Trimin1|178142|e_gw1.166.7.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|178142
Unique NameTrimin1|178142|e_gw1.166.7.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length477
Homology
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BLAST of jgi.p|Trimin1|178142 vs. uniprot
Match: A0A835Z9U5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9U5_9STRA)

HSP 1 Score: 247 bits (630), Expect = 7.320e-73
Identity = 476/476 (100.00%), Postives = 476/476 (100.00%), Query Frame = 0 
Query:    1 MRVDESDLSSVSALSLGSSTTHAQGGELTAAPNAALALPTESLRPSLSIRKLALLTELKLHRCNTLTGLPDSIGELTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRVSGRCLRSLPDSICGMPALQWLCISSSPSMARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRLQGLQVGDGLAGLXXXXXGLAALTTLNLQRCGFXXXXXXXXXXXXXXXXEAWLCQRLTRLLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTALSVCEMSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPLLSIINDAARESCYFFRYRDT 476
            MRVDESDLSSVSALSLGSSTTHAQGGELTAAPNAALALPTESLRPSLSIRKLALLTELKLHRCNTLTGLPDSIGELTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRVSGRCLRSLPDSICGMPALQWLCISSSPSMARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRLQGLQVGDGLAGLXXXXXGLAALTTLNLQRCGFXXXXXXXXXXXXXXXXEAWLCQRLTRLLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTALSVCEMSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPLLSIINDAARESCYFFRYRDT
Sbjct:    1 MRVDESDLSSVSALSLGSSTTHAQGGELTAAPNAALALPTESLRPSLSIRKLALLTELKLHRCNTLTGLPDSIGELTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRVSGRCLRSLPDSICGMPALQWLCISSSPSMARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRLQGLQVGDGLAGLXXXXXGLAALTTLNLQRCGFXXXXXXXXXXXXXXXXEAWLCQRLTRLLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTALSVCEMSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPLLSIINDAARESCYFFRYRDT 476
[Close]
BLAST of jgi.p|Trimin1|178142 vs. uniprot
Match: A0A836CLJ6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLJ6_9STRA)

HSP 1 Score: 117 bits (293), Expect = 7.150e-25
Identity = 66/72 (91.67%), Postives = 68/72 (94.44%), Query Frame = 0 
Query:    1 MRVDESDLSSVSALSLGSSTTHAQGGELTAAPNAALALPTESLRPSLSIRKLALLTELKLHRCNTLTGLPDS 72
            MRVDESDLSSVSALSLGSSTTHAQG ELTAAP+AALALPTES RPSLSI KLALLTELK+H CNTLTGLPDS
Sbjct:    1 MRVDESDLSSVSALSLGSSTTHAQGRELTAAPHAALALPTESPRPSLSIGKLALLTELKVHSCNTLTGLPDS 72
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|178142 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A835Z9U5_9STRA7.320e-73100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CLJ6_9STRA7.150e-2591.67Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 52..76
e-value: 160.0
score: 3.5
coord: 336..360
e-value: 200.0
score: 2.5
coord: 431..454
e-value: 80.0
score: 5.9
coord: 196..219
e-value: 44.0
score: 8.0
coord: 289..312
e-value: 10.0
score: 13.2
coord: 124..148
e-value: 140.0
score: 4.0
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 277..462
e-value: 4.6E-37
score: 129.1
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 8..276
e-value: 2.0E-47
score: 163.3
NoneNo IPR availablePANTHERPTHR16083LEUCINE RICH REPEAT CONTAINING PROTEINcoord: 117..229
NoneNo IPR availablePANTHERPTHR16083LEUCINE RICH REPEAT CONTAINING PROTEINcoord: 140..262
coord: 258..371
coord: 221..306
NoneNo IPR availablePANTHERPTHR16083:SF25SUBFAMILY NOT NAMEDcoord: 140..262
coord: 258..371
coord: 221..306
NoneNo IPR availablePANTHERPTHR16083:SF25SUBFAMILY NOT NAMEDcoord: 117..229
NoneNo IPR availablePANTHERPTHR16083:SF25SUBFAMILY NOT NAMEDcoord: 353..458
NoneNo IPR availablePANTHERPTHR16083LEUCINE RICH REPEAT CONTAINING PROTEINcoord: 353..458
coord: 48..160
NoneNo IPR availablePANTHERPTHR16083:SF25SUBFAMILY NOT NAMEDcoord: 48..160
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 163..460
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 48..205

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_166contigContig_166:326359..327789 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|178142mRNA_13345Tribonema minus UTEX_B_3156 mRNAContig_166 326359..327789 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|178142|e_gw1.166.7.1 ID=Trimin1|178142|e_gw1.166.7.1|Name=jgi.p|Trimin1|178142|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=477bp
MRVDESDLSSVSALSLGSSTTHAQGGELTAAPNAALALPTESLRPSLSIR
KLALLTELKLHRCNTLTGLPDSIGELTSLRTLAVLNCASLRSLPESIGDL
AALTTLNLGDCLQLSGLPQRIGDLTALSILDLAFCRALQRLPDRIGDLAA
LTALDVNFCAELAELPERIGDLAALTVLNMHSCDALVTIPAQIGKLAALT
SLRVSGRCLRSLPDSICGMPALQWLCISSSPSMARLPHRIGDLPALEHLD
VHLHDSMESLPSSIGALSRLQGLQVGDGLAGLPDSIGGLAALTTLNLQRC
GFAALPESIGALAALTRLEAWLCQRLTRLLDSIGSLTALRTLALYHCRAL
TCLPNTIGGLLALRSLCLQGCVALACLPDAIGALQALTALSVCEMSLTAL
PDSVSDLRALRELDVSWCERMVTLPDRISNLAALKKLDISKSGIHGVPEG
VGELPLLSIINDAARESCYFFRYRDT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR032675LRR_dom_sf