Trimin1|182089|e_gw1.352.2.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|182089
Unique NameTrimin1|182089|e_gw1.352.2.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length269
Homology
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BLAST of jgi.p|Trimin1|182089 vs. uniprot
Match: A0A835Z5R0_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5R0_9STRA)

HSP 1 Score: 483 bits (1242), Expect = 3.210e-168
Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 0 
Query:    1 LPHTLRELDLSAACIQSGPLPPHLTSLSTSQDSGEPIGDLPITLERLAVNAAFEQRLGHLPACLKVITSDLDDDVEFDQLFGELPPQLQVLDLISFSEFNQHLDALPCHLLKLTLGCGSDQPLGTLPDTLEELLFYDGFPGSIFNXXXXXXXXXXXXXRLSXXXXXXXXXXXXXXEYLECMVSQPLAPLPCSLQHLLIWNSAYHHDLGALPPSLVELRILPAVPGEDGAYQHRLQPIHPSLKAVAISRDYAYLDDLAGVKLAHNDMRH 268
            LPHTLRELDLSAACIQSGPLPPHLTSLSTSQDSGEPIGDLPITLERLAVNAAFEQRLGHLPACLKVITSDLDDDVEFDQLFGELPPQLQVLDLISFSEFNQHLDALPCHLLKLTLGCGSDQPLGTLPDTLEELLFYDGFPGSIFNXXXXXXXXXXXXXRLSXXXXXXXXXXXXXXEYLECMVSQPLAPLPCSLQHLLIWNSAYHHDLGALPPSLVELRILPAVPGEDGAYQHRLQPIHPSLKAVAISRDYAYLDDLAGVKLAHNDMRH
Sbjct:  210 LPHTLRELDLSAACIQSGPLPPHLTSLSTSQDSGEPIGDLPITLERLAVNAAFEQRLGHLPACLKVITSDLDDDVEFDQLFGELPPQLQVLDLISFSEFNQHLDALPCHLLKLTLGCGSDQPLGTLPDTLEELLFYDGFPGSIFNXXXXXXXXXXXXXRLSXXXXXXXXXXXXXXEYLECMVSQPLAPLPCSLQHLLIWNSAYHHDLGALPPSLVELRILPAVPGEDGAYQHRLQPIHPSLKAVAISRDYAYLDDLAGVKLAHNDMRH 477
[Close]
BLAST of jgi.p|Trimin1|182089 vs. uniprot
Match: A0A835Z7I5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7I5_9STRA)

HSP 1 Score: 269 bits (687), Expect = 7.260e-87
Identity = 180/271 (66.42%), Postives = 203/271 (74.91%), Query Frame = 0 
Query:    1 LPHTLRELDLSAACIQS--GPLPPHLTSLSTSQDSGEPIGDLPITLERLAVNAAFEQRLGHLPACL-KVITSDLDDD-VEFDQLFGELPPQLQVLDLISFSEFNQHLDALPCHLLKLTLGCGSDQPLGTLPDTLEELLFYDGFPGSIFNXXXXXXXXXXXXXRLSXXXXXXXXXXXXXXEYLECM-VSQPLAPLPCSLQHLLIWNSAYHHDLGALPPSLVELRILPAVPGEDGAYQHRLQPIHPSLKAVAISRDYAYLDDLAGVKLAHNDM 266
            LPHTLRELD+S   ++   GPLPPHLTSLS S  S   +G+LP TLE+L ++AA+   LG LPA L ++ TSD  +D  EFDQ FGELP  LQVLDL+ F  FN  L ALP HL+ LTLGC  +Q LG LPDTLE L+FYDG   SIF+XXXXXXXXXXXXX   XXXXXXXXXXXXXX YLEC+  +  LAPLP +LQHLLIWN+A          SLVELRI PA PGE GAY HRLQPIHP+LKAVAISRDYAYLDDLAGV+LAHN M
Sbjct:    7 LPHTLRELDMSGTFMEPPPGPLPPHLTSLSMSNGSDLALGELPFTLEKLHMSAAYNXXLGPLPASLVEITTSDRSEDGAEFDQSFGELPRGLQVLDLLEFHAFNHDLGALPAHLVMLTLGCQFNQHLGVLPDTLEVLVFYDGDDDSIFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYLECVEYNHSLAPLPLTLQHLLIWNAAXXXXXXXXXXSLVELRIHPAEPGEQGAYTHRLQPIHPALKAVAISRDYAYLDDLAGVELAHNGM 277
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|182089 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A835Z5R0_9STRA3.210e-168100.00Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A835Z7I5_9STRA7.260e-8766.42Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 1..223
e-value: 9.8E-7
score: 29.5
NoneNo IPR availablePANTHERPTHR32134:SF114FNIP REPEAT-CONTAINING PROTEIN DDB_G0274063/DDB_G0272642-RELATEDcoord: 98..219
NoneNo IPR availablePANTHERPTHR32134:SF114FNIP REPEAT-CONTAINING PROTEIN DDB_G0274063/DDB_G0272642-RELATEDcoord: 1..179
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 1..179
coord: 98..219

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_352contigContig_352:16735..17541 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|182089mRNA_18833Tribonema minus UTEX_B_3156 mRNAContig_352 16735..17541 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|182089|e_gw1.352.2.1 ID=Trimin1|182089|e_gw1.352.2.1|Name=jgi.p|Trimin1|182089|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=269bp
LPHTLRELDLSAACIQSGPLPPHLTSLSTSQDSGEPIGDLPITLERLAVN
AAFEQRLGHLPACLKVITSDLDDDVEFDQLFGELPPQLQVLDLISFSEFN
QHLDALPCHLLKLTLGCGSDQPLGTLPDTLEELLFYDGFPGSIFNHPLGT
LPKSLRKLRLSDAFDHPLGLLPSKLEYLECMVSQPLAPLPCSLQHLLIWN
SAYHHDLGALPPSLVELRILPAVPGEDGAYQHRLQPIHPSLKAVAISRDY
AYLDDLAGVKLAHNDMRH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf