Trimin1|182466|e_gw1.540.4.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|182466
Unique NameTrimin1|182466|e_gw1.540.4.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length292
Homology
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BLAST of jgi.p|Trimin1|182466 vs. uniprot
Match: A0A836CB88_9STRA (Uncharacterized protein n=4 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB88_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 5.170e-11
Identity = 79/99 (79.80%), Postives = 80/99 (80.81%), Query Frame = 0 
Query:    1 MAPPTLLVPAPAATLIVPPVVDAPDANSNSPPAPESPLPTVRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLAALLDEPLL 99
            MAPP+LLVPAPAA L  PPVVDAPDANS SPPAPESPLPTVRL  XXXXXXXXXXXXX         XXXXXXXXXXXXXXXXX    PLAALLDEPLL
Sbjct:    1 MAPPSLLVPAPAAILTAPPVVDAPDANSKSPPAPESPLPTVRLTGXXXXXXXXXXXXXTPPVLPDLDXXXXXXXXXXXXXXXXXTLTSPLAALLDEPLL 99
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|182466 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836CB88_9STRA5.170e-1179.80Uncharacterized protein n=4 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 262..292
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..62
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 19..62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_540contigContig_540:2310..3578 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|182466mRNA_18807Tribonema minus UTEX_B_3156 mRNAContig_540 2310..3578 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|182466|e_gw1.540.4.1 ID=Trimin1|182466|e_gw1.540.4.1|Name=jgi.p|Trimin1|182466|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=292bp
MAPPTLLVPAPAATLIVPPVVDAPDANSNSPPAPESPLPTVRLTGPPTPP
EALPLPTSTPPVLPDLDAPELSTSLPDIVPAADATLTSPLAALLDEPLLR
LMLPPSPLLLNPAVSCSAPPAPLVPLPTVRLKAPPLPPVAPPVVMSTAPL
SPAPEVPDRRARLPLTPLEPLSPEAKLTEPPPVELPSPAVTRTLPPSPAV
PVPAPMLTAPPLADTPASIMTAPPSPTVPDPTVRLSSPPLPAVATPVLMR
TAPVLPRAAVPELTDTSPLTPAKAALPDCTDTAPLLPELPLP
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