Trimin1|175192|e_gw1.122.105.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|175192
Unique NameTrimin1|175192|e_gw1.122.105.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length311
Homology
BLAST of jgi.p|Trimin1|175192 vs. uniprot
Match: A0A835ZBS4_9STRA (Ubiquitin-conjugating enzyme/RWD-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBS4_9STRA)

HSP 1 Score: 645 bits (1664), Expect = 2.350e-234
Identity = 310/310 (100.00%), Postives = 310/310 (100.00%), Query Frame = 0
Query:    1 MTVVECTSALPYPDRPWEATLSIHGKHEFTIKKAPGSGFTCSTRDDFLGDNLWLENLEEAVSVANGVETVLKEALGVYKCIAGPASDKGSDGESDYEYQEDMGMDNVDDTELAAKYAEKAVSANKATGTWEDRDEVPLIGGYACTYVCIANTRLMRDLSRLMRTDTSSLGFTLELVHDDNLTLWRVKVFGFTDCPLAEDMVKLKKERKLEHIELEMKFPEDYPYSPPFCRVVYPRFIRQTGYILDGAFCFELLTKQGWTPTNDIETVIVQLRFLMVFGHARIDFNETTPYCERNSLNAFRGAAKQHNWAI 310
            MTVVECTSALPYPDRPWEATLSIHGKHEFTIKKAPGSGFTCSTRDDFLGDNLWLENLEEAVSVANGVETVLKEALGVYKCIAGPASDKGSDGESDYEYQEDMGMDNVDDTELAAKYAEKAVSANKATGTWEDRDEVPLIGGYACTYVCIANTRLMRDLSRLMRTDTSSLGFTLELVHDDNLTLWRVKVFGFTDCPLAEDMVKLKKERKLEHIELEMKFPEDYPYSPPFCRVVYPRFIRQTGYILDGAFCFELLTKQGWTPTNDIETVIVQLRFLMVFGHARIDFNETTPYCERNSLNAFRGAAKQHNWAI
Sbjct:    1 MTVVECTSALPYPDRPWEATLSIHGKHEFTIKKAPGSGFTCSTRDDFLGDNLWLENLEEAVSVANGVETVLKEALGVYKCIAGPASDKGSDGESDYEYQEDMGMDNVDDTELAAKYAEKAVSANKATGTWEDRDEVPLIGGYACTYVCIANTRLMRDLSRLMRTDTSSLGFTLELVHDDNLTLWRVKVFGFTDCPLAEDMVKLKKERKLEHIELEMKFPEDYPYSPPFCRVVYPRFIRQTGYILDGAFCFELLTKQGWTPTNDIETVIVQLRFLMVFGHARIDFNETTPYCERNSLNAFRGAAKQHNWAI 310          
BLAST of jgi.p|Trimin1|175192 vs. uniprot
Match: D8LEA1_ECTSI (UBC core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEA1_ECTSI)

HSP 1 Score: 256 bits (655), Expect = 2.360e-80
Identity = 142/301 (47.18%), Postives = 181/301 (60.13%), Query Frame = 0
Query:   20 TLSIHGKHEFTIKKAPGSG-FTCSTRDDFLGDNLWLENLEEAVSVANGVETVLKEALGVYKCIAGPASDKGSDGESDYEYQEDMGMDNVDDTELAAKYAEKAVSANKATGTWEDRDEVPLIGGYACT------YVCIANTRLMRDLSRLMRTDTSSLGFTLELVHDDNLTLWRVKVFGFTDCPLAEDMVKLKKERKLEHIELEMKFPEDYPYSPPFCRVVYPRFIRQTGYILDGAFCFELLTKQGWTPTNDIETVIVQLRFLMVFGHARIDFNETT---PYCERNSLNAFRGAAKQHNWAI 310
            TL +     FT+   PG G F  ST   FL D L++ENLEE  + A  ++ V+  A  VY CI+G                         D E A    +++    +    +ED D   ++ G A +          ANTRLMRDLSRLMR+DT  LGF+L+L +DD L  W + +FGF+DCPLAEDM +L+KE+ L+H+ L MKF +DYP+SPPF  +VYPRF R TGYI+DGAFC ELLT QGWTPTNDIE+V+VQ+R  MV G ARIDF+ T+   PY E  +  AFR AAK H WAI
Sbjct:   55 TLDLGKGKVFTLSGVPGRGPFCVSTVHPFLLDGLFVENLEEIQAQARRIQEVMSAAAEVYMCISGEXXXXXXXXXXXXXXXXXXXXXXXXDDEKA----KRSFPTQEGGSVFEDTDISQMLSGKAKSGAGAKSKAASANTRLMRDLSRLMRSDTKKLGFSLQLKNDDALHEWNINLFGFSDCPLAEDMKRLEKEKHLDHVRLMMKFKDDYPFSPPFVHIVYPRFKRSTGYIIDGAFCMELLTNQGWTPTNDIESVVVQIRAQMVVGKARIDFDATSVTQPYSEDRAKAAFRSAAKIHKWAI 351          
BLAST of jgi.p|Trimin1|175192 vs. uniprot
Match: A0A7S3XWH9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XWH9_HETAK)

HSP 1 Score: 222 bits (565), Expect = 5.880e-68
Identity = 122/276 (44.20%), Postives = 171/276 (61.96%), Query Frame = 0
Query:   37 SGFTCSTRDDFLGDNLWLENLEEAVSVANGVETVLKEALGVYKCIAGPASDKGSDGESDYEYQEDMGMDNVDDTELAAKYAEKAVSANKAT-GTWEDRDEVPLIGGYACTYVCIANTRLMRDLSRLMRTDTSSLGFTLELVHDDNLTLWRVKVFGFTDCPLAEDMVKLKKERKLEHIELEMKFPEDYPYSPPFCRVVYPRFIRQTGYI-LDGAFCFELLTKQGWTPTNDIETVIVQLRFLMVFGHARIDFNETTPYCERNSLNAFRGAAKQHNWAI 310
            S F+  T D+FL DN +LEN+E+AVS A  VE VL      YK I     +  +    D EY  D G D  +D +     AE   + ++AT   W D  E+   GG+  T     N RLM DL+++MRTDT+ LGF+LE  ++D++  W  K+F F DC LA+D+V+LK+ + ++ +ELE++F  DYP+SPPF RVVYPRF   TG++ + G+ C ELLT  GWTPTNDIE++++Q+R  M+ G ARI+F    PY E  + +AF   A QH W+I
Sbjct:    6 SSFSVETSDEFLLDNFFLENIEDAVSEATAVEEVLCAISDTYKDITSGNEEGDNSANEDEEY--DYGSD--EDFK-----AEPPPTKDRATKDDWRDVAEIG--GGHGAT---AGNKRLMTDLAKIMRTDTTGLGFSLEPKNEDSMDRWVCKLFNFEDCALAQDLVQLKERKDIDFVELELQFKSDYPFSPPFIRVVYPRFKFHTGHVTIGGSICMELLTNSGWTPTNDIESILIQIRSEMIAGDARIEFRHDYPYDEAEARSAFTRVASQHGWSI 267          
BLAST of jgi.p|Trimin1|175192 vs. uniprot
Match: B8C5U5_THAPS (UBC core domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C5U5_THAPS)

HSP 1 Score: 145 bits (366), Expect = 6.600e-36
Identity = 68/131 (51.91%), Postives = 92/131 (70.23%), Query Frame = 0
Query:  153 RLMRDLSRLMRTDTSSLGFTLELVHDDNLTLWRVKVFGFT-DCPLAEDMVKLKKERKLEHIELEMKFPEDYPYSPPFCRVVYPRFIRQTGYILDGAFCFELLTKQGWTPTNDIETVIVQLRFLMVFGHARI 282
            RL  DL ++M  DT   GF+LE   +D++  W +K+FGF  D  LA+D++ +     ++H+ELEM FP+DYP+ PPF RVV PRF RQTG++++GA C ELLTK GW P NDIE+VIV +R LMV G  R+
Sbjct:  325 RLASDLYKIMMADTDEAGFSLEPCDEDSMDKWCIKLFGFDCDSHLAKDLMVVG----MDHVELEMSFPDDYPFEPPFVRVVRPRFKRQTGFVMNGALCMELLTKDGWNPINDIESVIVSIRSLMVVGDGRL 451          
BLAST of jgi.p|Trimin1|175192 vs. uniprot
Match: A0A2P6MUC2_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6MUC2_9EUKA)

HSP 1 Score: 146 bits (369), Expect = 9.690e-36
Identity = 73/166 (43.98%), Postives = 105/166 (63.25%), Query Frame = 0
Query:  150 ANTRLMRDLSRLMRTDTSSLGFTLELVHD-----DNLTLWRVKVFGFT-DCPLAEDMVKLKKERKLEHIELEMKFPEDYPYSPPFCRVVYPRFIRQTGYI-LDGAFCFELLTKQGWTPTNDIETVIVQLRFLMVFGHARIDFNETTPYCERNSLNAFRGAAKQHNW 308
            A  RL+RDL  L   DT SLGF+ E   D     +NL  W++ +FGF     LA DM + +K  +   I +EM+F +DYPY+PPF RVV PRF  +TG++ + G+ C +LLT  GW  TNDIE++++Q+R  ++ G+AR+D   TTPY E+ + +AF+  A  H W
Sbjct:  552 ATMRLIRDLKSLNSGDTKSLGFSAEPTIDTRTGLENLYHWKITLFGFDPSSELANDMKRYEKTSQEAFITMEMRFSKDYPYAPPFVRVVKPRFAFRTGHVTIGGSICMDLLTNAGWASTNDIESILIQIRAELLSGNARLDEKNTTPYTEQEAWDAFKRVATSHGW 717          
BLAST of jgi.p|Trimin1|175192 vs. uniprot
Match: A0A1Z5K8B1_FISSO (Ubiquitin-conjugating enzyme E2 Q n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K8B1_FISSO)

HSP 1 Score: 141 bits (355), Expect = 1.100e-35
Identity = 68/132 (51.52%), Postives = 90/132 (68.18%), Query Frame = 0
Query:  153 RLMRDLSRLMRTDTSSLGFTLELVHDDNLTLWRVKVFGFT-DCPLAEDMVKLKKERKLEHIELEMKFPEDYPYSPPFCRVVYPRFIRQTGYILDGAFCFELLTKQGWTPTNDIETVIVQLRFLMVFGHARID 283
            RL +DL R+M  DTS  GF+L    +D++  W +++F F  D  LA+DM  L     ++HIELEM FP+ YP+ PPF RVV PRF RQTG+++ GA C ELLTK GW P NDIE+VIV +R L+V G  R++
Sbjct:  159 RLAQDLYRIMNQDTSEAGFSLHPTAEDSMKHWTIELFQFDPDSNLAKDMKVLG----IDHIELEMTFPDQYPFEPPFVRVVKPRFKRQTGFVMSGALCMELLTKDGWNPVNDIESVIVSIRSLLVVGDGRLE 286          
BLAST of jgi.p|Trimin1|175192 vs. uniprot
Match: A0A7R9YW98_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9YW98_9STRA)

HSP 1 Score: 144 bits (363), Expect = 1.740e-35
Identity = 70/147 (47.62%), Postives = 96/147 (65.31%), Query Frame = 0
Query:  153 RLMRDLSRLMRTDTSSLGFTLELVHDDNLTLWRVKVFGFT-DCPLAEDMVKLKKERKLEHIELEMKFPEDYPYSPPFCRVVYPRFIRQTGYILDGAFCFELLTKQGWTPTNDIETVIVQLRFLMVFGHARIDFNETTPYCERNSLNA 298
            RL  DL ++M  DT   GF +E   +D++ LW +++F F  D  L++D++ L     L H+ELEM FP DYP+ PPF RVV PRF RQTG++++GA C ELLTK+GW P NDIE+VIV +R L+V G  R+      P  +R +L A
Sbjct:  314 RLAADLYKIMMADTDEAGFQIEPKSEDSMDLWTIRLFAFDEDSNLSKDLMVLG----LNHVELEMSFPGDYPFEPPFVRVVRPRFKRQTGFVMNGALCMELLTKEGWNPVNDIESVIVSIRSLLVVGDGRLQAAVDLPEKKREALLA 456          
BLAST of jgi.p|Trimin1|175192 vs. uniprot
Match: B7G7I5_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G7I5_PHATC)

HSP 1 Score: 142 bits (359), Expect = 4.080e-35
Identity = 69/132 (52.27%), Postives = 92/132 (69.70%), Query Frame = 0
Query:  153 RLMRDLSRLMRTDTSSLGFTLELVHDDNLTLWRVKVFGFT-DCPLAEDMVKLKKERKLEHIELEMKFPEDYPYSPPFCRVVYPRFIRQTGYILDGAFCFELLTKQGWTPTNDIETVIVQLRFLMVFGHARID 283
            RL +DL R+M  DT+  GF+L+   +D++  W +K+F F  D  LA+DM+ L     LEHIELEM FPE YP+ PPF RV  PRF RQTG++++GA C ELLT +GW P NDIE+VIV +R L+V G  R++
Sbjct:  292 RLAQDLYRIMNQDTNKAGFSLKPSKEDSMERWTIKLFKFDEDSNLAKDMLVLG----LEHIELEMSFPEQYPFEPPFVRVSRPRFKRQTGFVMNGALCMELLTNEGWNPINDIESVIVSVRSLLVVGDGRLE 419          
BLAST of jgi.p|Trimin1|175192 vs. uniprot
Match: A0A6B2LKV9_9EUKA (UBC core domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LKV9_9EUKA)

HSP 1 Score: 134 bits (337), Expect = 4.800e-35
Identity = 69/163 (42.33%), Postives = 102/163 (62.58%), Query Frame = 0
Query:  154 LMRDLSRLMRTDTSSLGFTLELVHD-----DNLTLWRVKVFGFTDCPLAEDMVKLKKERKLEHIELEMKFPEDYPYSPPFCRVVYPRFIRQTGYI-LDGAFCFELLTKQGWTPTNDIETVIVQLRFLMVFGHARIDFNETTPYCERNSLNAFRGAAKQHNWAI 310
            +++DL  + R D+ +LGFT E   D     +NL  W VK++   D PL  D+   +K+  ++++ELEM+F E YP++PPF RVV PRF  +TG++ + G+ C ELLT  GW  TNDIE++++Q+R  M  G+AR+D N    Y E  + +AF  AA  H W I
Sbjct:    1 MIKDLKSIKREDSKALGFTAEPRIDPAKNLENLYHWIVKLYF--DGPLGTDLQASQKKFGIDYVELEMRFSEHYPFTPPFVRVVRPRFQFRTGHVTIGGSICMELLTNSGWRSTNDIESILIQIRAEMQGGNARLDLNAGQSYSEHEAWDAFNRAAGAHGWDI 161          
BLAST of jgi.p|Trimin1|175192 vs. uniprot
Match: A0A448Z8A8_9STRA (UBC core domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z8A8_9STRA)

HSP 1 Score: 141 bits (355), Expect = 9.550e-35
Identity = 68/131 (51.91%), Postives = 91/131 (69.47%), Query Frame = 0
Query:  153 RLMRDLSRLMRTDTSSLGFTLELVHDDNLTLWRVKVFGFT-DCPLAEDMVKLKKERKLEHIELEMKFPEDYPYSPPFCRVVYPRFIRQTGYILDGAFCFELLTKQGWTPTNDIETVIVQLRFLMVFGHARI 282
            RL +DL R+M  DT   GF+L    +D++  W +K+F F  D  LA+DM+ +     ++HI+LEMKFPE YP+ PPF RVV PRF RQTG++++GA C ELLTK GW P NDIE+VIV +R L+V G  R+
Sbjct:  270 RLAQDLYRIMNQDTEEAGFSLAPQTEDSMEKWTIKLFQFDPDSNLAKDMLVVG----IDHIKLEMKFPEQYPFEPPFVRVVNPRFKRQTGFVMNGALCMELLTKDGWNPINDIESVIVSVRSLLVVGDGRL 396          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|175192 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZBS4_9STRA2.350e-234100.00Ubiquitin-conjugating enzyme/RWD-like protein n=1 ... [more]
D8LEA1_ECTSI2.360e-8047.18UBC core domain-containing protein n=2 Tax=Ectocar... [more]
A0A7S3XWH9_HETAK5.880e-6844.20Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
B8C5U5_THAPS6.600e-3651.91UBC core domain-containing protein n=1 Tax=Thalass... [more]
A0A2P6MUC2_9EUKA9.690e-3643.98Uncharacterized protein n=1 Tax=Planoprotostelium ... [more]
A0A1Z5K8B1_FISSO1.100e-3551.52Ubiquitin-conjugating enzyme E2 Q n=2 Tax=Fistulif... [more]
A0A7R9YW98_9STRA1.740e-3547.62Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
B7G7I5_PHATC4.080e-3552.27Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A6B2LKV9_9EUKA4.800e-3542.33UBC core domain-containing protein n=1 Tax=Arcella... [more]
A0A448Z8A8_9STRA9.550e-3551.91UBC core domain-containing protein n=1 Tax=Pseudo-... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 152..310
e-value: 5.9E-4
score: 19.9
NoneNo IPR availablePANTHERPTHR24068UBIQUITIN-CONJUGATING ENZYME E2coord: 151..284
NoneNo IPR availablePANTHERPTHR24068:SF350UBIQUITIN-CONJUGATING ENZYME FAMILY PROTEINcoord: 151..284
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10Ubiquitin Conjugating Enzymecoord: 148..308
e-value: 1.1E-34
score: 121.5
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 149..277
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 153..275
e-value: 1.3E-10
score: 41.1
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBC_2coord: 149..310
score: 18.256535

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_122contigContig_122:304581..309085 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|175192mRNA_13933Tribonema minus UTEX_B_3156 mRNAContig_122 304581..309085 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|175192|e_gw1.122.105.1 ID=Trimin1|175192|e_gw1.122.105.1|Name=jgi.p|Trimin1|175192|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=311bp
MTVVECTSALPYPDRPWEATLSIHGKHEFTIKKAPGSGFTCSTRDDFLGD
NLWLENLEEAVSVANGVETVLKEALGVYKCIAGPASDKGSDGESDYEYQE
DMGMDNVDDTELAAKYAEKAVSANKATGTWEDRDEVPLIGGYACTYVCIA
NTRLMRDLSRLMRTDTSSLGFTLELVHDDNLTLWRVKVFGFTDCPLAEDM
VKLKKERKLEHIELEMKFPEDYPYSPPFCRVVYPRFIRQTGYILDGAFCF
ELLTKQGWTPTNDIETVIVQLRFLMVFGHARIDFNETTPYCERNSLNAFR
GAAKQHNWAI*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016135UBQ-conjugating_enzyme/RWD
IPR000608UBQ-conjugat_E2