Trimin1|335449|MIX44212_2_16 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|335449
Unique NameTrimin1|335449|MIX44212_2_16
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length508
Homology
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BLAST of jgi.p|Trimin1|335449 vs. uniprot
Match: A0A835YMZ2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMZ2_9STRA)

HSP 1 Score: 857 bits (2215), Expect = 1.140e-311
Identity = 507/507 (100.00%), Postives = 507/507 (100.00%), Query Frame = 0 
Query:    1 MARRSGEIKIGTKRAPLPEQSCPIQQLQQDAWAAAADGKDAPLIAARDALAALHPARCLDPWWKPEGQDRLTIEQAALSGSGTCMQVLVALIKALPPGAVLYTQAAAAPARGRRAPLPWLCGRTRNLFYLAVWGNGSPANCDLWHGKPGEAVPPGRVKWDPDVRVLDTLKALRPLLDLVQPAHRAYVINEGLLQLAITLRLRATVMYLVNELSVDTNAPMLDCQGCEMAATCVDLAIKGESSWDADPATSIALLLWVRTGGLRKKRSTTGTAEDKWLRELGVQPETARLAGEPCQRLRPPSPLLHQLQQQRLPXXXXLQLQEPTQHMLDLAAAALGAAALRSLVATATRATXXXXXXXXXXXXXXXXXXXXXXXXMPAVXXAATGAVDPCRALPEGVAVGAGANMDSAVPAATHPYYQXXXXXXXXQRSPLQQLVHKNAELPHPLFAPAAAVAVGTAVXXXXXXXXVHSRGIXXXXXXXXXXXALLTALGVATAKHERAMSIQAAGP 507
            MARRSGEIKIGTKRAPLPEQSCPIQQLQQDAWAAAADGKDAPLIAARDALAALHPARCLDPWWKPEGQDRLTIEQAALSGSGTCMQVLVALIKALPPGAVLYTQAAAAPARGRRAPLPWLCGRTRNLFYLAVWGNGSPANCDLWHGKPGEAVPPGRVKWDPDVRVLDTLKALRPLLDLVQPAHRAYVINEGLLQLAITLRLRATVMYLVNELSVDTNAPMLDCQGCEMAATCVDLAIKGESSWDADPATSIALLLWVRTGGLRKKRSTTGTAEDKWLRELGVQPETARLAGEPCQRLRPPSPLLHQLQQQRLPXXXXLQLQEPTQHMLDLAAAALGAAALRSLVATATRATXXXXXXXXXXXXXXXXXXXXXXXXMPAVXXAATGAVDPCRALPEGVAVGAGANMDSAVPAATHPYYQXXXXXXXXQRSPLQQLVHKNAELPHPLFAPAAAVAVGTAVXXXXXXXXVHSRGIXXXXXXXXXXXALLTALGVATAKHERAMSIQAAGP
Sbjct:    1 MARRSGEIKIGTKRAPLPEQSCPIQQLQQDAWAAAADGKDAPLIAARDALAALHPARCLDPWWKPEGQDRLTIEQAALSGSGTCMQVLVALIKALPPGAVLYTQAAAAPARGRRAPLPWLCGRTRNLFYLAVWGNGSPANCDLWHGKPGEAVPPGRVKWDPDVRVLDTLKALRPLLDLVQPAHRAYVINEGLLQLAITLRLRATVMYLVNELSVDTNAPMLDCQGCEMAATCVDLAIKGESSWDADPATSIALLLWVRTGGLRKKRSTTGTAEDKWLRELGVQPETARLAGEPCQRLRPPSPLLHQLQQQRLPXXXXLQLQEPTQHMLDLAAAALGAAALRSLVATATRATXXXXXXXXXXXXXXXXXXXXXXXXMPAVXXAATGAVDPCRALPEGVAVGAGANMDSAVPAATHPYYQXXXXXXXXQRSPLQQLVHKNAELPHPLFAPAAAVAVGTAVXXXXXXXXVHSRGIXXXXXXXXXXXALLTALGVATAKHERAMSIQAAGP 507
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|335449 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YMZ2_9STRA1.140e-311100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 410..437
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 413..434

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_8contigContig_8:1305986..1307607 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|335449mRNA_2849Tribonema minus UTEX_B_3156 mRNAContig_8 1305986..1307662 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|335449|MIX44212_2_16 ID=Trimin1|335449|MIX44212_2_16|Name=jgi.p|Trimin1|335449|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=508bp
MARRSGEIKIGTKRAPLPEQSCPIQQLQQDAWAAAADGKDAPLIAARDAL
AALHPARCLDPWWKPEGQDRLTIEQAALSGSGTCMQVLVALIKALPPGAV
LYTQAAAAPARGRRAPLPWLCGRTRNLFYLAVWGNGSPANCDLWHGKPGE
AVPPGRVKWDPDVRVLDTLKALRPLLDLVQPAHRAYVINEGLLQLAITLR
LRATVMYLVNELSVDTNAPMLDCQGCEMAATCVDLAIKGESSWDADPATS
IALLLWVRTGGLRKKRSTTGTAEDKWLRELGVQPETARLAGEPCQRLRPP
SPLLHQLQQQRLPPPPPLQLQEPTQHMLDLAAAALGAAALRSLVATATRA
TTALVLVAAAAAVAVAVTVAAPAAAMPAVAAAATGAVDPCRALPEGVAVG
AGANMDSAVPAATHPYYQQQQQQQHQQRSPLQQLVHKNAELPHPLFAPAA
AVAVGTAVAPAATAKAVHSRGIASAAVAMATATALLTALGVATAKHERAM
SIQAAGP*
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