Trimin1|334411|MIX43174_24_35 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|334411
Unique NameTrimin1|334411|MIX43174_24_35
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length522
Homology
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BLAST of jgi.p|Trimin1|334411 vs. uniprot
Match: A0A836C9I9_9STRA (Tfp pilus assembly protein PilF n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9I9_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 1.320e-18
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 0 
Query:    1 MRSVLREAEKLFWRALAVREEALGVEHPDTGTSLNNIASLLHDQGKFVE 49
            MRSVLREAEKLFWRALAVREEALGVEHPDTGTSLNNIASLLHDQGKFVE
Sbjct:    1 MRSVLREAEKLFWRALAVREEALGVEHPDTGTSLNNIASLLHDQGKFVE 49
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BLAST of jgi.p|Trimin1|334411 vs. uniprot
Match: A0A835ZHC3_9STRA (Tfp pilus assembly protein PilF n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHC3_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 3.010e-6
Identity = 30/46 (65.22%), Postives = 35/46 (76.09%), Query Frame = 0 
Query:    2 RSVLREAEKLFWRALAVREEALGVEHPDTGTSLNNIASLLHDQGKF 47
            R+VLREA  L+ RALA+REE LG  HPDT TSLNN+A LL  QG +
Sbjct:    3 RNVLREAAPLYERALAIREEVLGPTHPDTATSLNNLAGLLEAQGDY 48
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BLAST of jgi.p|Trimin1|334411 vs. uniprot
Match: UPI001F0E682D (tetratricopeptide repeat protein n=1 Tax=Cylindrospermopsis raciborskii TaxID=77022 RepID=UPI001F0E682D)

HSP 1 Score: 54.7 bits (130), Expect = 3.610e-6
Identity = 23/43 (53.49%), Postives = 34/43 (79.07%), Query Frame = 0 
Query:    7 EAEKLFWRALAVREEALGVEHPDTGTSLNNIASLLHDQGKFVE 49
            EAE+L+ RAL++RE+ LG  HPD  +SLNN+A+L  +QG++ E
Sbjct:    2 EAEQLYIRALSIREQQLGENHPDVASSLNNLAALYENQGRYTE 44
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BLAST of jgi.p|Trimin1|334411 vs. uniprot
Match: A0A838EQG9_9CHLR (Tetratricopeptide repeat protein n=1 Tax=Ktedonobacteraceae bacterium TaxID=2740538 RepID=A0A838EQG9_9CHLR)

HSP 1 Score: 55.1 bits (131), Expect = 5.040e-6
Identity = 24/40 (60.00%), Postives = 32/40 (80.00%), Query Frame = 0 
Query:    7 EAEKLFWRALAVREEALGVEHPDTGTSLNNIASLLHDQGK 46
            +AE L+ RALA+RE+ LG +HPDT +SLNN+A L  +QGK
Sbjct:    4 QAEPLYVRALAIREQELGAQHPDTASSLNNLAELYRNQGK 43
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BLAST of jgi.p|Trimin1|334411 vs. uniprot
Match: A0A535FCZ5_9CHLR (Tetratricopeptide repeat protein (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535FCZ5_9CHLR)

HSP 1 Score: 56.2 bits (134), Expect = 1.820e-5
Identity = 27/40 (67.50%), Postives = 30/40 (75.00%), Query Frame = 0 
Query:    7 EAEKLFWRALAVREEALGVEHPDTGTSLNNIASLLHDQGK 46
            EAE L+ RAL +REE LG  HPDT TSLNN+ASL   QGK
Sbjct:    4 EAEPLYVRALHIREEQLGAHHPDTSTSLNNLASLYGSQGK 43
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BLAST of jgi.p|Trimin1|334411 vs. uniprot
Match: A0A835YTN6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTN6_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 6.760e-5
Identity = 28/39 (71.79%), Postives = 32/39 (82.05%), Query Frame = 0 
Query:    2 RSVLREAEKLFWRALAVREEALGVEHPDTGTSLNNIASL 40
            RSVLREAE L  RALA+R++ LG EH DT TSLNN+ASL
Sbjct:   26 RSVLREAESLHRRALAIRQQVLGTEHLDTATSLNNLASL 64
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|334411 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A836C9I9_9STRA1.320e-18100.00Tfp pilus assembly protein PilF n=1 Tax=Tribonema ... [more]
A0A835ZHC3_9STRA3.010e-665.22Tfp pilus assembly protein PilF n=1 Tax=Tribonema ... [more]
UPI001F0E682D3.610e-653.49tetratricopeptide repeat protein n=1 Tax=Cylindros... [more]
A0A838EQG9_9CHLR5.040e-660.00Tetratricopeptide repeat protein n=1 Tax=Ktedonoba... [more]
A0A535FCZ5_9CHLR1.820e-567.50Tetratricopeptide repeat protein (Fragment) n=1 Ta... [more]
A0A835YTN6_9STRA6.760e-571.79Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002151Kinesin light chainPRINTSPR00381KINESINLIGHTcoord: 402..423
score: 25.45
coord: 323..340
score: 43.33
coord: 367..387
score: 58.57
coord: 236..255
score: 34.5
coord: 258..276
score: 35.79
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 31..64
e-value: 0.16
score: 21.1
coord: 201..234
e-value: 0.17
score: 21.0
coord: 411..444
e-value: 1.5
score: 17.8
coord: 117..150
e-value: 3.9E-4
score: 29.8
coord: 327..360
e-value: 0.0068
score: 25.6
coord: 73..108
e-value: 51.0
score: 8.8
coord: 159..192
e-value: 23.0
score: 11.9
coord: 243..276
e-value: 0.067
score: 22.3
coord: 369..402
e-value: 0.0092
score: 25.2
coord: 285..318
e-value: 0.096
score: 21.8
coord: 453..486
e-value: 1.2
score: 18.2
IPR019734Tetratricopeptide repeatPFAMPF13176TPR_7coord: 203..237
e-value: 0.0036
score: 17.2
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 327..360
score: 8.6439
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 336..517
e-value: 1.2E-64
score: 219.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 231..327
e-value: 5.7E-27
score: 96.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 94..224
e-value: 2.8E-52
score: 179.6
coord: 3..93
e-value: 8.2E-36
score: 125.5
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 112..233
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 237..357
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 363..510
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 6..93
NoneNo IPR availablePFAMPF13424TPR_12coord: 33..92
e-value: 1.8E-15
score: 57.0
coord: 120..191
e-value: 9.9E-19
score: 67.4
coord: 412..482
e-value: 1.3E-17
score: 63.8
coord: 241..315
e-value: 3.2E-18
score: 65.8
NoneNo IPR availablePFAMPF13374TPR_10coord: 368..407
e-value: 9.9E-13
score: 47.5
coord: 6..29
e-value: 4.5E-5
score: 23.1
coord: 326..365
e-value: 2.7E-11
score: 42.9
NoneNo IPR availablePANTHERPTHR45783KINESIN LIGHT CHAINcoord: 395..505
coord: 181..285
coord: 6..112
coord: 352..438
coord: 97..194
coord: 269..362
coord: 291..409
coord: 57..148

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_76contigContig_76:408536..410101 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|334411mRNA_11366Tribonema minus UTEX_B_3156 mRNAContig_76 408536..410480 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|334411|MIX43174_24_35 ID=Trimin1|334411|MIX43174_24_35|Name=jgi.p|Trimin1|334411|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=522bp
MRSVLREAEKLFWRALAVREEALGVEHPDTGTSLNNIASLLHDQGKFVEA
EPLYLRALAIREKVLGAEHPTTATSLNNLASLLKAQGKLAEADSEPLYRR
ALTVSKQVLGTEHPATASSLNNLALLLQAQGKLAEAEPLYQRALAIREEV
LGAKHPDTAQSLNNLALLLQAEGKLAEAELLNRRALAIWEEALGTEHSDT
ATSLNNLALLLKAQGKSVEAEPLYLRALAIREEALGAEHPDTAQSLNNLA
LQLQAQGRLVEAEPLYRRALAIWEEALGAEHPDTAQLLINLALLLKAQGK
LAEAAPLCRRALAINELRLGDEHPYTATTLNHLGLLLKAQGKLAEAEPLY
RRALTIREKALGGKHSNTALSLNNLALLLQAQGKLAEAEPLCRRALAIRE
EALGAEHSTTVQSFNNLAVLLQAQGKLADAEPLYRRVLVNREQVLGAEHP
DTSTSLNNLASLLQAQGKLAKAEPLYRRALVIREVALGAEHPDTTRSRDG
LAGLLRSKKKWWRRSRWTVRW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002151Kinesin_light
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf