Trimin1|175004|e_gw1.120.74.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|175004
Unique Name	Trimin1\|175004\|e_gw1.120.74.1
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	292

Homology

[Close]

BLAST of jgi.p|Trimin1|175004 vs. uniprot
Match: A0A835ZEN9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEN9_9STRA)

HSP 1 Score: 588 bits (1516), Expect = 1.970e-212
Identity = 291/291 (100.00%), Postives = 291/291 (100.00%), Query Frame = 0

Query:    1 LARYDLSLPGSALVAVHVSKTGGTTLDHVLQKGVGGRGLGPGVAQLQPDCVLEKWMYFAWREMPISERFNYTTCQIVSGEVDAWTLRAWVGEPETTPPGDRRKHLVTVLRDPYARLLSQFDHNTHWEKAKMAECATLYDVLEPRSRCVARLAAAPGNIVDKYRSWQAANVGDAAHLASTFSFFGLTEHFFASLCLLYYTFRDAPRFERLCARGAAGAALVPRKNRKDPRFNYTEAARNDVALRERCRDTNAADFALYDAAAALFRARVAAMEAETGISGFLLEEPSGVEGG 291
            LARYDLSLPGSALVAVHVSKTGGTTLDHVLQKGVGGRGLGPGVAQLQPDCVLEKWMYFAWREMPISERFNYTTCQIVSGEVDAWTLRAWVGEPETTPPGDRRKHLVTVLRDPYARLLSQFDHNTHWEKAKMAECATLYDVLEPRSRCVARLAAAPGNIVDKYRSWQAANVGDAAHLASTFSFFGLTEHFFASLCLLYYTFRDAPRFERLCARGAAGAALVPRKNRKDPRFNYTEAARNDVALRERCRDTNAADFALYDAAAALFRARVAAMEAETGISGFLLEEPSGVEGG
Sbjct:    1 LARYDLSLPGSALVAVHVSKTGGTTLDHVLQKGVGGRGLGPGVAQLQPDCVLEKWMYFAWREMPISERFNYTTCQIVSGEVDAWTLRAWVGEPETTPPGDRRKHLVTVLRDPYARLLSQFDHNTHWEKAKMAECATLYDVLEPRSRCVARLAAAPGNIVDKYRSWQAANVGDAAHLASTFSFFGLTEHFFASLCLLYYTFRDAPRFERLCARGAAGAALVPRKNRKDPRFNYTEAARNDVALRERCRDTNAADFALYDAAAALFRARVAAMEAETGISGFLLEEPSGVEGG 291

[Close]

BLAST of jgi.p|Trimin1|175004 vs. uniprot
Match: F2UHC8_SALR5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UHC8_SALR5)

HSP 1 Score: 56.2 bits (134), Expect = 2.300e-5
Identity = 72/298 (24.16%), Postives = 111/298 (37.25%), Query Frame = 0

Query:   16 VHVSKTGGTTLDHVLQKGVGGRGLGPGVAQLQPDCVLEKWMYFAWREMPISERFNYTTCQIVSGEVDAWTLRAWVGEPETTPPGDRRKHLVTVLRDPYARLLSQFDH---------NTHWEKAKMAECATLYDVLEPRSRCVARLAAAPGNIVDKYRSWQA-----ANVGDAAHLASTFSFFGLTEHFFASLCLLYYTFR-----------------------DAPRFERLCARGAAGAALVPRKNRKDPRFNYTEAARNDVALRERCRDTNAADFALYDAAAALFRARVAAMEAETG 276
            +H+SKTGGTTL+H++Q+ V      P        C  EK  +         +    + C +++ E     +   +  P   P      H++ +LR P  R LSQF H         N  W        ++L ++ +             G +  +YR WQ+      N+     L +  +F G+T+ +  ++CL Y+TF+                       D  RF+    R         R      R N   +  +    RE   +    D ALYDAA  LF  RVA ME   G
Sbjct:   75 LHISKTGGTTLEHIVQQLV----RHPASPAAMTVCKTEKHPFSHPPLFADPKELERSGCNVITAEGRMRFIEQQL--PYVQP------HMLILLRHPVLRTLSQFRHDLIQESTLANKEWRTPYTGGFSSLKELYKNTK----------GVVHKRYRDWQSDLLYHPNITFPDALENM-TFIGITDFYKTTMCLFYFTFQIPSLLDGCQERPLTVYNKACQGDDCERFQNTKERHV-------RDEDNHKRLNDALSHVDTEVTRELIEEHTRLDQALYDAALDLFWRRVAVMEQVVG 342

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|175004 vs. uniprot

BLAST of jgi.p|Trimin1|175004 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A835ZEN9_9STRA	1.970e-212	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
F2UHC8_SALR5	2.300e-5	24.16	Uncharacterized protein n=1 Tax=Salpingoeca rosett...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 12..277 e-value: 8.5E-18 score: 66.6

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_120	contig	Contig_120:229904..230779 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|175004	mRNA_14709	Tribonema minus UTEX_B_3156	mRNA	Contig_120 229904..230779 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|175004|e_gw1.120.74.1 ID=Trimin1|175004|e_gw1.120.74.1|Name=jgi.p|Trimin1|175004|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=292bp
LARYDLSLPGSALVAVHVSKTGGTTLDHVLQKGVGGRGLGPGVAQLQPDC
VLEKWMYFAWREMPISERFNYTTCQIVSGEVDAWTLRAWVGEPETTPPGD
RRKHLVTVLRDPYARLLSQFDHNTHWEKAKMAECATLYDVLEPRSRCVAR
LAAAPGNIVDKYRSWQAANVGDAAHLASTFSFFGLTEHFFASLCLLYYTF
RDAPRFERLCARGAAGAALVPRKNRKDPRFNYTEAARNDVALRERCRDTN
AADFALYDAAAALFRARVAAMEAETGISGFLLEEPSGVEGG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase