Trimin1|178244|e_gw1.167.22.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|178244
Unique NameTrimin1|178244|e_gw1.167.22.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length144
Homology
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BLAST of jgi.p|Trimin1|178244 vs. uniprot
Match: A0A835Z6X7_9STRA (Amino_oxidase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6X7_9STRA)

HSP 1 Score: 262 bits (669), Expect = 3.290e-88
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0 
Query:    1 LPWSVALPSATDNETVIIGTYDYNRSAVNVVEGDQARFTFTHTSVTPEAQRLRLSVAALQGRKRTHFAGAWTSGLGHHEDAVRSGIEAANRIMAGAGAYPVLERAVPLHQPFAPSSAPAANXXXXXXXXXALFEPQPQNVVTF 143
            LPWSVALPSATDNETVIIGTYDYNRSAVNVVEGDQARFTFTHTSVTPEAQRLRLSVAALQGRKRTHFAGAWTSGLGHHEDAVRSGIEAANRIMAGAGAYPVLERAVPLHQPFAPSSAPAANXXXXXXXXXALFEPQPQNVVTF
Sbjct:    1 LPWSVALPSATDNETVIIGTYDYNRSAVNVVEGDQARFTFTHTSVTPEAQRLRLSVAALQGRKRTHFAGAWTSGLGHHEDAVRSGIEAANRIMAGAGAYPVLERAVPLHQPFAPSSAPAANXXXXXXXXXALFEPQPQNVVTF 143
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BLAST of jgi.p|Trimin1|178244 vs. uniprot
Match: A0A1I7KW88_9BURK (Predicted NAD/FAD-binding protein n=3 Tax=unclassified Polaromonas TaxID=2638319 RepID=A0A1I7KW88_9BURK)

HSP 1 Score: 56.2 bits (134), Expect = 1.880e-6
Identity = 28/60 (46.67%), Postives = 39/60 (65.00%), Query Frame = 0 
Query:   38 FTFTHTSVTPEAQRLRLSVAALQGRKRTHFAGAWTSGLGHHEDAVRSGIEAANRIMAGAG 97
            F + H      A R +  V ALQG++ T+F GAWT G G HED ++SG++AAN ++ GAG
Sbjct:  379 FDYAHPVFDLAAIRAQRDVPALQGQRHTYFCGAWT-GYGFHEDGLKSGLQAANLLLQGAG 437
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|178244 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A835Z6X7_9STRA3.290e-88100.00Amino_oxidase domain-containing protein n=1 Tax=Tr... [more]
A0A1I7KW88_9BURK1.880e-646.67Predicted NAD/FAD-binding protein n=3 Tax=unclassi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002937Amine oxidasePFAMPF01593Amino_oxidasecoord: 37..93
e-value: 3.8E-7
score: 29.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_167contigContig_167:201864..202295 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|178244mRNA_16951Tribonema minus UTEX_B_3156 mRNAContig_167 201864..202295 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|178244|e_gw1.167.22.1 ID=Trimin1|178244|e_gw1.167.22.1|Name=jgi.p|Trimin1|178244|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=144bp
LPWSVALPSATDNETVIIGTYDYNRSAVNVVEGDQARFTFTHTSVTPEAQ
RLRLSVAALQGRKRTHFAGAWTSGLGHHEDAVRSGIEAANRIMAGAGAYP
VLERAVPLHQPFAPSSAPAANAATAAAAAAALFEPQPQNVVTF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002937Amino_oxidase