Trimin1|175673|e_gw1.129.122.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|175673
Unique Name	Trimin1\|175673\|e_gw1.129.122.1
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	106

Homology

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BLAST of jgi.p|Trimin1|175673 vs. uniprot
Match: A0A835ZCD4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCD4_9STRA)

HSP 1 Score: 231 bits (588), Expect = 4.570e-77
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0

Query:    1 MINAGCLCLLLQDEDEKLCHLVKEYGAKRWSIIAGRLPGRIGKSCRERWHNHLNPEVRKDAWRPEEDLTIFKHHKELGNQWAEIAKLLPGRTDNAIKNRYYSTMRR 106
            MINAGCLCLLLQDEDEKLCHLVKEYGAKRWSIIAGRLPGRIGKSCRERWHNHLNPEVRKDAWRPEEDLTIFKHHKELGNQWAEIAKLLPGRTDNAIKNRYYSTMRR
Sbjct:    1 MINAGCLCLLLQDEDEKLCHLVKEYGAKRWSIIAGRLPGRIGKSCRERWHNHLNPEVRKDAWRPEEDLTIFKHHKELGNQWAEIAKLLPGRTDNAIKNRYYSTMRR 106

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BLAST of jgi.p|Trimin1|175673 vs. uniprot
Match: A0A2D4CCM8_PYTIN (Myb-like DNA-binding protein, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CCM8_PYTIN)

HSP 1 Score: 164 bits (416), Expect = 7.050e-48
Identity = 74/104 (71.15%), Postives = 85/104 (81.73%), Query Frame = 0

Query:    3 NAGCLCLLLQDEDEKLCHLVKEYGAKRWSIIAGRLPGRIGKSCRERWHNHLNPEVRKDAWRPEEDLTIFKHHKELGNQWAEIAKLLPGRTDNAIKNRYYSTMRR 106
            +  C     ++E+EKL  LVK+YGAKRWS+IA  LPGR+GK CRERWHNHLNP VRKDAW  EED  IF+ HK +GNQWAEI+K+LPGRTDNAIKNRYYSTMRR
Sbjct:  115 DTNCKRPWTREENEKLVQLVKQYGAKRWSLIAMHLPGRVGKQCRERWHNHLNPNVRKDAWTAEEDYVIFECHKNVGNQWAEISKMLPGRTDNAIKNRYYSTMRR 218

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BLAST of jgi.p|Trimin1|175673 vs. uniprot
Match: A0A1V9ZY42_9STRA (Myb-like DNA-binding protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZY42_9STRA)

HSP 1 Score: 164 bits (414), Expect = 6.980e-47
Identity = 73/95 (76.84%), Postives = 83/95 (87.37%), Query Frame = 0

Query:   12 QDEDEKLCHLVKEYGAKRWSIIAGRLPGRIGKSCRERWHNHLNPEVRKDAWRPEEDLTIFKHHKELGNQWAEIAKLLPGRTDNAIKNRYYSTMRR 106
            ++E+EKL  LVK+YGAKRWS+IA  LPGR+GK CRERWHNHLNP VRKDAW  EED  IF+ HK +GNQWAEI+K+LPGRTDNAIKNRYYSTMRR
Sbjct:  107 REENEKLMQLVKQYGAKRWSLIAMHLPGRVGKQCRERWHNHLNPAVRKDAWTAEEDYVIFECHKNVGNQWAEISKMLPGRTDNAIKNRYYSTMRR 201

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BLAST of jgi.p|Trimin1|175673 vs. uniprot
Match: A0A1V9Z4Y9_9STRA (Myb-like DNA-binding protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z4Y9_9STRA)

HSP 1 Score: 164 bits (414), Expect = 7.270e-47
Identity = 73/95 (76.84%), Postives = 83/95 (87.37%), Query Frame = 0

Query:   12 QDEDEKLCHLVKEYGAKRWSIIAGRLPGRIGKSCRERWHNHLNPEVRKDAWRPEEDLTIFKHHKELGNQWAEIAKLLPGRTDNAIKNRYYSTMRR 106
            ++E+EKL  LVK+YGAKRWS+IA  LPGR+GK CRERWHNHLNP VRKDAW  EED  IF+ HK +GNQWAEI+K+LPGRTDNAIKNRYYSTMRR
Sbjct:  112 REENEKLMQLVKQYGAKRWSLIAMHLPGRVGKQCRERWHNHLNPAVRKDAWTAEEDYVIFECHKNVGNQWAEISKMLPGRTDNAIKNRYYSTMRR 206

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BLAST of jgi.p|Trimin1|175673 vs. uniprot
Match: A0A2P4Y2W3_9STRA (R2R3 Myb protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y2W3_9STRA)

HSP 1 Score: 162 bits (409), Expect = 1.020e-46
Identity = 72/95 (75.79%), Postives = 83/95 (87.37%), Query Frame = 0

Query:   12 QDEDEKLCHLVKEYGAKRWSIIAGRLPGRIGKSCRERWHNHLNPEVRKDAWRPEEDLTIFKHHKELGNQWAEIAKLLPGRTDNAIKNRYYSTMRR 106
            ++E++KL  LVK+YGAKRWS+IA  LPGR+GK CRERWHNHLNP VRKDAW  EED  IF+ HK +GNQWAEI+K+LPGRTDNAIKNRYYSTMRR
Sbjct:   54 REENDKLMQLVKQYGAKRWSLIAMHLPGRVGKQCRERWHNHLNPLVRKDAWTAEEDYVIFECHKNVGNQWAEISKMLPGRTDNAIKNRYYSTMRR 148

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BLAST of jgi.p|Trimin1|175673 vs. uniprot
Match: T0QU24_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QU24_SAPDV)

HSP 1 Score: 164 bits (414), Expect = 1.030e-46
Identity = 73/95 (76.84%), Postives = 83/95 (87.37%), Query Frame = 0

Query:   12 QDEDEKLCHLVKEYGAKRWSIIAGRLPGRIGKSCRERWHNHLNPEVRKDAWRPEEDLTIFKHHKELGNQWAEIAKLLPGRTDNAIKNRYYSTMRR 106
            ++E+EKL  LVK+YGAKRWS+IA  LPGR+GK CRERWHNHLNP VRKDAW  EED  IF+ HK +GNQWAEI+K+LPGRTDNAIKNRYYSTMRR
Sbjct:  114 REENEKLMQLVKQYGAKRWSLIAMHLPGRVGKQCRERWHNHLNPAVRKDAWTAEEDYVIFECHKNVGNQWAEISKMLPGRTDNAIKNRYYSTMRR 208

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BLAST of jgi.p|Trimin1|175673 vs. uniprot
Match: A0A5D6XWB8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XWB8_9STRA)

HSP 1 Score: 165 bits (418), Expect = 1.520e-46
Identity = 74/95 (77.89%), Postives = 83/95 (87.37%), Query Frame = 0

Query:   12 QDEDEKLCHLVKEYGAKRWSIIAGRLPGRIGKSCRERWHNHLNPEVRKDAWRPEEDLTIFKHHKELGNQWAEIAKLLPGRTDNAIKNRYYSTMRR 106
            ++E+EKL  LVK+YGAKRWS+IA  LPGR+GK CRERWHNHLNP VRKDAW  EED  IF+ HK +GNQWAEIAK+LPGRTDNAIKNRYYSTMRR
Sbjct:  116 REENEKLMQLVKQYGAKRWSLIAMHLPGRVGKQCRERWHNHLNPSVRKDAWTTEEDYVIFECHKNVGNQWAEIAKMLPGRTDNAIKNRYYSTMRR 210

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BLAST of jgi.p|Trimin1|175673 vs. uniprot
Match: A0A8K1FNJ7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FNJ7_PYTOL)

HSP 1 Score: 165 bits (417), Expect = 2.330e-46
Identity = 74/104 (71.15%), Postives = 86/104 (82.69%), Query Frame = 0

Query:    3 NAGCLCLLLQDEDEKLCHLVKEYGAKRWSIIAGRLPGRIGKSCRERWHNHLNPEVRKDAWRPEEDLTIFKHHKELGNQWAEIAKLLPGRTDNAIKNRYYSTMRR 106
            ++ C     ++E+EKL  LVK+YGAKRWS+IA  LPGR+GK CRERWHNHLNP VRKDAW  EED  IF+ HK +GNQWAEI+K+LPGRTDNAIKNRYYSTMRR
Sbjct:   86 DSNCKRPWTREENEKLIQLVKQYGAKRWSLIAMHLPGRVGKQCRERWHNHLNPNVRKDAWTAEEDYVIFECHKNVGNQWAEISKMLPGRTDNAIKNRYYSTMRR 189

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BLAST of jgi.p|Trimin1|175673 vs. uniprot
Match: A0A397B822_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397B822_9STRA)

HSP 1 Score: 160 bits (406), Expect = 2.750e-46
Identity = 72/92 (78.26%), Postives = 80/92 (86.96%), Query Frame = 0

Query:   15 DEKLCHLVKEYGAKRWSIIAGRLPGRIGKSCRERWHNHLNPEVRKDAWRPEEDLTIFKHHKELGNQWAEIAKLLPGRTDNAIKNRYYSTMRR 106
            +EKL  LVK+YGAKRWS+IA  LPGR+GK CRERWHNHLNP VRKDAW  EED  IF+ HK +GNQWAEI+K+LPGRTDNAIKNRYYSTMRR
Sbjct:   91 NEKLMQLVKQYGAKRWSLIAMHLPGRVGKQCRERWHNHLNPAVRKDAWTAEEDYVIFECHKNVGNQWAEISKMLPGRTDNAIKNRYYSTMRR 182

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BLAST of jgi.p|Trimin1|175673 vs. uniprot
Match: A0A3M6VLP0_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VLP0_9STRA)

HSP 1 Score: 164 bits (415), Expect = 2.760e-46
Identity = 73/95 (76.84%), Postives = 83/95 (87.37%), Query Frame = 0

Query:   12 QDEDEKLCHLVKEYGAKRWSIIAGRLPGRIGKSCRERWHNHLNPEVRKDAWRPEEDLTIFKHHKELGNQWAEIAKLLPGRTDNAIKNRYYSTMRR 106
            ++E+EKL  LVK+YGAKRWS+IA  LPGR+GK CRERWHNHLNP VRKDAW  EED  IF+ HK +GNQWAEI+K+LPGRTDNAIKNRYYSTMRR
Sbjct:   92 REENEKLIQLVKQYGAKRWSLIAMHLPGRVGKQCRERWHNHLNPSVRKDAWTAEEDYVIFECHKNVGNQWAEISKMLPGRTDNAIKNRYYSTMRR 186

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|175673 vs. uniprot

BLAST of jgi.p|Trimin1|175673 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835ZCD4_9STRA	4.570e-77	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A2D4CCM8_PYTIN	7.050e-48	71.15	Myb-like DNA-binding protein, putative n=1 Tax=Pyt...	[more]
A0A1V9ZY42_9STRA	6.980e-47	76.84	Myb-like DNA-binding protein n=1 Tax=Thraustotheca...	[more]
A0A1V9Z4Y9_9STRA	7.270e-47	76.84	Myb-like DNA-binding protein n=1 Tax=Achlya hypogy...	[more]
A0A2P4Y2W3_9STRA	1.020e-46	75.79	R2R3 Myb protein (Fragment) n=1 Tax=Phytophthora p...	[more]
T0QU24_SAPDV	1.030e-46	76.84	Uncharacterized protein n=2 Tax=Saprolegnia TaxID=...	[more]
A0A5D6XWB8_9STRA	1.520e-46	77.89	Uncharacterized protein n=1 Tax=Pythium brassicum ...	[more]
A0A8K1FNJ7_PYTOL	2.330e-46	71.15	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
A0A397B822_9STRA	2.750e-46	78.26	Uncharacterized protein n=2 Tax=Aphanomyces astaci...	[more]
A0A3M6VLP0_9STRA	2.760e-46	76.84	Uncharacterized protein n=2 Tax=Peronospora effusa...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 6..55 e-value: 3.0E-10 score: 50.0 coord: 58..106 e-value: 2.1E-14 score: 63.9
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 54..104 score: 10.034522
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 12..53 score: 9.97646
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 12..53 e-value: 8.4116E-12 score: 53.3482
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 61..101 e-value: 2.59744E-10 score: 49.4962
None	No IPR available	GENE3D	1.10.10.60		coord: 61..105 e-value: 4.9E-18 score: 66.8
None	No IPR available	GENE3D	1.10.10.60		coord: 11..58 e-value: 1.0E-19 score: 72.3
None	No IPR available	PANTHER	PTHR45614	MYB PROTEIN-RELATED	coord: 12..106
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 12..53 e-value: 2.0E-13 score: 50.3 coord: 59..102 e-value: 1.4E-14 score: 54.0
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 12..57 score: 23.712641
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 58..106 score: 20.192795
IPR028311	Myb-related protein B	PANTHER	PTHR45614:SF30	MYB-RELATED PROTEIN B	coord: 12..106
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 33..105

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_129	contig	Contig_129:265993..266445 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|175673	mRNA_9858	Tribonema minus UTEX_B_3156	mRNA	Contig_129 265993..266445 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|175673|e_gw1.129.122.1 ID=Trimin1|175673|e_gw1.129.122.1|Name=jgi.p|Trimin1|175673|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=106bp
MINAGCLCLLLQDEDEKLCHLVKEYGAKRWSIIAGRLPGRIGKSCRERWH
NHLNPEVRKDAWRPEEDLTIFKHHKELGNQWAEIAKLLPGRTDNAIKNRY
YSTMRR

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001005	SANT/Myb
IPR017930	Myb_dom
IPR028311	MYBL2
IPR009057	Homeobox-like_sf