537342..1541651 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|335551	mRNA_2873	Tribonema minus UTEX_B_3156	mRNA	Contig_8 1537312..1541651 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|335551|MIX44314_2_18 ID=Trimin1|335551|MIX44314_2_18|Name=jgi.p|Trimin1|335551|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=485bp
MLARVARRSVAMTHIACMRNLSTSAVRAFEDAPVPDSVPDGNAGLPPQLY
MFGTHNEDAEVEMHALDIVAASRRAAAAAAAAAPSLRVMSIAASGTHALA
MCSNSLVKSIDAVDMNPNQILLSKLTAAAAAGLASADDLAAFLGNAAVGD
GNAHVCACHGALANAQCAAALNPAVPTDLLSGGDADARAAAYAQRVRRHL
DAEAAAFWDANAATVRAGTMRCGAMERFYVVLRAYMARFGASPEGLRSAV
HATYGAPAMWNNASPEGLRRAVHATYGATATWNKYMPAMPEHATQRLVEG
LPPVASAGLIEAMAAAQAVPPRANLVLHTLLHGTYPMDSDAHRPVFLRKE
RFAAARAHGTLSPRLNFHVGPIQEVGPRLAAALRSGSGSTAAAAGYDLIT
ISNILDMLDDVAAAKPVVQAIASCLAPGGALLCRWTGSHARPGFVSEVFR
ACGLKVDDAVDARLMALETSFYMPEVTLGVRRQQ*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR021829	DUF3419
IPR029063	SAM-dependent_MTases_sf