Trimin1|175579|e_gw1.127.71.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|175579
Unique NameTrimin1|175579|e_gw1.127.71.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length126
Homology
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|175579 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006970PT repeatPFAMPF04886PTcoord: 22..56
e-value: 1.8E-6
score: 27.4
coord: 58..92
e-value: 2.2E-7
score: 30.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..39
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..125
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..125

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_127contigContig_127:20170..21897 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|175579mRNA_14838Tribonema minus UTEX_B_3156 mRNAContig_127 20170..21897 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|175579|e_gw1.127.71.1 ID=Trimin1|175579|e_gw1.127.71.1|Name=jgi.p|Trimin1|175579|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=126bp
QPTQTPTGLPTATPTGKPTRRPTRTPTAIPTPEPTRNPTAEPTGQPSLSP
TAEPTALPTAEPTGTPTTQPTGTPTLQPTGTPTAKPTRKPTTSKPAQQPT
ATPTAMPTAEPTTSQVQSTFDAWGA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006970PT