Trimin1|173768|e_gw1.106.64.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|173768
Unique NameTrimin1|173768|e_gw1.106.64.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length95
Homology
BLAST of jgi.p|Trimin1|173768 vs. uniprot
Match: A0A835ZFY7_9STRA (Histone H4 (Fragment) n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFY7_9STRA)

HSP 1 Score: 187 bits (476), Expect = 2.520e-60
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0
Query:    1 MPPRTGGHVIRHRKVLRDNILGVTNAAIRRLCRRGGVKRISKLVYEETRGVLKVFLEGIVRDAVTYTEHARRKTVTSLDVVLALKRLGRPLYGFG 95
            MPPRTGGHVIRHRKVLRDNILGVTNAAIRRLCRRGGVKRISKLVYEETRGVLKVFLEGIVRDAVTYTEHARRKTVTSLDVVLALKRLGRPLYGFG
Sbjct:    1 MPPRTGGHVIRHRKVLRDNILGVTNAAIRRLCRRGGVKRISKLVYEETRGVLKVFLEGIVRDAVTYTEHARRKTVTSLDVVLALKRLGRPLYGFG 95          
BLAST of jgi.p|Trimin1|173768 vs. uniprot
Match: A0A669DB70_ORENI (Histone H4 n=5 Tax=Clupeocephala TaxID=186625 RepID=A0A669DB70_ORENI)

HSP 1 Score: 142 bits (359), Expect = 1.670e-42
Identity = 71/92 (77.17%), Postives = 80/92 (86.96%), Query Frame = 0
Query:    4 RTGGHVIRHRKVLRDNILGVTNAAIRRLCRRGGVKRISKLVYEETRGVLKVFLEGIVRDAVTYTEHARRKTVTSLDVVLALKRLGRPLYGFG 95
            ++GG   RHRKVLRDNI G+T  AIRRL RRGGVKRIS L+YEETRGVLKVFLE ++RDAVTYTEHA+RKTVT++DVV ALKR GR LYGFG
Sbjct:    1 KSGGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFG 92          
BLAST of jgi.p|Trimin1|173768 vs. uniprot
Match: A0A836CBN9_9STRA (Histone H4 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBN9_9STRA)

HSP 1 Score: 142 bits (359), Expect = 1.880e-42
Identity = 74/97 (76.29%), Postives = 80/97 (82.47%), Query Frame = 0
Query:    1 MPPRTGGHVI--RHRKVLRDNILGVTNAAIRRLCRRGGVKRISKLVYEETRGVLKVFLEGIVRDAVTYTEHARRKTVTSLDVVLALKRLGRPLYGFG 95
            MPPR     +  RH K LRDNI G+T  AIRRLCRRGGVKRIS L+YEE RGVLKVFLE +V DAVTYTEHA+RKTVTSLDVVLALKR GRP+YGFG
Sbjct:    1 MPPRRAPRTLPKRHGKKLRDNIQGITKPAIRRLCRRGGVKRISGLIYEEARGVLKVFLENVVCDAVTYTEHAKRKTVTSLDVVLALKRQGRPIYGFG 97          
BLAST of jgi.p|Trimin1|173768 vs. uniprot
Match: A0A836CMT6_9STRA (Histone H4 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMT6_9STRA)

HSP 1 Score: 142 bits (359), Expect = 2.190e-42
Identity = 72/89 (80.90%), Postives = 79/89 (88.76%), Query Frame = 0
Query:    7 GHVIRHRKVLRDNILGVTNAAIRRLCRRGGVKRISKLVYEETRGVLKVFLEGIVRDAVTYTEHARRKTVTSLDVVLALKRLGRPLYGFG 95
            G   RHRKVLRDNI G+T AAIRRL RRGGVKRIS L+YEETRGVLKVFLE ++RD+VTYTEHARRKTVT++DVVLALKR GR LYGFG
Sbjct:   14 GGAKRHRKVLRDNIQGITKAAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVLALKRQGRVLYGFG 102          
BLAST of jgi.p|Trimin1|173768 vs. uniprot
Match: A0A7L2ACY7_9GRUI (Histone H4 (Fragment) n=2 Tax=Amniota TaxID=32524 RepID=A0A7L2ACY7_9GRUI)

HSP 1 Score: 142 bits (358), Expect = 3.200e-42
Identity = 71/89 (79.78%), Postives = 78/89 (87.64%), Query Frame = 0
Query:    7 GHVIRHRKVLRDNILGVTNAAIRRLCRRGGVKRISKLVYEETRGVLKVFLEGIVRDAVTYTEHARRKTVTSLDVVLALKRLGRPLYGFG 95
            G   RHRKVLRDNI G+T  AIRRL RRGGVKRIS L+YEETRGVLKVFLE ++RDAVTYTEHA+RKTVT++DVV ALKR GRPLYGFG
Sbjct:   14 GGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRPLYGFG 102          
BLAST of jgi.p|Trimin1|173768 vs. uniprot
Match: A0A673GAT9_9TELE (Histone H4 n=1 Tax=Sinocyclocheilus rhinocerous TaxID=307959 RepID=A0A673GAT9_9TELE)

HSP 1 Score: 142 bits (357), Expect = 3.360e-42
Identity = 72/92 (78.26%), Postives = 80/92 (86.96%), Query Frame = 0
Query:    4 RTGGHVIRHRKVLRDNILGVTNAAIRRLCRRGGVKRISKLVYEETRGVLKVFLEGIVRDAVTYTEHARRKTVTSLDVVLALKRLGRPLYGFG 95
            RTG  + RHRKVLRDNI G+T  AIRRL RRGGVKRIS L+YEETRGVLKVFLE ++RDAVTYTEHA+RKTVT++DVV ALKR GR LYGFG
Sbjct:    1 RTGLGLDRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFG 92          
BLAST of jgi.p|Trimin1|173768 vs. uniprot
Match: A0A3B4USK2_SERDU (Histone H4 n=8 Tax=Clupeocephala TaxID=186625 RepID=A0A3B4USK2_SERDU)

HSP 1 Score: 142 bits (357), Expect = 3.680e-42
Identity = 70/89 (78.65%), Postives = 78/89 (87.64%), Query Frame = 0
Query:    7 GHVIRHRKVLRDNILGVTNAAIRRLCRRGGVKRISKLVYEETRGVLKVFLEGIVRDAVTYTEHARRKTVTSLDVVLALKRLGRPLYGFG 95
            G + RHRKVLRDNI G+T  AIRRL RRGGVKRIS L+YEETRGVLKVFLE ++RDAVTYTEHA+RKTVT++DVV ALKR GR LYGFG
Sbjct:    7 GEITRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFG 95          
BLAST of jgi.p|Trimin1|173768 vs. uniprot
Match: A0A3B5RBQ9_XIPMA (Histone H4 n=6 Tax=Osteoglossocephalai TaxID=1489341 RepID=A0A3B5RBQ9_XIPMA)

HSP 1 Score: 141 bits (356), Expect = 4.500e-42
Identity = 71/90 (78.89%), Postives = 78/90 (86.67%), Query Frame = 0
Query:    6 GGHVIRHRKVLRDNILGVTNAAIRRLCRRGGVKRISKLVYEETRGVLKVFLEGIVRDAVTYTEHARRKTVTSLDVVLALKRLGRPLYGFG 95
            GG   RHRKVLRDNI G+T  AIRRL RRGGVKRIS L+YEETRGVLKVFLE ++RDAVTYTEHA+RKTVT++DVV ALKR GR LYGFG
Sbjct:    1 GGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFG 90          
BLAST of jgi.p|Trimin1|173768 vs. uniprot
Match: A0A3P8W8U9_CYNSE (Histone H4 n=23 Tax=Clupeocephala TaxID=186625 RepID=A0A3P8W8U9_CYNSE)

HSP 1 Score: 141 bits (356), Expect = 4.770e-42
Identity = 72/92 (78.26%), Postives = 79/92 (85.87%), Query Frame = 0
Query:    4 RTGGHVIRHRKVLRDNILGVTNAAIRRLCRRGGVKRISKLVYEETRGVLKVFLEGIVRDAVTYTEHARRKTVTSLDVVLALKRLGRPLYGFG 95
            RTG    RHRKVLRDNI G+T  AIRRL RRGGVKRIS L+YEETRGVLKVFLE ++RDAVTYTEHA+RKTVT++DVV ALKR GR LYGFG
Sbjct:    1 RTGIGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFG 92          
BLAST of jgi.p|Trimin1|173768 vs. uniprot
Match: B4FNQ5_MAIZE (Histone H4 n=2 Tax=Eukaryota TaxID=2759 RepID=B4FNQ5_MAIZE)

HSP 1 Score: 141 bits (356), Expect = 6.460e-42
Identity = 70/89 (78.65%), Postives = 78/89 (87.64%), Query Frame = 0
Query:    7 GHVIRHRKVLRDNILGVTNAAIRRLCRRGGVKRISKLVYEETRGVLKVFLEGIVRDAVTYTEHARRKTVTSLDVVLALKRLGRPLYGFG 95
            G   RHRKVLRDNI G+T  AIRRL RRGGVKRIS+L+YEETRGVLK+FLE ++RDAVTYTEHARRKTVT++DVV ALKR GR LYGFG
Sbjct:   14 GGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISRLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 102          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|173768 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZFY7_9STRA2.520e-60100.00Histone H4 (Fragment) n=2 Tax=Tribonema minus TaxI... [more]
A0A669DB70_ORENI1.670e-4277.17Histone H4 n=5 Tax=Clupeocephala TaxID=186625 RepI... [more]
A0A836CBN9_9STRA1.880e-4276.29Histone H4 (Fragment) n=1 Tax=Tribonema minus TaxI... [more]
A0A836CMT6_9STRA2.190e-4280.90Histone H4 (Fragment) n=1 Tax=Tribonema minus TaxI... [more]
A0A7L2ACY7_9GRUI3.200e-4279.78Histone H4 (Fragment) n=2 Tax=Amniota TaxID=32524 ... [more]
A0A673GAT9_9TELE3.360e-4278.26Histone H4 n=1 Tax=Sinocyclocheilus rhinocerous Ta... [more]
A0A3B4USK2_SERDU3.680e-4278.65Histone H4 n=8 Tax=Clupeocephala TaxID=186625 RepI... [more]
A0A3B5RBQ9_XIPMA4.500e-4278.89Histone H4 n=6 Tax=Osteoglossocephalai TaxID=14893... [more]
A0A3P8W8U9_CYNSE4.770e-4278.26Histone H4 n=23 Tax=Clupeocephala TaxID=186625 Rep... [more]
B4FNQ5_MAIZE6.460e-4278.65Histone H4 n=2 Tax=Eukaryota TaxID=2759 RepID=B4FN... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001951Histone H4PRINTSPR00623HISTONEH4coord: 55..69
score: 77.65
coord: 70..82
score: 73.53
coord: 33..53
score: 86.27
coord: 82..93
score: 73.28
coord: 13..32
score: 69.56
IPR001951Histone H4SMARTSM00417h44coord: 11..83
e-value: 8.1E-23
score: 91.8
IPR009072Histone-foldGENE3D1.10.20.10Histone, subunit Acoord: 5..95
e-value: 8.4E-43
score: 146.6
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 7..94
IPR035425CENP-T/Histone H4, histone foldPFAMPF15511CENP-T_Ccoord: 30..87
e-value: 3.1E-7
score: 30.4
NoneNo IPR availablePANTHERPTHR10484HISTONE H4coord: 7..95
NoneNo IPR availablePANTHERPTHR10484:SF185HISTONE H4coord: 7..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_106contigContig_106:47634..47918 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|173768mRNA_9467Tribonema minus UTEX_B_3156 mRNAContig_106 47634..47918 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|173768|e_gw1.106.64.1 ID=Trimin1|173768|e_gw1.106.64.1|Name=jgi.p|Trimin1|173768|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=95bp
MPPRTGGHVIRHRKVLRDNILGVTNAAIRRLCRRGGVKRISKLVYEETRG
VLKVFLEGIVRDAVTYTEHARRKTVTSLDVVLALKRLGRPLYGFG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001951Histone_H4
IPR009072Histone-fold
IPR035425CENP-T/H4_C