Trimin1|177608|e_gw1.155.18.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|177608
Unique NameTrimin1|177608|e_gw1.155.18.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length261
Homology
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BLAST of jgi.p|Trimin1|177608 vs. uniprot
Match: A0A836CKM6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKM6_9STRA)

HSP 1 Score: 253 bits (647), Expect = 3.360e-81
Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0 
Query:    1 MSRNIFERIGDFTGLTVLDLNHYRLRTLSLLPESIGNLAALETLGLSEWKAIARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLRCCNTRVATLSEQCIGGLASLSKFSWGGKPENAAAIQVPRGIGKLQALTALSLHSSRLTRLPDGICDLEALKLLDLCCCHAL 198
            MSRNIFERIGDFTGLTVLDLNHYRLRTLSLLPESIGNLAALETLGLSEWKAIARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLRCCNTRVATLSEQCIGGLASLSKFSWGGKPENAAAIQVPRGIGKLQALTALSLHSSRLTRLPDGICDLEALKLLDLCCCHAL
Sbjct:    1 MSRNIFERIGDFTGLTVLDLNHYRLRTLSLLPESIGNLAALETLGLSEWKAIARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLRCCNTRVATLSEQCIGGLASLSKFSWGGKPENAAAIQVPRGIGKLQALTALSLHSSRLTRLPDGICDLEALKLLDLCCCHAL 198
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BLAST of jgi.p|Trimin1|177608 vs. uniprot
Match: A0A835ZCG3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCG3_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 5.890e-11
Identity = 34/54 (62.96%), Postives = 41/54 (75.93%), Query Frame = 0 
Query:    1 MSRNIFERIGDFTGLTVLDLNHYRLRTLSLLPESIGNLAALETLGLSEWKAIAR 54
            MSRN+F RIGDFTGLTVLDL+H+ +R    LPE+I N+  LETL L +W AI R
Sbjct:  466 MSRNVFARIGDFTGLTVLDLSHFSVRNTPHLPEAICNIMGLETLRLKDWAAITR 519
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BLAST of jgi.p|Trimin1|177608 vs. uniprot
Match: A0A835ZG33_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG33_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 4.120e-8
Identity = 104/148 (70.27%), Postives = 114/148 (77.03%), Query Frame = 0 
Query:   28 LSLLPESIGNLAALETLGLSEWKAIARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLRCCNTRVATLS--EQCIGGLASLSKFSWGGKPENAAAIQVPRGIGKLQALTALSLHSSR 173
            + LLPESIGNL ALETL L  W+A+   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       C  T +ATLS  E C+GGLA+L+  SWG   E A A++VPR IG LQALT L +  SR
Sbjct:    1 MPLLPESIGNLIALETLKLQGWQALTHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARLRTSICWQTGIATLSDSEHCLGGLAALTDLSWG-THELADAVRVPRSIGALQALTKLHITCSR 147
[Close]
BLAST of jgi.p|Trimin1|177608 vs. uniprot
Match: A0A836CND2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CND2_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 2.630e-7
Identity = 100/149 (67.11%), Postives = 111/149 (74.50%), Query Frame = 0 
Query:   28 LSLLPESIGNLAALETLGLSEWKAIARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLRCCNTRVATLS--EQCIGGLASLSKFSWGGKPENAAAIQVPRGIGKLQALTALSLHSSRL 174
            + LLPESIGNL ALETL L  W+A+   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          C  T +ATLS  E C+ GLA+L+  SWG + E A A+ VPR IG  +ALT LS+  SRL
Sbjct:    1 MPLLPESIGNLIALETLKLQGWQALTHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGLARLRTFICWQTGLATLSASEHCLRGLAALTDLSWGTR-EPADAVSVPRSIGAFRALTKLSITCSRL 148
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|177608 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A836CKM6_9STRA3.360e-81100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZCG3_9STRA5.890e-1162.96Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZG33_9STRA4.120e-870.27Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CND2_9STRA2.630e-767.11Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 147..260
e-value: 2.7E-26
score: 93.8
coord: 2..145
e-value: 8.6E-27
score: 95.5
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 186..245
e-value: 5.7E-8
score: 32.4
NoneNo IPR availablePANTHERPTHR16083LEUCINE RICH REPEAT CONTAINING PROTEINcoord: 154..254
coord: 7..140
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 9..251

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_155contigContig_155:35315..36097 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|177608mRNA_15826Tribonema minus UTEX_B_3156 mRNAContig_155 35315..36097 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|177608|e_gw1.155.18.1 ID=Trimin1|177608|e_gw1.155.18.1|Name=jgi.p|Trimin1|177608|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=261bp
MSRNIFERIGDFTGLTVLDLNHYRLRTLSLLPESIGNLAALETLGLSEWK
AIARLPDSIVKLRRLRTLDLAACEALTMLPERIEDLASLTILNLNYCKQL
AGLPDSFYNLTKLTNLRCCNTRVATLSEQCIGGLASLSKFSWGGKPENAA
AIQVPRGIGKLQALTALSLHSSRLTRLPDGICDLEALKLLDLCCCHALTH
LPARIGELQALTYLDLSQCYALSSLPDSIVHLRALRHVDLDQCRLLANIP
QSIQKVAQEH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt