Trimin1|178394|e_gw1.169.44.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|178394
Unique NameTrimin1|178394|e_gw1.169.44.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length483
Homology
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BLAST of jgi.p|Trimin1|178394 vs. uniprot
Match: A0A835Z7E6_9STRA (Ankyrin repeat-containing domain protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7E6_9STRA)

HSP 1 Score: 514 bits (1325), Expect = 3.670e-177
Identity = 483/483 (100.00%), Postives = 483/483 (100.00%), Query Frame = 0 
Query:    1 MVAWWQLQRQVEGNNAARTKRAFAREELFLSVLPRAAAGSQTCEFAASIGSAPLLERLRAQVPPFEWSTETSIAAVGGGHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDATSPRLANIAAFEGHLDVLQYLREQGCAWDDSTTAAAAAGGHLHVLQWCRAAVPPXXXXXXXXXXXXXXXXXXXXXXLIPELLREGVRWLVCISLMSTAXXXXXXXXXXXXAENAPAGQPLWTASDNAADACTIAAAHGHLDVLRCLRGELRCPWNEEXXXXXXXXXXXXXXQWLHAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSDSSLDCTCCYCKAQTLAMVQWLRSLAPPCPWTSMTCWKAAKSGNYELLRWMCESDPDPCPWDARVCT 483
            MVAWWQLQRQVEGNNAARTKRAFAREELFLSVLPRAAAGSQTCEFAASIGSAPLLERLRAQVPPFEWSTETSIAAVGGGHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDATSPRLANIAAFEGHLDVLQYLREQGCAWDDSTTAAAAAGGHLHVLQWCRAAVPPXXXXXXXXXXXXXXXXXXXXXXLIPELLREGVRWLVCISLMSTAXXXXXXXXXXXXAENAPAGQPLWTASDNAADACTIAAAHGHLDVLRCLRGELRCPWNEEXXXXXXXXXXXXXXQWLHAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSDSSLDCTCCYCKAQTLAMVQWLRSLAPPCPWTSMTCWKAAKSGNYELLRWMCESDPDPCPWDARVCT
Sbjct:    1 MVAWWQLQRQVEGNNAARTKRAFAREELFLSVLPRAAAGSQTCEFAASIGSAPLLERLRAQVPPFEWSTETSIAAVGGGHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDATSPRLANIAAFEGHLDVLQYLREQGCAWDDSTTAAAAAGGHLHVLQWCRAAVPPXXXXXXXXXXXXXXXXXXXXXXLIPELLREGVRWLVCISLMSTAXXXXXXXXXXXXAENAPAGQPLWTASDNAADACTIAAAHGHLDVLRCLRGELRCPWNEEXXXXXXXXXXXXXXQWLHAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSDSSLDCTCCYCKAQTLAMVQWLRSLAPPCPWTSMTCWKAAKSGNYELLRWMCESDPDPCPWDARVCT 483
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BLAST of jgi.p|Trimin1|178394 vs. uniprot
Match: A0A835Z6S9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6S9_9STRA)

HSP 1 Score: 298 bits (764), Expect = 5.070e-92
Identity = 241/305 (79.02%), Postives = 261/305 (85.57%), Query Frame = 0 
Query:    1 MVAWWQLQRQVEGNNAARTKRAFAREELFLSVLPRAAAGSQTCEFAASIGSAPLLERLRAQVPPFEWSTETSIAAVGGGHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDATSPRLANIAAFEGHLDVLQYLREQGCAWDDSTTAAAAAGGHLHVLQWCRAAVPPXXXXXXXXXXXXXXXXXXXXXXLIPELLREGVRWLVCISLMSTAXXXXXXXXXXXXAENAPAGQPLWTASDNAADACTIAAAHGHLDVLRCLRGELRCPWNEEXXXXXXXXXXXXXXQWLHAGG 305
            M +WW+L++Q++ +NAA T+RA AREELFLSVLPRAAAGSQ CEFAA IGS PLLER+RAQ PPFEWS ETS+AA      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   S RLA +AAFEGHLD LQYL ++GCAWD+STTAAAAAG HLHVLQWCRAA PPXXXXXXXXXXXXXXXXXXXXXXL+PELLR+GV  L+  SL+S A            A NAPAGQPLWTASD+A DACT AAAHGHLDVLRCLRGEL+CPWNEEXXXXXXXXXXXXXXQWLHAGG
Sbjct:    1 MTSWWRLKKQLQESNAAHTRRAVAREELFLSVLPRAAAGSQICEFAAGIGSVPLLERVRAQAPPFEWSNETSVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSSRLATVAAFEGHLDALQYLHQEGCAWDESTTAAAAAGDHLHVLQWCRAATPPXXXXXXXXXXXXXXXXXXXXXXLLPELLRQGVGCLIPGSLLSRAANAGHLAMLQWMAANAPAGQPLWTASDDAVDACTKAAAHGHLDVLRCLRGELKCPWNEEXXXXXXXXXXXXXXQWLHAGG 305
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BLAST of jgi.p|Trimin1|178394 vs. uniprot
Match: A0A7S1VGX5_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Sexangularia sp. CB-2014 TaxID=1486929 RepID=A0A7S1VGX5_9EUKA)

HSP 1 Score: 53.5 bits (127), Expect = 3.980e-5
Identity = 24/46 (52.17%), Postives = 31/46 (67.39%), Query Frame = 0 
Query:  129 SPRLANIAAFEGHLDVLQYLREQGCAWDDSTTAAAAAGGHLHVLQW 174
            SP L   AA  G +D L++LRE+GCAWD+S   AA A G L +L+W
Sbjct:   82 SPTLCAGAAQAGAIDCLEWLRERGCAWDESVVTAAVAAGDLPLLRW 127
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BLAST of jgi.p|Trimin1|178394 vs. uniprot
Match: A0A6H5KEA5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEA5_9PHAE)

HSP 1 Score: 56.2 bits (134), Expect = 4.540e-5
Identity = 24/38 (63.16%), Postives = 26/38 (68.42%), Query Frame = 0 
Query:  140 GHLDVLQYLREQGCAWDDSTTAAAAAGGHLHVLQWCRA 177
            G+LD+L   R  GC W   T AAAA GGHLHVLQW RA
Sbjct:   29 GNLDLLAAARRSGCPWSHRTAAAAAEGGHLHVLQWARA 66
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|178394 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A835Z7E6_9STRA3.670e-177100.00Ankyrin repeat-containing domain protein (Fragment... [more]
A0A835Z6S9_9STRA5.070e-9279.02Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1VGX5_9EUKA3.980e-552.17Hypothetical protein (Fragment) n=1 Tax=Sexangular... [more]
A0A6H5KEA5_9PHAE4.540e-563.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 31..478
e-value: 2.0E-24
score: 87.9
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 75..410
NoneNo IPR availablePANTHERPTHR46586ANKYRIN REPEAT-CONTAINING PROTEINcoord: 255..473
coord: 41..418
NoneNo IPR availableSUPERFAMILY140860Pseudo ankyrin repeat-likecoord: 395..480

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_169contigContig_169:88999..93116 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|178394mRNA_17004Tribonema minus UTEX_B_3156 mRNAContig_169 88999..93116 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|178394|e_gw1.169.44.1 ID=Trimin1|178394|e_gw1.169.44.1|Name=jgi.p|Trimin1|178394|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=483bp
MVAWWQLQRQVEGNNAARTKRAFAREELFLSVLPRAAAGSQTCEFAASIG
SAPLLERLRAQVPPFEWSTETSIAAVGGGHLSVLKWLRNQDPPCSWNDEA
CEGAVSGGHHDVLRWMRSQPSPCPWDATSPRLANIAAFEGHLDVLQYLRE
QGCAWDDSTTAAAAAGGHLHVLQWCRAAVPPCSWDIDVAEAAVKSGNLTL
VQWLIPELLREGVRWLVCISLMSTAARAGHLTVLQWLAENAPAGQPLWTA
SDNAADACTIAAAHGHLDVLRCLRGELRCPWNEEACSAAAQNGHLDVLQW
LHAGGCPWDKHTSYYAAKRGDLDMFQWACSRGCPWSKITSRVAAEQGHFE
MLQWAHENGCPWDTATCTALAANGRLDMLQWAHANGCPFNESTCSAAALN
GKFDTLQWLHEQVCKSDSSLDCTCCYCKAQTLAMVQWLRSLAPPCPWTSM
TCWKAAKSGNYELLRWMCESDPDPCPWDARVCT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf