Trimin1|175564|e_gw1.127.28.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|175564
Unique NameTrimin1|175564|e_gw1.127.28.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length973
Homology
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BLAST of jgi.p|Trimin1|175564 vs. uniprot
Match: A0A836CMA4_9STRA (Tfp pilus assembly protein PilF n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMA4_9STRA)

HSP 1 Score: 205 bits (521), Expect = 8.330e-51
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0 
Query:    1 MALLSAELPNVRRLLAYIDSEDGACHLRDESWAAKLVELAYELQDRSVLREAELLFWHALDITDGLQVVGAQHASNATTLNGLAGLLXXXXXXXXXXXMYRRALAIREETLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTDTLAASLLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFQHPDTAVSLN 209
            MALLSAELPNVRRLLAYIDSEDGACHLRDESWAAKLVELAYELQDRSVLREAELLFWHALDITDGLQVVGAQHASNATTLNGLAGLLXXXXXXXXXXXMYRRALAIREETLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTDTLAASLLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFQHPDTAVSLN
Sbjct:    1 MALLSAELPNVRRLLAYIDSEDGACHLRDESWAAKLVELAYELQDRSVLREAELLFWHALDITDGLQVVGAQHASNATTLNGLAGLLXXXXXXXXXXXMYRRALAIREETLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTDTLAASLLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFQHPDTAVSLN 209
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BLAST of jgi.p|Trimin1|175564 vs. uniprot
Match: A0A836C983_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C983_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 7.480e-8
Identity = 42/84 (50.00%), Postives = 54/84 (64.29%), Query Frame = 0 
Query:    1 MALLSAELPNVRRLLAYIDSEDGACHLRDESWAAKLVELAYELQDRSVLREAELLFWHALDITDGLQVVGAQHASNATTLNGLA 84
            MALLSAELPN+RRLL ++D+E      + ESWA KL  L  EL+  SVL E E LF  AL + +  + + A+H + AT LN LA
Sbjct:  579 MALLSAELPNIRRLLMFLDNEAS---WQGESWAIKLANLGDELRALSVLMETEALFRRALALEE--RALDARHPAMATLLNKLA 657
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BLAST of jgi.p|Trimin1|175564 vs. uniprot
Match: A0A835YTN6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTN6_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 1.220e-5
Identity = 36/69 (52.17%), Postives = 44/69 (63.77%), Query Frame = 0 
Query:   18 IDSEDGACHLRDESWAAKLVELAYELQDRSVLREAELLFWHALDITDGLQVVGAQHASNATTLNGLAGL 86
            +DSE+     +DESWA+K  +L YEL  RSVLREAE L   AL I    QV+G +H   AT+LN LA L
Sbjct:    1 MDSEES---WQDESWASKCSKLGYELNARSVLREAESLHRRALAIRQ--QVLGTEHLDTATSLNNLASL 64
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|175564 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A836CMA4_9STRA8.330e-51100.00Tfp pilus assembly protein PilF n=1 Tax=Tribonema ... [more]
A0A836C983_9STRA7.480e-850.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YTN6_9STRA1.220e-552.17Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002151Kinesin light chainPRINTSPR00381KINESINLIGHTcoord: 744..763
score: 38.0
coord: 766..784
score: 35.79
coord: 875..895
score: 49.52
coord: 831..848
score: 44.44
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 709..742
e-value: 1.2
score: 18.1
coord: 625..658
e-value: 0.13
score: 21.4
coord: 373..406
e-value: 34.0
score: 10.3
coord: 119..152
e-value: 10.0
score: 15.0
coord: 77..110
e-value: 0.55
score: 19.3
coord: 289..322
e-value: 46.0
score: 9.1
coord: 541..574
e-value: 0.11
score: 21.7
coord: 457..490
e-value: 3.1
score: 16.8
coord: 331..364
e-value: 0.79
score: 18.8
coord: 793..826
e-value: 0.48
score: 19.5
coord: 247..280
e-value: 150.0
score: 4.6
coord: 205..238
e-value: 0.074
score: 22.2
coord: 877..910
e-value: 0.0018
score: 27.5
coord: 583..616
e-value: 0.064
score: 22.4
coord: 499..532
e-value: 1.5
score: 17.8
coord: 835..868
e-value: 0.3
score: 20.2
coord: 667..700
e-value: 0.083
score: 22.0
coord: 751..784
e-value: 0.11
score: 21.6
coord: 415..448
e-value: 16.0
score: 13.2
coord: 163..196
e-value: 47.0
score: 9.0
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 877..910
score: 8.2309
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 541..574
score: 8.2014
NoneNo IPR availablePFAMPF13424TPR_12coord: 203..279
e-value: 8.6E-16
score: 58.0
coord: 665..741
e-value: 8.4E-19
score: 67.7
coord: 581..657
e-value: 1.2E-19
score: 70.4
coord: 329..405
e-value: 2.5E-17
score: 62.9
coord: 77..151
e-value: 6.1E-18
score: 64.9
coord: 431..489
e-value: 1.7E-11
score: 44.2
coord: 497..573
e-value: 6.0E-17
score: 61.7
coord: 834..908
e-value: 1.4E-20
score: 73.3
NoneNo IPR availablePFAMPF13374TPR_10coord: 792..833
e-value: 6.3E-12
score: 44.9
coord: 750..790
e-value: 9.9E-10
score: 38.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 933..957
NoneNo IPR availablePANTHERPTHR45783KINESIN LIGHT CHAINcoord: 230..316
coord: 250..370
coord: 162..254
coord: 694..786
coord: 776..877
coord: 364..456
coord: 427..548
coord: 524..625
coord: 609..706
coord: 34..158
coord: 823..927
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 313..482
e-value: 6.8E-61
score: 207.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 756..952
e-value: 9.1E-64
score: 216.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 665..755
e-value: 3.6E-22
score: 81.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 161..303
e-value: 4.5E-47
score: 162.5
coord: 487..651
e-value: 3.3E-62
score: 212.2
coord: 7..160
e-value: 4.3E-30
score: 106.7
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 201..321
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 367..489
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 535..687
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 661..782
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 32..148
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 453..573
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 789..926

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_127contigContig_127:298445..301363 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|175564mRNA_14866Tribonema minus UTEX_B_3156 mRNAContig_127 298445..301363 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|175564|e_gw1.127.28.1 ID=Trimin1|175564|e_gw1.127.28.1|Name=jgi.p|Trimin1|175564|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=973bp
MALLSAELPNVRRLLAYIDSEDGACHLRDESWAAKLVELAYELQDRSVLR
EAELLFWHALDITDGLQVVGAQHASNATTLNGLAGLLQDQGKLAQAELMY
RRALAIREETLGAEHPTTITSLNNLAVVLNTQGKLAEAELLYQCALANFQ
KAFGAELTDTLAASLLSNFAELLAAQGKQAEAEPLHRRALAARVEALGFQ
HPDTAVSLNNLAGLLLAQGKLAEAEPLFQRALGIREEVLGANHPHTAVLL
NNLAELRQEQGWLVEADVLHRRALAIREKALGMQHPDTASSLSSIATLLR
AQGHLTDSELLHRRALAVREEVLGAKHLDTATSLNNLTLVLNEQGELADA
EPLYQRALAILQEVLGAEHPDTASVLSNLAVLLKDQGKLVDAEPLQRHAL
AIHEKALGANHPGTAMSLSNLAVLLHDRSSLAEAELLHRRALAIREEVYG
FSHPRTATSLVNLAAVLHDQGRQADAEPLYRRGLAIREQALGAKHPDTAS
SLNSLAELLRAQYKLVEAESLYRRALAIREEACGAKHPNTAESLSNFAML
LQEQGKLAEAAPLYRRALAIREEARGAKHPDTAESLSNFAVLLQEQGKLA
EAELLYQRALAIREEAFGAEHNDTATSLNNLASLLRAQGKLAEAEPLYRR
TLAIREKALGAWHTDTATSLNNLAMLLETQDKLAEAEPLYQRALAIIEEA
YGAKHPSTATVLGNLAILRQNQGKLAEAELLHQRALAIAEEALGAEHPDT
ARSLNNLAVLLLSQDKLAEAEPLCWRALAIKEQRLGVSHPSTAASLSTLA
SLLQNQGKLAEAEPLCRRALAIREEALGAEHHDTATSLNNLASLLQDQGN
LADAEPLFRRALAITERAFGAEHTDTALSLNNLATLLETQGNLAEAEPLY
RRALAINEEALGAQHPDTVTVRDDLADLSEARQLQPAGAPAHAGHLQEAP
SAEHPPSKMAATVLNKSLQLHD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002151Kinesin_light
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf