Trimin1|176861|e_gw1.143.111.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|176861
Unique NameTrimin1|176861|e_gw1.143.111.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length165
Homology
BLAST of jgi.p|Trimin1|176861 vs. uniprot
Match: A0A836CL79_9STRA (ABC-2 family transporter protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL79_9STRA)

HSP 1 Score: 330 bits (847), Expect = 1.140e-114
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0
Query:    1 SYHGLPGWLGQLTELKYRTCLNNEQASYTARTHPLPVTAQESIETQTILSVLACLFIIIPLCYAPAAFVTFVVRERATKSKRLQLMSGASPLSYWLATYLWDVTLFMVLAAACMGCLYTYGQHAARCFVELSESAGAMALLFVLYGFSVLPLCYLYTFMFDNHR 164
            SYHGLPGWLGQLTELKYRTCLNNEQASYTARTHPLPVTAQESIETQTILSVLACLFIIIPLCYAPAAFVTFVVRERATKSKRLQLMSGASPLSYWLATYLWDVTLFMVLAAACMGCLYTYGQHAARCFVELSESAGAMALLFVLYGFSVLPLCYLYTFMFDNHR
Sbjct:    1 SYHGLPGWLGQLTELKYRTCLNNEQASYTARTHPLPVTAQESIETQTILSVLACLFIIIPLCYAPAAFVTFVVRERATKSKRLQLMSGASPLSYWLATYLWDVTLFMVLAAACMGCLYTYGQHAARCFVELSESAGAMALLFVLYGFSVLPLCYLYTFMFDNHR 164          
BLAST of jgi.p|Trimin1|176861 vs. uniprot
Match: D7G7Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7Z8_ECTSI)

HSP 1 Score: 170 bits (430), Expect = 7.660e-46
Identity = 89/165 (53.94%), Postives = 112/165 (67.88%), Query Frame = 0
Query:    3 HGLPGWLGQLTELKYRTCLNNE-----QASYTARTHPLPVTAQESIETQTILSVLACLFIIIPLCYAPAAFVTFVVRERATKSKRLQLMSGASPLSYWLATYLWDVTLFMVLAAACMGCLYTYGQHAARCFVELSESAGAMALLFVLYGFSVLPLCYLYTFMFDN 162
            H LP W+G+LT   ++ C  N      QASYT R+HPLP+TA ES+E QT+LS+L  L + IPLCYAPAAFVTF+VRERA KSKR+QL+SGASPL+YW +TYLWD  LF VL    M     YG+ A++ F+   ++      L + YG S LPL YLY+F FD 
Sbjct: 1417 HALPAWVGELTARTFQACATNRGLEGGQASYTVRSHPLPLTATESLEVQTMLSLLVSLLVTIPLCYAPAAFVTFLVRERACKSKRVQLVSGASPLAYWASTYLWDALLFFVLTVLVMLTFAAYGKDASKVFMMRWDALLGTWGLLLSYGLSSLPLSYLYSFAFDG 1581          
BLAST of jgi.p|Trimin1|176861 vs. uniprot
Match: A0A482RV75_9ARCH (ATP-binding cassette domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RV75_9ARCH)

HSP 1 Score: 163 bits (412), Expect = 1.850e-43
Identity = 81/163 (49.69%), Postives = 109/163 (66.87%), Query Frame = 0
Query:    1 SYHGLPGWLGQLTELKYRTCLNNEQASYTARTHPLPVTAQESIETQTILSVLACLFIIIPLCYAPAAFVTFVVRERATKSKRLQLMSGASPLSYWLATYLWDVTLFMVLAAACMGCLYTYGQHAARCFVELSESAGAMALLFVLYGFSVLPLCYLYTFMFDNH 163
            S H +  W G+L E  ++TC NN  A Y  + HPLP+T QES+  + ILSVL  +FI++PLCY PAAFV+F+VRER TK K LQ+ SG SP  YW+ TYLWD+TLF +LA   +   Y  G+ ++  FV  +ES  A+  L ++YG S +PL YLY+F F N+
Sbjct:  574 SPHAVAAWEGELVESAFQTCQNNPDAEYYVKNHPLPLTTQESLTIRVILSVLTSIFILVPLCYIPAAFVSFLVRERVTKCKHLQITSGVSPALYWVGTYLWDMTLFCILAGFILIAFYIVGKSSSSVFVGDAESNLAVLCLVLVYGASAIPLNYLYSFGFSNY 736          
BLAST of jgi.p|Trimin1|176861 vs. uniprot
Match: A0A482RS57_9ARCH (ATP-binding cassette domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RS57_9ARCH)

HSP 1 Score: 141 bits (355), Expect = 8.730e-36
Identity = 69/162 (42.59%), Postives = 100/162 (61.73%), Query Frame = 0
Query:    1 SYHGLPGWLGQLTELKYRTCLNNEQASYTARTHPLPVTAQESIETQTILSVLACLFIIIPLCYAPAAFVTFVVRERATKSKRLQLMSGASPLSYWLATYLWDVTLFMVLAAACMGCLYTYGQHAARCFVELSESAGAMALLFVLYGFSVLPLCYLYTFMFDN 162
            S H +  W G+L +  ++TC  N  ASY    HP+P T    ++ +  LS+L  +FI++PL  +PA++V FVV+E+ATK   LQ+ SG SP  YWL+TY WD+T F+VLA   +   +  G   A  FV  SE++  + LL + YG S +PL Y+Y+F FDN
Sbjct:  512 SPHAIAAWQGELVQQVFQTCTGNPTASYIVHNHPIPQTRSTLLKNRVFLSLLTSIFILVPLSQSPASYVAFVVKEKATKCTHLQMASGVSPSIYWLSTYFWDMTSFIVLALCVLVAFFVVGPGNASVFVGTSETSTCVLLLILSYGASAIPLNYIYSFAFDN 673          
BLAST of jgi.p|Trimin1|176861 vs. uniprot
Match: A0A7S3DQC5_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DQC5_9STRA)

HSP 1 Score: 139 bits (350), Expect = 4.290e-35
Identity = 71/163 (43.56%), Postives = 101/163 (61.96%), Query Frame = 0
Query:    1 SYHGLPGWLGQLTELKYRTCLNNEQASYTARTHPLPVTAQESIETQTILSVLACLFIIIPLCYAPAAFVTFVVRERATKSKRLQLMSGASPLSYWLATYLWDVTLFMVLAAACMGCLYTYGQHAARCFVELSESAGAMALLFVLYGFSVLPLCYLYTFMFDNH 163
            S H +  +     +  +++C+    A   +  HPLP+T Q+S+E +TILSVLA +FI+IP C+ P AF+ F+VRE+A+KSK LQL+SG +  +YW++ Y +DV+ F +L    M     YG+ AA+ FV   E+ G  ALL   YG SVLP  YL    FDNH
Sbjct:  653 SPHAVATFNQHYADFVFKSCIGKTSARLVSENHPLPLTTQQSLEIKTILSVLASMFILIPYCFIPGAFIVFLVREKASKSKHLQLVSGTNITAYWMSAYFYDVSRFFLLTVLVMAVFLMYGKDAAQVFVGTWEAFGCTALLTFGYGLSVLPFAYLLARRFDNH 815          
BLAST of jgi.p|Trimin1|176861 vs. uniprot
Match: A0A7S1VG15_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VG15_9STRA)

HSP 1 Score: 137 bits (345), Expect = 1.980e-34
Identity = 73/163 (44.79%), Postives = 99/163 (60.74%), Query Frame = 0
Query:    1 SYHGLPGWLGQLTELKYRTCLNNEQASYTARTHPLPVTAQESIETQTILSVLACLFIIIPLCYAPAAFVTFVVRERATKSKRLQLMSGASPLSYWLATYLWDVTLFMVLAAACMGCLYTYGQHAARCFVELSESAGAMALLFVLYGFSVLPLCYLYTFMFDNH 163
            S H    +     E  ++TC  N+ A   +  HPLP+T Q+ IE QT+LS+LA LF++IP CY PAAF  F+V+ER +KSK LQL+SG +  +YWL++YLWD+ L++ L+   M     YG  +A  FV   ES     LL   YG S LP  YL + MF+NH
Sbjct:  388 SPHAAAAFHQTYNEFLFKTCSQNDDARLVSVNHPLPLTTQQEIEVQTVLSILASLFLLIPYCYIPAAFAVFLVKERVSKSKHLQLVSGVNLSAYWLSSYLWDLGLWLALSVLIMLIFLMYGTSSAAVFVGDVESFFCTFLLTFGYGLSALPFAYLLSRMFNNH 550          
BLAST of jgi.p|Trimin1|176861 vs. uniprot
Match: A0A0M0J7C4_9EUKA (ATP-binding cassette sub-family a member 3 n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J7C4_9EUKA)

HSP 1 Score: 136 bits (343), Expect = 3.890e-34
Identity = 72/173 (41.62%), Postives = 106/173 (61.27%), Query Frame = 0
Query:    1 SYHGLPGWLGQLTELKYRTC----------LNNEQASYTARTHPLPVTAQESIETQTILSVLACLFIIIPLCYAPAAFVTFVVRERATKSKRLQLMSGASPLSYWLATYLWDVTLFMVLAAACMGCLYTYGQHAARCFVELSESAGAMALLFVLYGFSVLPLCYLYTFMFDNH 163
            S+H LP +L ++T  ++R             +  + SY    HPLP+T  + +  + IL+ LA LF++IP CY PA+   FVV+ERA K+K LQL+SGA P  YWLA+YLWD+TLF   A+ CM   + YG+     +V  S+ A A  L+ + YG SVLP+ Y ++F+F++H
Sbjct: 1791 SWHALPSYLAEVTAARWRQIHGAPPPPTAGSSPAEESYAVYNHPLPLTGTQELTIKLILATLAALFVLIPFCYIPASAAVFVVKERAVKAKHLQLVSGAGPAVYWLASYLWDLTLFTFTASCCMLVFFCYGEPG---YVGNSDQALATYLVLLGYGASVLPMIYCFSFLFESH 1960          
BLAST of jgi.p|Trimin1|176861 vs. uniprot
Match: A0A2D5MS41_9BACT (Uncharacterized protein n=1 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A2D5MS41_9BACT)

HSP 1 Score: 130 bits (327), Expect = 5.410e-32
Identity = 70/167 (41.92%), Postives = 108/167 (64.67%), Query Frame = 0
Query:    1 SYHGLPGWLGQLTELKYR---TCLNNE-QASYTARTHPLPVTAQESIETQTILSVLACLFIIIPLCYAPAAFVTFVVRERATKSKRLQLMSGASPLSYWLATYLWDVTLFMVLAAACMGCLYTYGQHAARCFVELSESAGAMALLFVLYGFSVLPLCYLYTFMFDNH 163
            S H +P +L  L +L Y    T  + E +  +T  +HPLP+T+++ +E +T+LS+ A LFI+IP CY PAAFV FVV+ER+TKSK LQL+SG +  +YW +T+++DV L+++L    M C + YG+ +A  FV  S +     ++ +LYG S +P  Y+ +  F NH
Sbjct: 1109 SPHAVPSFLNSLYQLIYNEECTMPSGESKPKFTVYSHPLPLTSRQVLEVKTVLSLFASLFILIPYCYIPAAFVVFVVKERSTKSKHLQLVSGVTIEAYWFSTFVFDVALYVLLTFIIMLCFFIYGRDSAAVFVGSSSTFWCTLVVTLLYGCSAIPFSYIVSRGFQNH 1275          
BLAST of jgi.p|Trimin1|176861 vs. uniprot
Match: A0A2R6WXZ6_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WXZ6_MARPO)

HSP 1 Score: 127 bits (318), Expect = 8.810e-31
Identity = 68/163 (41.72%), Postives = 95/163 (58.28%), Query Frame = 0
Query:    1 SYHGLPGWLGQLTELKYRTCLNNEQASYTARTHPLPVTAQESIETQTILSVLACLFIIIPLCYAPAAFVTFVVRERATKSKRLQLMSGASPLSYWLATYLWDVTLFMVLAAACMGCLYTYGQHAARCFVELSESAGAMALLFVLYGFSVLPLCYLYTFMFDNH 163
            S H +P  + +L + + R  LN   AS      PLP+T  E++  Q +L+VLA LFI+IP CY  A+F  FVVRER  K+K LQ++SGA+  SYW ATY WD+  ++ +    M     Y   A   F+     AGA+ +L + +G SVLPL Y Y+F F +H
Sbjct: 1289 SEHAMPTLIQELAQARLREALNLSTASMKLSNSPLPLTKNEALRIQVMLTVLAALFILIPFCYLAASFAVFVVRERVVKAKLLQMLSGANTYSYWTATYCWDILNYIAIVGITMLVFVLYRDQA---FIGSWTKAGAVFVLLISFGLSVLPLSYCYSFAFTSH 1448          
BLAST of jgi.p|Trimin1|176861 vs. uniprot
Match: A0A7I4DL55_PHYPA (ABC transporter domain-containing protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4DL55_PHYPA)

HSP 1 Score: 124 bits (310), Expect = 1.010e-29
Identity = 69/163 (42.33%), Postives = 95/163 (58.28%), Query Frame = 0
Query:    1 SYHGLPGWLGQLTELKYRTCLNNEQASYTARTHPLPVTAQESIETQTILSVLACLFIIIPLCYAPAAFVTFVVRERATKSKRLQLMSGASPLSYWLATYLWDVTLFMVLAAACMGCLYTYGQHAARCFVELSESAGAMALLFVLYGFSVLPLCYLYTFMFDNH 163
            S H LP  + +L + + +  L N  A+     HPLP+T  E +E QT+LSVLA LF++IP CY  A++  FVVRER  K+K LQ++SGAS ++YW ATY WD+  +    A  M     Y     + FV     AGA   + + +G SV+PL Y Y+F F NH
Sbjct:  998 SDHSLPALVQELMQTRLKANLVNSSATMKVSNHPLPLTKTEFLEIQTVLSVLAALFVLIPFCYLGASYAVFVVRERVVKAKLLQMVSGASCVAYWTATYTWDLITYAATLALTMLIFELYQD---KSFVGSWSKAGATLSVLMSFGASVIPLTYCYSFGFLNH 1157          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|176861 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CL79_9STRA1.140e-114100.00ABC-2 family transporter protein-domain-containing... [more]
D7G7Z8_ECTSI7.660e-4653.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A482RV75_9ARCH1.850e-4349.69ATP-binding cassette domain-containing protein (Fr... [more]
A0A482RS57_9ARCH8.730e-3642.59ATP-binding cassette domain-containing protein (Fr... [more]
A0A7S3DQC5_9STRA4.290e-3543.56Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A7S1VG15_9STRA1.980e-3444.79Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A0M0J7C4_9EUKA3.890e-3441.62ATP-binding cassette sub-family a member 3 n=1 Tax... [more]
A0A2D5MS41_9BACT5.410e-3241.92Uncharacterized protein n=1 Tax=Verrucomicrobiales... [more]
A0A2R6WXZ6_MARPO8.810e-3141.72Uncharacterized protein n=2 Tax=Marchantia polymor... [more]
A0A7I4DL55_PHYPA1.010e-2942.33ABC transporter domain-containing protein n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF12698ABC2_membrane_3coord: 17..163
e-value: 1.0E-23
score: 84.0
NoneNo IPR availablePANTHERPTHR19229:SF190RETINAL-SPECIFIC ATP-BINDING CASSETTE TRANSPORTERcoord: 27..161
IPR026082ABC transporter APANTHERPTHR19229ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCAcoord: 27..161

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_143contigContig_143:139746..141054 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|176861mRNA_14321Tribonema minus UTEX_B_3156 mRNAContig_143 139746..141054 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|176861|e_gw1.143.111.1 ID=Trimin1|176861|e_gw1.143.111.1|Name=jgi.p|Trimin1|176861|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=165bp
SYHGLPGWLGQLTELKYRTCLNNEQASYTARTHPLPVTAQESIETQTILS
VLACLFIIIPLCYAPAAFVTFVVRERATKSKRLQLMSGASPLSYWLATYL
WDVTLFMVLAAACMGCLYTYGQHAARCFVELSESAGAMALLFVLYGFSVL
PLCYLYTFMFDNHR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026082ABCA