Trimin1|175515|e_gw1.126.10.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|175515
Unique Name	Trimin1\|175515\|e_gw1.126.10.1
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	131

Homology

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BLAST of jgi.p|Trimin1|175515 vs. uniprot
Match: A0A836CME5_9STRA (Rhodanese domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CME5_9STRA)

HSP 1 Score: 274 bits (701), Expect = 1.640e-93
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0

Query:    1 MGLVQPQGFKDITVVQAVQWMEKPGHGFNYLDIRCEEEHETMVAPKSSINVPAFTPDGDFEDENVEWIPVPTFEADVEARFGKDAKLLIGCRAGNRSTLACKRLVAAGFENLWNVESSSYMRTRQMGDDF 130
            MGLVQPQGFKDITVVQAVQWMEKPGHGFNYLDIRCEEEHETMVAPKSSINVPAFTPDGDFEDENVEWIPVPTFEADVEARFGKDAKLLIGCRAGNRSTLACKRLVAAGFENLWNVESSSYMRTRQMGDDF
Sbjct:    1 MGLVQPQGFKDITVVQAVQWMEKPGHGFNYLDIRCEEEHETMVAPKSSINVPAFTPDGDFEDENVEWIPVPTFEADVEARFGKDAKLLIGCRAGNRSTLACKRLVAAGFENLWNVESSSYMRTRQMGDDF 130

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BLAST of jgi.p|Trimin1|175515 vs. uniprot
Match: A0A523DJD0_9BACT (Rhodanese-like domain-containing protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A523DJD0_9BACT)

HSP 1 Score: 63.5 bits (153), Expect = 4.480e-10
Identity = 40/107 (37.38%), Postives = 61/107 (57.01%), Query Frame = 0

Query:   10 KDITVVQAVQWMEKPGHGFNYLDIRCEEEHETMVAPKSSINVPAFTPDGDFEDENVEWIPVPTFEADVEARFGKDAKLLIGCRAGNRSTLACKRLVAAGFENLWNVE 116
            KD+ V +A Q ++  G G+ Y+D+R   E+E    P+ + NVP    D     +  +  P P F A ++A +  DAKLLIGC+ G RS+ A + L AAG+ +  NV+
Sbjct:    4 KDVGVQEAHQ-LQTTG-GYTYVDVRSVPEYENGH-PEGAHNVPLLHRDS----QTGQMTPNPEFLAVMQANYASDAKLLIGCQVGGRSSRAVQMLTAAGYGSAMNVK 103

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BLAST of jgi.p|Trimin1|175515 vs. uniprot
Match: A0A835E254_9POAL (Rhodanese domain-containing protein n=2 Tax=Digitaria exilis TaxID=1010633 RepID=A0A835E254_9POAL)

HSP 1 Score: 63.2 bits (152), Expect = 5.370e-10
Identity = 41/107 (38.32%), Postives = 59/107 (55.14%), Query Frame = 0

Query:   12 ITVVQAVQWMEKPGHGFNYLDIRCEEEHETMVAPKSSINVPA--FTPDGDFEDENVEWIPVPTFEADVEARFGKDAKLLIGCRAGNRSTLACKRLVAAGFENLWNVE 116
            + V  A + +   GH   YLD+R EEE       K S+NVP   FT  G   ++N+++I        V A F K   +++GC++G RS LAC  L+ AGFEN+ N+E
Sbjct:   29 VDVAAASELVRSGGH--RYLDVRTEEEFRNGHV-KDSLNVPYVFFTSQG--REKNLKFIK------QVAAHFDKQDSIVVGCKSGVRSELACSDLMTAGFENVKNME 124

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BLAST of jgi.p|Trimin1|175515 vs. uniprot
Match: A0A1B6PJS5_SORBI (Rhodanese domain-containing protein n=4 Tax=Sorghum bicolor TaxID=4558 RepID=A0A1B6PJS5_SORBI)

HSP 1 Score: 63.5 bits (153), Expect = 9.190e-10
Identity = 42/107 (39.25%), Postives = 58/107 (54.21%), Query Frame = 0

Query:   12 ITVVQAVQWMEKPGHGFNYLDIRCEEEHETMVAPKSSINVPA--FTPDGDFEDENVEWIPVPTFEADVEARFGKDAKLLIGCRAGNRSTLACKRLVAAGFENLWNVE 116
            + V  A   +   GH   YLD+R EEE       + S+NVP   FT  G   ++N      P F A V A F K+  +++GC++G RS LAC  L+AAGF N+ N+E
Sbjct:   78 VGVAAASDLIRSGGH--RYLDVRTEEEFRNGHV-EDSLNVPYLFFTSQG--REKN------PRFVAQVAADFDKEDNIVVGCKSGVRSELACADLMAAGFRNVKNIE 173

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BLAST of jgi.p|Trimin1|175515 vs. uniprot
Match: K3ZXT6_SETIT (Rhodanese domain-containing protein n=3 Tax=Paniceae TaxID=147428 RepID=K3ZXT6_SETIT)

HSP 1 Score: 62.4 bits (150), Expect = 1.080e-9
Identity = 42/107 (39.25%), Postives = 57/107 (53.27%), Query Frame = 0

Query:   12 ITVVQAVQWMEKPGHGFNYLDIRCEEEHETMVAPKSSINVPA--FTPDGDFEDENVEWIPVPTFEADVEARFGKDAKLLIGCRAGNRSTLACKRLVAAGFENLWNVE 116
            + V  A   +   GH   YLD+R EEE       + S+NVP   FT  G   ++N      P F   V A F K   +++GC++G RS LAC  L+AAGFEN+ N+E
Sbjct:   30 VDVAAAGDLVRSGGH--RYLDVRTEEEFRNGHV-EDSLNVPYLFFTSQG--REKN------PKFIEQVAAHFDKQDSIVVGCKSGVRSELACFDLMAAGFENVKNIE 125

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BLAST of jgi.p|Trimin1|175515 vs. uniprot
Match: A0A1M3MV81_9DELT (Rhodanese domain-containing protein n=1 Tax=Myxococcales bacterium 68-20 TaxID=1895795 RepID=A0A1M3MV81_9DELT)

HSP 1 Score: 59.7 bits (143), Expect = 6.650e-9
Identity = 36/86 (41.86%), Postives = 48/86 (55.81%), Query Frame = 0

Query:   27 GFNYLDIRCEEEHETMVAPKSSINVPAFTPDGDFEDENVEWIPVPTFEADVEARFGKDAKLLIGCRAGNRSTLACKRLVAAGFENL 112
            GF Y+D+R  EE      P  SINVP     GD      +++P       +EA+F KDA +L+GC+AG RS  A   L+AAGF N+
Sbjct:   20 GFTYVDVRTPEEF-AEGRPAGSINVPL----GD------DFVPA------MEAKFAKDAPILVGCKAGGRSLRAANALIAAGFTNV 88

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BLAST of jgi.p|Trimin1|175515 vs. uniprot
Match: A0A2T7ES26_9POAL (Rhodanese domain-containing protein n=4 Tax=Panicum TaxID=4539 RepID=A0A2T7ES26_9POAL)

HSP 1 Score: 60.1 bits (144), Expect = 8.780e-9
Identity = 42/107 (39.25%), Postives = 56/107 (52.34%), Query Frame = 0

Query:   12 ITVVQAVQWMEKPGHGFNYLDIRCEEEHETMVAPKSSINVPA--FTPDGDFEDENVEWIPVPTFEADVEARFGKDAKLLIGCRAGNRSTLACKRLVAAGFENLWNVE 116
            + V  A   +   GH   YLD+R  EE       K S+NVP   FT  G   ++N      P F   V A F K   +++GC++G RS LAC  L+AAGFEN+ N+E
Sbjct:   33 VGVAAAGDLLRSGGH--RYLDVRTAEEFRNGHV-KDSLNVPYVFFTSQG--REKN------PQFIEQVVAHFDKQDNIVVGCKSGVRSELACFDLMAAGFENVNNME 128

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BLAST of jgi.p|Trimin1|175515 vs. uniprot
Match: UPI0019D6A077 (thiosulfate sulfurtransferase 16, chloroplastic-like n=1 Tax=Panicum virgatum TaxID=38727 RepID=UPI0019D6A077)

HSP 1 Score: 60.8 bits (146), Expect = 8.970e-9
Identity = 42/107 (39.25%), Postives = 57/107 (53.27%), Query Frame = 0

Query:   12 ITVVQAVQWMEKPGHGFNYLDIRCEEEHETMVAPKSSINVPA--FTPDGDFEDENVEWIPVPTFEADVEARFGKDAKLLIGCRAGNRSTLACKRLVAAGFENLWNVE 116
            + V  A   +   GH   YLD+R EEE   +   K S+NVP   FT  G   ++N      P F   V A F K   +++GC++G RS LAC  L+AAGF N+ N+E
Sbjct:   74 VDVAAAGDLLRSGGH--RYLDVRTEEEFR-IGHVKDSLNVPYVFFTSQG--REKN------PQFIEQVAAHFDKQDNIVVGCKSGVRSELACFDLMAAGFGNVKNME 169

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BLAST of jgi.p|Trimin1|175515 vs. uniprot
Match: A0A2E0TIV0_9DELT (Rhodanese n=1 Tax=Sandaracinus sp. TaxID=2024858 RepID=A0A2E0TIV0_9DELT)

HSP 1 Score: 58.5 bits (140), Expect = 3.270e-8
Identity = 42/122 (34.43%), Postives = 65/122 (53.28%), Query Frame = 0

Query:   12 ITVVQAVQWMEKPGHGFNYLDIRCEEEHETMVAPKSSINVPAFTPDGDFEDENVEWIPVPTFEADVEARFGKDAKLLIGCRAGNRSTLACKRLVAAGFENL------WNVESSSYMRTRQMG 127
            IT  +A++ ME    G+ Y+D+R   E E    P+ + NVP          +N +++ V      +EA FGKDAKL++GC+AG RS  A + L+AAGF ++      W     S+ +T + G
Sbjct:    6 ITPEEALERMED--EGWVYVDVRSIPEFEGGH-PEGAYNVPWKHRGAAGMSDNPDFLKV------MEAAFGKDAKLILGCQAGGRSRSAAEALLAAGFSSVVDQLAGWGGAKDSFGQTVEPG 118

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BLAST of jgi.p|Trimin1|175515 vs. uniprot
Match: A0A2E7BNM1_9BACT (Rhodanese n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2E7BNM1_9BACT)

HSP 1 Score: 58.2 bits (139), Expect = 4.940e-8
Identity = 32/90 (35.56%), Postives = 49/90 (54.44%), Query Frame = 0

Query:   27 GFNYLDIRCEEEHETMVAPKSSINVPAFTPDGDFEDENVEWIPVPTFEADVEARFGKDAKLLIGCRAGNRSTLACKRLVAAGFENLWNVE 116
            G+ Y+D+R   E++    PK + NVP          E  +  P P F   ++A +  DAKLL+GC+ G RS+ A + L  AG+E + NV+
Sbjct:   20 GYTYVDVRSVPEYQNGH-PKGAQNVPLLL----LNSETKQMQPNPEFLVVMQANYPTDAKLLVGCQVGGRSSRAAQVLAEAGYETVVNVK 104

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|175515 vs. uniprot

BLAST of jgi.p|Trimin1|175515 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A836CME5_9STRA	1.640e-93	100.00	Rhodanese domain-containing protein n=1 Tax=Tribon...	[more]
A0A523DJD0_9BACT	4.480e-10	37.38	Rhodanese-like domain-containing protein n=1 Tax=A...	[more]
A0A835E254_9POAL	5.370e-10	38.32	Rhodanese domain-containing protein n=2 Tax=Digita...	[more]
A0A1B6PJS5_SORBI	9.190e-10	39.25	Rhodanese domain-containing protein n=4 Tax=Sorghu...	[more]
K3ZXT6_SETIT	1.080e-9	39.25	Rhodanese domain-containing protein n=3 Tax=Panice...	[more]
A0A1M3MV81_9DELT	6.650e-9	41.86	Rhodanese domain-containing protein n=1 Tax=Myxoco...	[more]
A0A2T7ES26_9POAL	8.780e-9	39.25	Rhodanese domain-containing protein n=4 Tax=Panicu...	[more]
UPI0019D6A077	8.970e-9	39.25	thiosulfate sulfurtransferase 16, chloroplastic-li...	[more]
A0A2E0TIV0_9DELT	3.270e-8	34.43	Rhodanese n=1 Tax=Sandaracinus sp. TaxID=2024858 R...	[more]
A0A2E7BNM1_9BACT	4.940e-8	35.56	Rhodanese n=1 Tax=Acidobacteria bacterium TaxID=19...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036873	Rhodanese-like domain superfamily	GENE3D	3.40.250.10		coord: 9..126 e-value: 7.5E-17 score: 63.5
IPR036873	Rhodanese-like domain superfamily	SUPERFAMILY	52821	Rhodanese/Cell cycle control phosphatase	coord: 7..116
IPR044684	Rhodanese-like domain-containing protein STR17/STR18/HARC1-like	PANTHER	PTHR44542	THIOSULFATE SULFURTRANSFERASE 18	coord: 10..117
IPR001763	Rhodanese-like domain	PROSITE	PS50206	RHODANESE_3	coord: 24..118 score: 9.579453

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_126	contig	Contig_126:79511..80118 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|175515	mRNA_13545	Tribonema minus UTEX_B_3156	mRNA	Contig_126 79511..80118 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|175515|e_gw1.126.10.1 ID=Trimin1|175515|e_gw1.126.10.1|Name=jgi.p|Trimin1|175515|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=131bp
MGLVQPQGFKDITVVQAVQWMEKPGHGFNYLDIRCEEEHETMVAPKSSIN
VPAFTPDGDFEDENVEWIPVPTFEADVEARFGKDAKLLIGCRAGNRSTLA
CKRLVAAGFENLWNVESSSYMRTRQMGDDF*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036873	Rhodanese-like_dom_sf
IPR044684	STR17/STR18/HARC1-like
IPR001763	Rhodanese-like_dom