Trimin1|174780|e_gw1.117.22.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|174780
Unique NameTrimin1|174780|e_gw1.117.22.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length174
Homology
BLAST of jgi.p|Trimin1|174780 vs. uniprot
Match: A0A836CN45_9STRA (GIY-YIG domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN45_9STRA)

HSP 1 Score: 360 bits (925), Expect = 2.880e-126
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0
Query:    1 MSHYCYALCNDSGRTYIGYTVCPSRRLRQHNSSIKGGAKATRGRGPWRFIYVVEYINFTASEALSLEWHIKHPSKGIGRRGAQARTEALKCAFLRSKFTSKSADCRVHLTTEFARLQSHLPDVDVLLTDAISIAKPDGRVQLEASPTCSPTCCSTLKVPYMLLHPKGYNLKSE 173
            MSHYCYALCNDSGRTYIGYTVCPSRRLRQHNSSIKGGAKATRGRGPWRFIYVVEYINFTASEALSLEWHIKHPSKGIGRRGAQARTEALKCAFLRSKFTSKSADCRVHLTTEFARLQSHLPDVDVLLTDAISIAKPDGRVQLEASPTCSPTCCSTLKVPYMLLHPKGYNLKSE
Sbjct:    1 MSHYCYALCNDSGRTYIGYTVCPSRRLRQHNSSIKGGAKATRGRGPWRFIYVVEYINFTASEALSLEWHIKHPSKGIGRRGAQARTEALKCAFLRSKFTSKSADCRVHLTTEFARLQSHLPDVDVLLTDAISIAKPDGRVQLEASPTCSPTCCSTLKVPYMLLHPKGYNLKSE 173          
BLAST of jgi.p|Trimin1|174780 vs. uniprot
Match: A0A836CJ24_9STRA (GIY-YIG domain-containing protein (Fragment) n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ24_9STRA)

HSP 1 Score: 145 bits (366), Expect = 1.610e-42
Identity = 62/73 (84.93%), Postives = 71/73 (97.26%), Query Frame = 0
Query:    1 MSHYCYALCNDSGRTYIGYTVCPSRRLRQHNSSIKGGAKATRGRGPWRFIYVVEYINFTASEALSLEWHIKHP 73
            MSHYCYALCN+SGRTY+GYTVCP+RR+RQHNS IKGGAKATRGRGPWRFIYVV+ I+++AS+ALSLEWHIKHP
Sbjct:    1 MSHYCYALCNESGRTYVGYTVCPARRIRQHNSDIKGGAKATRGRGPWRFIYVVDCIDYSASDALSLEWHIKHP 73          
BLAST of jgi.p|Trimin1|174780 vs. uniprot
Match: A0A836CIF4_9STRA (GIY-YIG domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIF4_9STRA)

HSP 1 Score: 106 bits (265), Expect = 3.220e-26
Identity = 48/100 (48.00%), Postives = 65/100 (65.00%), Query Frame = 0
Query:    1 MSHYCYALCNDSGRTYIGYTVCPSRRLRQHNSSIKGGAKATRGRGPWRFIYVVEYINFTASEALSLEWHIKHPS--KGIGRRGAQARTEALKCAFLRSKF 98
            M+H+CY + N+ GRTY+GYTV P RRLRQHN  I GGA++T G+GPWRF +V+   +F + + LS EWH+K P+  +   R G Q R + L       KF
Sbjct:    1 MTHFCYTIVNEQGRTYVGYTVLPKRRLRQHNGVITGGARSTAGKGPWRFAFVLTSESFDSHKGLSCEWHLKRPNGRRSRCRPGVQGRIDLLSKVVCHHKF 100          
BLAST of jgi.p|Trimin1|174780 vs. uniprot
Match: A0A835ZCR8_9STRA (GIY-YIG domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCR8_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 1.300e-23
Identity = 40/69 (57.97%), Postives = 51/69 (73.91%), Query Frame = 0
Query:    5 CYALCNDSGRTYIGYTVCPSRRLRQHNSSIKGGAKATRGRGPWRFIYVVEYINFTASEALSLEWHIKHP 73
            CY + N+ GRTY+GYTV P RRLRQHN  +KGGA+ T G+GPWR++ V+    F   +ALS EWH+KHP
Sbjct:    2 CYVIVNEQGRTYVGYTVNPKRRLRQHNGCLKGGARNTAGKGPWRYVIVLTSEAFDNRKALSAEWHLKHP 70          
BLAST of jgi.p|Trimin1|174780 vs. uniprot
Match: A0A6C0CV58_9ZZZZ (GIY-YIG domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0CV58_9ZZZZ)

HSP 1 Score: 82.4 bits (202), Expect = 6.600e-17
Identity = 39/76 (51.32%), Postives = 53/76 (69.74%), Query Frame = 0
Query:    1 MSHYCYALCNDSGRTYIGYTVCPSRRLRQHNSSIKGGAKATRGRGPWRFIYVVEYINFTA-SEALSLEWHIKHPSK 75
            M +YCY + N + RTY GYTV  +RRL+QHN  I+GGAKATRGRGPW F+ ++    +   S A+  EW IK+P++
Sbjct:    1 MVYYCYVIGNANDRTYNGYTVNLTRRLKQHNGVIQGGAKATRGRGPWEFVLILTSECWDCISVAMQHEWSIKYPTR 76          
BLAST of jgi.p|Trimin1|174780 vs. uniprot
Match: A0A6C0F1Y7_9ZZZZ (GIY-YIG domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0F1Y7_9ZZZZ)

HSP 1 Score: 80.9 bits (198), Expect = 4.920e-16
Identity = 43/97 (44.33%), Postives = 59/97 (60.82%), Query Frame = 0
Query:    3 HYCYALCNDS------GRTYIGYTVCPSRRLRQHNSSIKGGAKATRGRGPWRFIYVVEYINFTASEALSLEWHIKHPSKGIGR----RGAQARTEAL 89
            +YCY L          GRTY GYTV  + RLRQHN  IKGGA AT+ +GPW FI V+  +++T+  A+ +EW I++P++   R     GAQ R  +L
Sbjct:   34 YYCYILGQTRHVRTGVGRTYNGYTVDLTHRLRQHNGEIKGGAFATKNKGPWEFIAVMTCLDWTSVRAMQVEWLIRYPTRKKPRPTEYAGAQGRINSL 130          
BLAST of jgi.p|Trimin1|174780 vs. uniprot
Match: A0A7L9AY03_POV01 (GIY-YIG domain-containing protein n=1 Tax=Pyramimonas orientalis virus TaxID=455367 RepID=A0A7L9AY03_POV01)

HSP 1 Score: 77.8 bits (190), Expect = 3.900e-15
Identity = 41/91 (45.05%), Postives = 57/91 (62.64%), Query Frame = 0
Query:    4 YCYALCNDSGRTYIGYTVCPSRRLRQHNSSIKGGAKATRGRGPWRFIYVVEYINFTA-SEALSLEWHIKHPSKGIGR----RGAQARTEAL 89
            +CY + N+  RTY GYTV  ++RLRQHN+ IKGGA+AT  RGPW F+ V+    + + S A+  EW IK+P++   R     G   R E+L
Sbjct:    5 FCYIINNEQDRTYNGYTVDLTKRLRQHNNYIKGGARATSNRGPWSFLVVITSPCWQSISTAMQHEWSIKYPTRKRPRPKHYNGKTGRLESL 95          
BLAST of jgi.p|Trimin1|174780 vs. uniprot
Match: A0A3G4ZPN0_9VIRU (GIY-YIG nuclease n=1 Tax=Terrestrivirus sp. TaxID=2487775 RepID=A0A3G4ZPN0_9VIRU)

HSP 1 Score: 76.3 bits (186), Expect = 1.390e-14
Identity = 39/78 (50.00%), Postives = 50/78 (64.10%), Query Frame = 0
Query:    1 MSHYCYALCNDS----GRTYIGYTVCPSRRLRQHNSSIKGGAKATRGRGPWRFIYVVEYINFTASEALSLEWHIKHPS 74
            MS+YCY L + +      TY+G TV P+RRLRQHN  + GGAKAT+ R P+    ++     T  +ALS EWHIKHPS
Sbjct:    1 MSYYCYILRSVNPLYPNNTYVGMTVNPTRRLRQHNGELVGGAKATKTRQPYEMYCIISGFP-TLHDALSYEWHIKHPS 77          
BLAST of jgi.p|Trimin1|174780 vs. uniprot
Match: A0A497PCX4_9ARCH (GIY-YIG domain-containing protein n=1 Tax=Candidatus Bathyarchaeota archaeon TaxID=2026714 RepID=A0A497PCX4_9ARCH)

HSP 1 Score: 73.6 bits (179), Expect = 1.660e-13
Identity = 49/136 (36.03%), Postives = 69/136 (50.74%), Query Frame = 0
Query:    2 SHYCYALCNDSG-RTYIGYTVCPSRRLRQHNSSIKGGAKATRGRGPWRFIYVVEYINFTASEALSLEWHIKHPSKGIGRR---GAQARTEALKCAFLRSKFTSKSA----DCRVHLTTEFARLQSHLPDVDVLLTD 129
            +HYCY L ND   +TY GYTV  ++RLRQHN  I GGA++T+    W++I +V       + AL  EW IK P      R   G + R + L       K+TS S        V +  ++  L + LPD  + +TD
Sbjct:    8 THYCYILQNDDNQKTYNGYTVNSTKRLRQHNGEITGGARSTKCSNTWKYICIVSGFPDKIN-ALQCEWRIKKPFNKRRTREYCGPEGRIKGLNHVLHLDKWTSNSVIVDFPLEVKILPKYKHLLTDLPDY-ITVTD 141          
BLAST of jgi.p|Trimin1|174780 vs. uniprot
Match: A0A388JXK1_CHABU (Structure-specific endonuclease subunit SLX1 homolog n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388JXK1_CHABU)

HSP 1 Score: 76.6 bits (187), Expect = 1.880e-13
Identity = 53/128 (41.41%), Postives = 69/128 (53.91%), Query Frame = 0
Query:   12 SGRTYIGYTVCPSRRLRQHNSSIKGGAKATRGRGPWRFIYVVEYINFTASEALSLEWHIKHPSKGIG-RRGAQA-RTEALKCAFLRSKFTSKSADCRVHLTTEFARLQSHLPDVDVLLTDAISIAKPD 137
            +G TY+G+TV P RRLRQHN SIK GA+ TR R PW  + VV Y     ++AL  EW  KHP K +  R  A+A R  A   A ++  FT  +     HL     R+Q    D  VL T+ +  A P+
Sbjct:   64 TGYTYVGFTVNPIRRLRQHNGSIKSGARQTRMRRPWEMVLVV-YGFQKQTQALRFEWAWKHPRKSVAVREAAKAVRARAGLKARIQILFTMLTVSAWRHLPI---RVQFLSRDYYVLYTNCLCPAVPE 187          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|174780 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CN45_9STRA2.880e-126100.00GIY-YIG domain-containing protein n=1 Tax=Tribonem... [more]
A0A836CJ24_9STRA1.610e-4284.93GIY-YIG domain-containing protein (Fragment) n=2 T... [more]
A0A836CIF4_9STRA3.220e-2648.00GIY-YIG domain-containing protein n=1 Tax=Tribonem... [more]
A0A835ZCR8_9STRA1.300e-2357.97GIY-YIG domain-containing protein (Fragment) n=1 T... [more]
A0A6C0CV58_9ZZZZ6.600e-1751.32GIY-YIG domain-containing protein n=1 Tax=viral me... [more]
A0A6C0F1Y7_9ZZZZ4.920e-1644.33GIY-YIG domain-containing protein n=1 Tax=viral me... [more]
A0A7L9AY03_POV013.900e-1545.05GIY-YIG domain-containing protein n=1 Tax=Pyramimo... [more]
A0A3G4ZPN0_9VIRU1.390e-1450.00GIY-YIG nuclease n=1 Tax=Terrestrivirus sp. TaxID=... [more]
A0A497PCX4_9ARCH1.660e-1336.03GIY-YIG domain-containing protein n=1 Tax=Candidat... [more]
A0A388JXK1_CHABU1.880e-1341.41Structure-specific endonuclease subunit SLX1 homol... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000305GIY-YIG endonucleasePFAMPF01541GIY-YIGcoord: 3..75
e-value: 6.0E-14
score: 52.0
IPR000305GIY-YIG endonucleasePROSITEPS50164GIY_YIGcoord: 1..80
score: 19.049103
IPR035901GIY-YIG endonuclease superfamilyGENE3D3.40.1440.10coord: 1..102
e-value: 7.9E-22
score: 79.1
IPR035901GIY-YIG endonuclease superfamilySUPERFAMILY82771GIY-YIG endonucleasecoord: 1..73
NoneNo IPR availablePANTHERPTHR20208STRUCTURE-SPECIFIC ENDONUCLEASE SUBUNIT SLX1coord: 3..147

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_117contigContig_117:391963..392484 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|174780mRNA_5126Tribonema minus UTEX_B_3156 mRNAContig_117 391963..392484 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|174780|e_gw1.117.22.1 ID=Trimin1|174780|e_gw1.117.22.1|Name=jgi.p|Trimin1|174780|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=174bp
MSHYCYALCNDSGRTYIGYTVCPSRRLRQHNSSIKGGAKATRGRGPWRFI
YVVEYINFTASEALSLEWHIKHPSKGIGRRGAQARTEALKCAFLRSKFTS
KSADCRVHLTTEFARLQSHLPDVDVLLTDAISIAKPDGRVQLEASPTCSP
TCCSTLKVPYMLLHPKGYNLKSE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000305GIY-YIG_endonuc
IPR035901GIY-YIG_endonuc_sf