Trimin1|178427|e_gw1.170.43.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|178427
Unique NameTrimin1|178427|e_gw1.170.43.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length270
Homology
BLAST of jgi.p|Trimin1|178427 vs. uniprot
Match: A0A836CJS5_9STRA (Spo11/DNA topoisomerase VI subunit A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJS5_9STRA)

HSP 1 Score: 518 bits (1334), Expect = 1.990e-185
Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 0
Query:    1 MVLRSAAALLRGAKTATQRELYYMDTNLFAGGQAQCNAAILTVSALLREPRHCLGVVASSRGFYTGRLRTRHAAGXXXXXXXXXXXXDWHDPRTAGGTGASVNSDWISHALEAESDAQFLLVVEKDGAFARLSEDRFYDRLPCIIVTGQGFPPVAVRAMVRALQSALNLPAYGLVDCGPFGLSLLLTYVHGGARMGEQAAHYTADVKWLGLRPSQLDALDLPAQAYAPQSDNDQRRARTLAESIHVTARPELEAEVDYWSRGGYKVCIG 269
            MVLRSAAALLRGAKTATQRELYYMDTNLFAGGQAQCNAAILTVSALLREPRHCLGVVASSRGFYTGRLRTRHAAGXXXXXXXXXXXXDWHDPRTAGGTGASVNSDWISHALEAESDAQFLLVVEKDGAFARLSEDRFYDRLPCIIVTGQGFPPVAVRAMVRALQSALNLPAYGLVDCGPFGLSLLLTYVHGGARMGEQAAHYTADVKWLGLRPSQLDALDLPAQAYAPQSDNDQRRARTLAESIHVTARPELEAEVDYWSRGGYKVCIG
Sbjct:    1 MVLRSAAALLRGAKTATQRELYYMDTNLFAGGQAQCNAAILTVSALLREPRHCLGVVASSRGFYTGRLRTRHAAGXXXXXXXXXXXXDWHDPRTAGGTGASVNSDWISHALEAESDAQFLLVVEKDGAFARLSEDRFYDRLPCIIVTGQGFPPVAVRAMVRALQSALNLPAYGLVDCGPFGLSLLLTYVHGGARMGEQAAHYTADVKWLGLRPSQLDALDLPAQAYAPQSDNDQRRARTLAESIHVTARPELEAEVDYWSRGGYKVCIG 269          
BLAST of jgi.p|Trimin1|178427 vs. uniprot
Match: D7G356_ECTSI (Sporulation-specific protein 11 homologue n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G356_ECTSI)

HSP 1 Score: 238 bits (607), Expect = 4.640e-74
Identity = 130/265 (49.06%), Postives = 165/265 (62.26%), Query Frame = 0
Query:    9 LLRGAKTATQRELYYMDTNLFAGGQAQCNAAILTVSALLREPRHCLGVVASSRGFYTGRLRTRHAAGXXXXXXXXXXXXDWHDPRTAGGT-GASVNSDWISHALEAESDAQFLLVVEKDGAFARLSEDRFYDR-----------LPCIIVTGQGFPPVAVRAMVRALQSALNLPAYGLVDCGPFGLSLLLTYVHGGARMGEQAAHY-TADVKWLGLRPSQLDALDLPAQAYAPQSDNDQRRARTLAESIHVTARPELEAE-VDYW 259
            LL   KTATQRE+YY     FA  Q +CN AIL   +LL EPRHCLG+VASSRG+  GR+  R                DW DPR+ GG+ G ++ SDW++  LE +SDA+ +LVVEKDG F R+ ED FYDR           +P ++VTGQGFPP+AVRA V  L  AL+LP  GLVDC PFGLS+ L Y  G +R G  +A +   ++KW+GLRPSQLD LDLP + +   S  D  RA+++A S  VT  P+   E V+YW
Sbjct:    7 LLETRKTATQREIYYTFVKHFAN-QTKCNDAILDCCSLLGEPRHCLGIVASSRGYLAGRISIRGEG-----------FEDWQDPRSTGGSSGLAITSDWLTRPLELKSDARIVLVVEKDGVFNRMVEDGFYDRANVSTLHYLRRIPSVLVTGQGFPPLAVRACVYRLAEALDLPVLGLVDCNPFGLSVFLQYKEGSSRQGRGSAKFGVPEMKWVGLRPSQLDDLDLPDEVHQTLSQQDLSRAQSVANSTLVTDNPDTYGEEVEYW 259          
BLAST of jgi.p|Trimin1|178427 vs. uniprot
Match: A0A6H5KRW2_9PHAE (TP6A_N domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRW2_9PHAE)

HSP 1 Score: 222 bits (565), Expect = 1.110e-68
Identity = 125/262 (47.71%), Postives = 159/262 (60.69%), Query Frame = 0
Query:    9 LLRGAKTATQRELYYMDTNLFAGGQAQCNAAILTVSALLREPRHCLGVVASSRGFYTGRLRTRHAAGXXXXXXXXXXXXDWHDPRTAGGT-GASVNSDWISHALEAESDAQFLLVVEKDGAFARLSEDRFYDRLPCIIVTGQGFPPVAVRAMVRALQSALNLPAYGLVDCGPFGLSLLLTYVHGGARMGEQAAHYTA-DVKWLGLRPSQLDALDLPAQA--------YAPQSDNDQRRARTLAESIHVTARPELEAE-VDYW 259
            LL   KTATQRE+YY     FA  Q +CN AIL   +LL EPRHCLG+VASSRG+  GR+  R                DW DPR+ GG+ G ++ SDW++  LE +SDA+ +LVVEKDG F R+ ED F D      +TGQGFPP+AVRA V  L  AL+LP  GLVDC PFGLS+ L Y  G ++ G  +A +   ++KW+GLRPSQLD LDLP +A        +   S  D  RA+++A S  VT  P+   E  +YW
Sbjct:    7 LLETRKTATQREIYYTFVKHFAN-QTKCNDAILDCCSLLGEPRHCLGIVASSRGYLAGRISVRGEG-----------FQDWQDPRSTGGSSGLAITSDWLTRPLELKSDARIILVVEKDGVFNRMVEDGFCD------ITGQGFPPLAVRACVYRLAEALDLPVLGLVDCNPFGLSVFLQYKEGSSKQGRGSAKFRVPEMKWVGLRPSQLDDLDLPEEASKKIITEVHQTLSQQDLARAQSVANSTLVTDNPDTYGEEAEYW 250          
BLAST of jgi.p|Trimin1|178427 vs. uniprot
Match: A0A485L555_9STRA (Aste57867_16293 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L555_9STRA)

HSP 1 Score: 201 bits (511), Expect = 9.330e-60
Identity = 109/267 (40.82%), Postives = 148/267 (55.43%), Query Frame = 0
Query:    1 MVLRSAAALLRGAKTATQRELYYMDTNLFAGGQAQCNAAILTVSALLREPRHCLGVVASSRGFYTGRLRTRHAAGXXXXXXXXXXXXDWHDPRTAGGTGASVNSDWISHALEA-ESDAQFLLVVEKDGAFARLSEDRFYDRLPCIIVTGQGFPPVAVRAMVRALQSALNLPAYGLVDCGPFGLSLLLTYVHGGARMGEQAAHYTADVKWLGLRPSQLDALDLPAQAYAPQSDNDQRRARTLAESIHVTARPELEAEVDYWSRGGYKV 266
            +VL++   LL+  KT TQRELYY+ T  F   Q   +  IL V   L  PR CL +V   +G +TGR+                    W D    G TG  +  + +    E   SDA F+LV+EKDG F RLSED F+D +PCI+VTG+GFP +A R  VR L   L +P  GL DC PFGLS+LLTY  G ARM   A HYT D++W+GLRPS +  LDLP       S +D+ R ++L +  ++  +P+ + E+  W    +K+
Sbjct:   41 LVLQTVYNLLKEDKTITQRELYYLHT--FFETQKDADECILDVGGFLGVPRECLNIVGGVKGCFTGRISIAENG-------------LWIDCAKDGPTGRPITRETLRLQPEQITSDANFILVIEKDGIFNRLSEDCFFDTMPCILVTGKGFPDLATRCFVRKLSDCLGIPVLGLCDCNPFGLSILLTYKLGSARMPLDAMHYTVDIRWIGLRPSHVPQLDLPPVVKKKFSKHDKHRIQSLLQHPYIQMQPQYQEEIACWVHDPFKI 292          
BLAST of jgi.p|Trimin1|178427 vs. uniprot
Match: A0A6A4Z7N9_9STRA (TP6A_N domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z7N9_9STRA)

HSP 1 Score: 197 bits (500), Expect = 1.670e-58
Identity = 110/273 (40.29%), Postives = 151/273 (55.31%), Query Frame = 0
Query:    1 MVLRSAAALLRGAKTATQRELYYMDTNLFAGGQAQCNAAILTVSALLREPRHCLGVVASSRGFYTGRLRTRHAAGXXXXXXXXXXXXDWHDPRTAGGTGASVNSDWIS-HALEAESDAQFLLVVEKDGA------FARLSEDRFYDRLPCIIVTGQGFPPVAVRAMVRALQSALNLPAYGLVDCGPFGLSLLLTYVHGGARMGEQAAHYTADVKWLGLRPSQLDALDLPAQAYAPQSDNDQRRARTLAESIHVTARPELEAEVDYWSRGGYKV 266
            +VL++   LL   K+ TQRELYY+    F   Q + + +IL     L  PR CL +V   +G +TGR+  +                 W D    G +G  +  D +  H  + +SDA+F+LV+EKDG       F RLSED F+D +PCI+VTG+GFP +A R  V+ L   L +P  GL DC  FGLS+LLTY  G ARM   + HY  D++WLGLRPSQL+AL+LP       S+ D+RR ++L     V  +P+   E+D W    YKV
Sbjct:    3 LVLQTVHQLLLEDKSITQRELYYLHP--FFESQKEADESILDTGGFLGVPRECLNIVGGVKGCFTGRISIQENG-------------QWVDCAKDGPSGRPITRDILRLHHDQIDSDARFILVIEKDGIMSAYSIFNRLSEDLFFDAMPCILVTGKGFPDLATRCFVKKLSDFLQVPVLGLCDCNSFGLSILLTYKFGSARMPLDSIHYAVDIEWLGLRPSQLEALELPNVVKKKCSNQDKRRMKSLMLHPFVQMQPQYRHEIDLWLADPYKV 260          
BLAST of jgi.p|Trimin1|178427 vs. uniprot
Match: A0A1V9YKA4_9STRA (TP6A_N domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YKA4_9STRA)

HSP 1 Score: 199 bits (505), Expect = 2.820e-58
Identity = 113/274 (41.24%), Postives = 154/274 (56.20%), Query Frame = 0
Query:    1 MVLRSAAALLRGAKTATQRELYYMDTNLFAGGQAQCNAAILTVSALLREPRHCLGVVASSRGFYTGRLRTRHAAGXXXXXXXXXXXXDWHDPRTAGGTGASVNSDWI---SHALEAE-----SDAQFLLVVEKDGAFARLSEDRFYDRLPCIIVTGQGFPPVAVRAMVRALQSALNLPAYGLVDCGPFGLSLLLTYVHGGARMGEQAAHYTADVKWLGLRPSQLDALDLPAQAYAPQSDNDQRRARTLAESIHVTARPELEAEVDYWSRGGYKV 266
            +VL+ A  LLR  KT TQRELYY+    F   Q + +  IL VS LLR PR CL +V   +G++TGR+  +                 W D    GGTG  ++ D +   SH ++       SDA++++VVEK+G F RL ED F++R+PCI+VTG+GFP +A R  V+ L  AL +P  GL DC PFGLS+ L+Y  G ARM   +  Y  D+KW+GLRP    AL+LP       S +D+RR + L     V    +  AEVD W+R   K+
Sbjct:   82 LVLQIAHQLLRENKTVTQRELYYLHP--FFTTQQEADECILDVSGLLRVPRECLNIVGGVKGYFTGRICYQET------------NNHWIDCSQDGGTGRPISRDILRLESHQMQIFGVFNLSDAKYVIVVEKEGIFNRLGEDLFFNRVPCILVTGKGFPDLATRIFVKKLSDALRVPVLGLCDCNPFGLSIFLSYKFGSARMPLDSVAYAVDIKWVGLRPLDAMALELPKVVRTKFSKHDKRRLQGLLAHPFVQTNAQYGAEVDEWARLPQKI 341          
BLAST of jgi.p|Trimin1|178427 vs. uniprot
Match: A0A1W0A8B8_9STRA (TP6A_N domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A8B8_9STRA)

HSP 1 Score: 188 bits (478), Expect = 2.270e-54
Identity = 103/267 (38.58%), Postives = 149/267 (55.81%), Query Frame = 0
Query:    1 MVLRSAAALLRGAKTATQRELYYMDTNLFAGGQAQCNAAILTVSALLREPRHCLGVVASSRGFYTGRLRTRHAAGXXXXXXXXXXXXDWHDPRTAGGTGASVNSDWIS-HALEAESDAQFLLVVEKDGAFARLSEDRFYDRLPCIIVTGQGFPPVAVRAMVRALQSALNLPAYGLVDCGPFGLSLLLTYVHGGARMGEQAAHYTADVKWLGLRPSQLDALDLPAQAYAPQSDNDQRRARTLAESIHVTARPELEAEVDYWSRGGYKV 266
            +VL+ A  LL   KT TQRELYY+  N F   Q + +  IL V+ LL  PR CL +V + +G++ G +  +  +G             W D R  G TG  +  D +     +  SDAQ+++V+EKDG F RL ED+F+  +P I+VTG+GFP +A R  V+ L     +P   L DC PFGLS+LL+Y  G ARM   +  Y  D KW+GLRP +   L+LP  A  P S +D+ R + L +  ++       AEV++W++  YK+
Sbjct:   78 LVLQIAQQLLLQDKTITQRELYYI--NPFFSNQQEADECILDVAGLLCVPRECLNIVGAVKGYFNGCITYQERSG------------QWTDCRLDGPTGRPITQDILRLRDDQITSDAQYIIVIEKDGIFNRLGEDQFFHNIPSILVTGRGFPDLATRVFVKKLSERFQIPVLCLCDCNPFGLSILLSYKFGSARMPIDSICYAVDAKWIGLRPLEAMLLELPDVAKKPFSKHDKSRLQWLLQHPYLKIDSAYHAEVEHWTQYAYKI 330          
BLAST of jgi.p|Trimin1|178427 vs. uniprot
Match: A0A7S2JQ12_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JQ12_9STRA)

HSP 1 Score: 183 bits (465), Expect = 2.290e-52
Identity = 109/291 (37.46%), Postives = 156/291 (53.61%), Query Frame = 0
Query:    1 MVLRSAAALLRGAKTATQRELYYMDTNLFAGGQAQCNAAILTVSALLREPRHCLGVVASSRGFYTGRLRTRHAAGXXXXXXXXXXXXDWHDPRTAGGT-------------GASVNSDWISHA--------LEAESDAQFLLVVEKDGAFARLSEDRFYDRLPCIIVTGQGFPPVAVRAMVRALQSALNLPAYGLVDCGPFGLSLLLTYVHGGARMGEQAAHYTADVKWLGLRPSQLDAL--DLPAQAYAPQSDNDQRRARTLAESI--HVTARPELEAEVDYWSRGGYKV 266
            MV+  A  LL  ++T+T REL+Y     F   Q   +AAIL V+ LL  PR  LG+VAS +G+Y GRL+   +A             +  D    G               G  +  +W+              ESDA  +L VEK+G + RLSEDRF+D++PCI++TG+GFP +A RA V AL + LN+P YGL DC PFG+S+L+TY  G +++G  A  Y+  VKWLGLRPS ++ L  +LP + +   ++ D R+  +L       V   PE + E+      GYK+
Sbjct:   47 MVMSYAHNLLLNSRTSTTRELFYFYVTHFKS-QRDTDAAILDVTRLLDVPRVSLGLVASPKGWYCGRLKLTKSASTPLSRARTDGDFELSDADDNGVDIQVTDCSTLTSIHGLPITREWLDVVSWKENDPNFSIESDAVCILCVEKEGIYTRLSEDRFFDKVPCILITGKGFPDLASRACVFALHNMLNIPVYGLCDCNPFGVSVLMTYWRGSSKLGNDADSYSVPVKWLGLRPSHIEELSPELPQEVFQNLTNTDFRKLDSLMSETCDFVDKNPERKEELFEMQENGYKL 336          
BLAST of jgi.p|Trimin1|178427 vs. uniprot
Match: A0A067D4V8_SAPPC (TP6A_N domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D4V8_SAPPC)

HSP 1 Score: 183 bits (465), Expect = 2.600e-52
Identity = 107/271 (39.48%), Postives = 152/271 (56.09%), Query Frame = 0
Query:    1 MVLRSAAALLRGAKTATQRELYYMDTNLFAGGQAQCNAAILTVSALLREPRHCLGVVASSRGFYTGRLRTRHAAGXXXXXXXXXXXXDWHDPRTAGGTGASVNSDWISHALEAE---SDAQFLLVVEKDGAFARLSEDRFYDRLPCIIVTGQGFPPVAVRAMVRALQSALNLPAYGLVDCGPFGLSLLLTYVHGGARMGEQAAHY--TADVKWLGLRPSQLDALDLPAQAYAPQSDNDQRRARTLAESIHVTARPELEAEVDYWSRGGYKV 266
            +VL+ A  LL   KT TQRELYY+    F   Q + +  IL VS LL  PR CL +V   +G+++GRL  R A               W D    G +G  ++ + +   LE+E   SDAQ+++VVEK+G F RL ED F++R+PCI+VTG+GFP +A R  V+ L+  L +P  GL DC PFGLS+LL++  G ARM   +  Y  + D+ W+GLRP    +L+LP   +   S +D RR ++L     V       AEV +W +   K+
Sbjct:   87 LVLQIAHQLLLEDKTVTQRELYYLHP--FFTTQQEADECILDVSGLLCVPRECLNIVGGVKGYFSGRLCYRSA------------DKQWIDCSLDGASGRPISRELLR--LESEDMISDAQYIIVVEKEGIFNRLGEDLFFNRVPCILVTGKGFPDLATRIFVKKLRDTLRVPVLGLCDCNPFGLSILLSFKFGSARMPLDSVAYGTSVDMHWIGLRPLDTASLELPDIVHTKFSKHDTRRLQSLVAHPFVQMDAAYRAEVQHWMKHPLKI 341          
BLAST of jgi.p|Trimin1|178427 vs. uniprot
Match: A0A8K1C609_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C609_PYTOL)

HSP 1 Score: 183 bits (464), Expect = 3.760e-52
Identity = 107/264 (40.53%), Postives = 141/264 (53.41%), Query Frame = 0
Query:    1 MVLRSAAALLRGAKTATQRELYYMDTNLFAGGQAQCNAAILTVSALLREPRHCLGVVASSRGFYTGRLRTRHAAGXXXXXXXXXXXXDWHDPRTAGGTGASVNSDWISHALEAESDAQFLLVVEKDGAFARLSEDRFYDRLPCIIVTGQGFPPVAVRAMVRALQSALNLPAYGLVDCGPFGLSLLLTYVHGGARMGEQAAHYTADVKWLGLRPSQLDALDLPAQAYAPQSDNDQRRARTLAESIHVTARPELEAEVDYWSRGGY 264
            +VL +   LL   KT TQRE+YYM    F   Q + + AIL    +LR PR  L +V +++G ++G L+                  +W      G           +   E  SDA  +LVVEKDG F RL EDRF D+LP IIVTG+GFP +A R  V  L   L LP  GL DC PFGLS++LTY  G ARM      +  D+KW+GLRPS+++ LDLP  A+   S  D+ RA++LA+S  V +  E   EV  WS   +
Sbjct:   91 LVLHTVYELLSQRKTVTQREIYYMHP--FFKNQNEADEAILDTGCILRAPRGSLNIVGATKGCFSGCLKLMKEG-------------EWRSYNN-GDEHPITQQILQAKPSEIASDACCILVVEKDGIFNRLREDRFVDQLPSIIVTGRGFPDLATREFVSLLSRTLELPVIGLSDCNPFGLSIMLTYKLGSARMPLDTRPFGVDIKWVGLRPSRIEQLDLPPTAFKELSSKDRARAKSLAQSDFVQSHCEYVEEVRMWSESAF 338          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|178427 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CJS5_9STRA1.990e-185100.00Spo11/DNA topoisomerase VI subunit A n=1 Tax=Tribo... [more]
D7G356_ECTSI4.640e-7449.06Sporulation-specific protein 11 homologue n=1 Tax=... [more]
A0A6H5KRW2_9PHAE1.110e-6847.71TP6A_N domain-containing protein (Fragment) n=1 Ta... [more]
A0A485L555_9STRA9.330e-6040.82Aste57867_16293 protein n=1 Tax=Aphanomyces stella... [more]
A0A6A4Z7N9_9STRA1.670e-5840.29TP6A_N domain-containing protein n=2 Tax=Aphanomyc... [more]
A0A1V9YKA4_9STRA2.820e-5841.24TP6A_N domain-containing protein n=1 Tax=Achlya hy... [more]
A0A1W0A8B8_9STRA2.270e-5438.58TP6A_N domain-containing protein n=1 Tax=Thraustot... [more]
A0A7S2JQ12_9STRA2.290e-5237.46Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A067D4V8_SAPPC2.600e-5239.48TP6A_N domain-containing protein n=2 Tax=Saprolegn... [more]
A0A8K1C609_PYTOL3.760e-5240.53Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002815Spo11/DNA topoisomerase VI subunit APRINTSPR01550TOP6AFAMILYcoord: 120..137
score: 51.74
coord: 33..50
score: 23.96
coord: 18..29
score: 43.75
coord: 144..165
score: 38.35
coord: 176..192
score: 32.35
coord: 51..66
score: 32.03
IPR002815Spo11/DNA topoisomerase VI subunit APANTHERPTHR10848MEIOTIC RECOMBINATION PROTEIN SPO11coord: 2..268
IPR013049Spo11/DNA topoisomerase VI, subunit A, N-terminalPFAMPF04406TP6A_Ncoord: 2..56
e-value: 5.3E-10
score: 39.1
NoneNo IPR availableGENE3D3.40.1360.10coord: 83..268
e-value: 6.8E-40
score: 139.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 74..95
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 1..59
e-value: 4.4E-8
score: 35.0
IPR034136Topoisomerase 6 subunit A/Spo11, TOPRIM domainCDDcd00223TOPRIM_TopoIIB_SPOcoord: 119..268
e-value: 2.58037E-41
score: 137.771
IPR036078Spo11/DNA topoisomerase VI subunit A superfamilySUPERFAMILY56726DNA topoisomerase IV, alpha subunitcoord: 3..268

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_170contigContig_170:312705..316620 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|178427mRNA_15277Tribonema minus UTEX_B_3156 mRNAContig_170 312705..316620 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|178427|e_gw1.170.43.1 ID=Trimin1|178427|e_gw1.170.43.1|Name=jgi.p|Trimin1|178427|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=270bp
MVLRSAAALLRGAKTATQRELYYMDTNLFAGGQAQCNAAILTVSALLREP
RHCLGVVASSRGFYTGRLRTRHAAGGGGGGGDGGGGGDWHDPRTAGGTGA
SVNSDWISHALEAESDAQFLLVVEKDGAFARLSEDRFYDRLPCIIVTGQG
FPPVAVRAMVRALQSALNLPAYGLVDCGPFGLSLLLTYVHGGARMGEQAA
HYTADVKWLGLRPSQLDALDLPAQAYAPQSDNDQRRARTLAESIHVTARP
ELEAEVDYWSRGGYKVCIG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002815Spo11/TopoVI_A
IPR013049Spo11/TopoVI_A_N
IPR036388WH-like_DNA-bd_sf
IPR034136TOPRIM_Topo6A/Spo11
IPR036078Spo11/TopoVI_A_sf