Trimin1|173487|e_gw1.103.21.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|173487
Unique NameTrimin1|173487|e_gw1.103.21.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length87
Homology
BLAST of jgi.p|Trimin1|173487 vs. uniprot
Match: A0A835ZER3_9STRA (Ubiquitin-like protein ATG12 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZER3_9STRA)

HSP 1 Score: 183 bits (465), Expect = 6.510e-59
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0
Query:    1 VRIHFMPISNAPILRQTKFRVPGSWTFQDLQASLRTQLKLPSSTPLFVYCNSAFCPSPDQILIELFLCFGTGGELVINYSLSEAWG 86
            VRIHFMPISNAPILRQTKFRVPGSWTFQDLQASLRTQLKLPSSTPLFVYCNSAFCPSPDQILIELFLCFGTGGELVINYSLSEAWG
Sbjct:    1 VRIHFMPISNAPILRQTKFRVPGSWTFQDLQASLRTQLKLPSSTPLFVYCNSAFCPSPDQILIELFLCFGTGGELVINYSLSEAWG 86          
BLAST of jgi.p|Trimin1|173487 vs. uniprot
Match: D7G0N6_ECTSI (Ubiquitin-like protein ATG12 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0N6_ECTSI)

HSP 1 Score: 114 bits (285), Expect = 1.010e-29
Identity = 48/85 (56.47%), Postives = 68/85 (80.00%), Query Frame = 0
Query:    1 VRIHFMPISNAPILRQTKFRVPGSWTFQDLQASLRTQLKLPSSTPLFVYCNSAFCPSPDQILIELFLCFGTGGELVINYSLSEAW 85
            V++HF PI+NAPILR++KF+V  +W   +L+ASLR+ L++  +TPLF+YCNSAF PSPDQ L +L+ CF    EL++NYS++EAW
Sbjct:  146 VKVHFKPIANAPILRKSKFQVNSAWNCSELEASLRSMLQISDTTPLFLYCNSAFEPSPDQSLSDLYKCFNVNKELLMNYSITEAW 230          
BLAST of jgi.p|Trimin1|173487 vs. uniprot
Match: A0A7S2CZJ6_9STRA (Ubiquitin-like protein ATG12 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CZJ6_9STRA)

HSP 1 Score: 105 bits (263), Expect = 1.360e-27
Identity = 46/86 (53.49%), Postives = 60/86 (69.77%), Query Frame = 0
Query:    1 VRIHFMPISNAPILRQTKFRVPGSWTFQDLQASLRTQLKLPSSTPLFVYCNSAFCPSPDQILIELFLCFGTGGELVINYSLSEAWG 86
            VR+HF  + +API+R+ KF++     F  +   LR QL+L  +TPLFVYCNSAFCPSPDQ L +L+ CF    ELV+NY + EAWG
Sbjct:   42 VRVHFQAVGSAPIMRKNKFQIGAHERFATIPKFLRKQLRLDENTPLFVYCNSAFCPSPDQRLQDLYQCFQRSNELVLNYCVQEAWG 127          
BLAST of jgi.p|Trimin1|173487 vs. uniprot
Match: F0WHJ6_9STRA (Ubiquitin-like protein ATG12 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WHJ6_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 1.850e-23
Identity = 43/86 (50.00%), Postives = 57/86 (66.28%), Query Frame = 0
Query:    1 VRIHFMPISNAPILRQTKFRVPGSWTFQDLQASLRTQLKLPSSTPLFVYCNSAFCPSPDQILIELFLCFGTGGELVINYSLSEAWG 86
            V +HF+ + NAPIL++TKF +  + T   +   LR QLKL  S  LF+YCN AF P+PDQ L++L  CF     LV+NYSL+ AWG
Sbjct:    7 VTLHFVAVGNAPILQKTKFTIDANDTLSVVYDFLRKQLKLKLSDALFIYCNRAFAPAPDQSLLDLQKCFSVDNVLVLNYSLTHAWG 92          
BLAST of jgi.p|Trimin1|173487 vs. uniprot
Match: M4BM24_HYAAE (Ubiquitin-like protein ATG12 n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BM24_HYAAE)

HSP 1 Score: 94.0 bits (232), Expect = 4.210e-23
Identity = 43/86 (50.00%), Postives = 57/86 (66.28%), Query Frame = 0
Query:    1 VRIHFMPISNAPILRQTKFRVPGSWTFQDLQASLRTQLKLPSSTPLFVYCNSAFCPSPDQILIELFLCFGTGGELVINYSLSEAWG 86
            V + F+ + NAP++++TKF V G      +   LR QL+L  +  LFVYCNS+F PSPDQ L  LF CF  G  LV+NYSL++AWG
Sbjct:   24 VTLQFVAVGNAPLMKRTKFTVSGHDQLSVVYRFLRKQLRLKDTESLFVYCNSSFAPSPDQRLSSLFQCFQVGDVLVLNYSLTQAWG 109          
BLAST of jgi.p|Trimin1|173487 vs. uniprot
Match: A0A1X2IHN3_9FUNG (Ubiquitin-like protein ATG12 n=1 Tax=Absidia repens TaxID=90262 RepID=A0A1X2IHN3_9FUNG)

HSP 1 Score: 94.4 bits (233), Expect = 7.310e-23
Identity = 42/86 (48.84%), Postives = 58/86 (67.44%), Query Frame = 0
Query:    1 VRIHFMPISNAPILRQTKFRVPGSWTFQDLQASLRTQLKLPSSTPLFVYCNSAFCPSPDQILIELFLCFGTGGELVINYSLSEAWG 86
            V + F  I NAPIL+Q+ +++  S  FQ +   LR +L+   S PLF+Y NSAF P+PD+I+  L+ CFGTGG L+INY  + AWG
Sbjct:   57 VIVRFAAIGNAPILKQSYYKITASNKFQTVIQFLRKELRYQGSDPLFLYINSAFSPAPDEIVSNLYKCFGTGGHLIINYCTTAAWG 142          
BLAST of jgi.p|Trimin1|173487 vs. uniprot
Match: A0A8K1FIP1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FIP1_PYTOL)

HSP 1 Score: 93.2 bits (230), Expect = 8.020e-23
Identity = 43/86 (50.00%), Postives = 58/86 (67.44%), Query Frame = 0
Query:    1 VRIHFMPISNAPILRQTKFRVPGSWTFQDLQASLRTQLKLPSSTPLFVYCNSAFCPSPDQILIELFLCFGTGGELVINYSLSEAWG 86
            V + F+ + NAP++++TKF V GS     +   L+ QL+L  +  LFVYCNS+F PSPDQ L  LF CF  G  LV+NYSL++AWG
Sbjct:   22 VMLQFVAVGNAPLMKRTKFTVNGSDALSVVYKFLKKQLRLKDTDALFVYCNSSFAPSPDQKLSYLFECFQVGEVLVLNYSLTQAWG 107          
BLAST of jgi.p|Trimin1|173487 vs. uniprot
Match: K3X0L1_GLOUD (Ubiquitin-like protein ATG12 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X0L1_GLOUD)

HSP 1 Score: 90.9 bits (224), Expect = 5.700e-22
Identity = 41/86 (47.67%), Postives = 57/86 (66.28%), Query Frame = 0
Query:    1 VRIHFMPISNAPILRQTKFRVPGSWTFQDLQASLRTQLKLPSSTPLFVYCNSAFCPSPDQILIELFLCFGTGGELVINYSLSEAWG 86
            V + F+ + NAP++++TKF V G      +   L+ QL+L  +  LFVYCNS+F PSPDQ L  LF CF  G  L++NYSL++AWG
Sbjct:   17 VTLQFVAVGNAPLMKRTKFTVNGHDQLSVVYKFLKKQLRLKDTDALFVYCNSSFAPSPDQKLNSLFECFQVGEMLILNYSLTQAWG 102          
BLAST of jgi.p|Trimin1|173487 vs. uniprot
Match: A0A485KW31_9STRA (Ubiquitin-like protein ATG12 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KW31_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 8.150e-22
Identity = 42/86 (48.84%), Postives = 55/86 (63.95%), Query Frame = 0
Query:    1 VRIHFMPISNAPILRQTKFRVPGSWTFQDLQASLRTQLKLPSSTPLFVYCNSAFCPSPDQILIELFLCFGTGGELVINYSLSEAWG 86
            V I FM +  API++++KF V G+     +   LR QL+L     LFVYCN+AF P+PDQ + ELF CF   G LV+NYS + AWG
Sbjct:   30 VTIQFMAVGGAPIMKRSKFTVNGADPLSHVYIFLRKQLRLKDEDSLFVYCNNAFAPTPDQRMSELFECFQINGALVLNYSRTHAWG 115          
BLAST of jgi.p|Trimin1|173487 vs. uniprot
Match: B8C4Q5_THAPS (Ubiquitin-like protein ATG12 (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C4Q5_THAPS)

HSP 1 Score: 89.7 bits (221), Expect = 1.200e-21
Identity = 41/86 (47.67%), Postives = 60/86 (69.77%), Query Frame = 0
Query:    1 VRIHFMPISNAPILRQTKFRVPGSWTFQDLQASLRTQLKLPSSTPLFVYCNSAFCPSPDQILIELFLCFGTGGELVINYSLSEAWG 86
            V++HF+ + +APIL+++KF +     F    A LR  L+L S+  LF+Y N+AF PSPD+ + +L+ CFG  GELV++YSL EAWG
Sbjct:    6 VKVHFVAVGSAPILKKSKFLIGEEDEFGVATAFLRRLLRLDSAPSLFLYINAAFVPSPDERIGDLYDCFGVRGELVVHYSLQEAWG 91          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|173487 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZER3_9STRA6.510e-59100.00Ubiquitin-like protein ATG12 (Fragment) n=1 Tax=Tr... [more]
D7G0N6_ECTSI1.010e-2956.47Ubiquitin-like protein ATG12 n=1 Tax=Ectocarpus si... [more]
A0A7S2CZJ6_9STRA1.360e-2753.49Ubiquitin-like protein ATG12 n=1 Tax=Dictyocha spe... [more]
F0WHJ6_9STRA1.850e-2350.00Ubiquitin-like protein ATG12 n=1 Tax=Albugo laibac... [more]
M4BM24_HYAAE4.210e-2350.00Ubiquitin-like protein ATG12 n=1 Tax=Hyaloperonosp... [more]
A0A1X2IHN3_9FUNG7.310e-2348.84Ubiquitin-like protein ATG12 n=1 Tax=Absidia repen... [more]
A0A8K1FIP1_PYTOL8.020e-2350.00Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3X0L1_GLOUD5.700e-2247.67Ubiquitin-like protein ATG12 n=1 Tax=Globisporangi... [more]
A0A485KW31_9STRA8.150e-2248.84Ubiquitin-like protein ATG12 n=1 Tax=Aphanomyces s... [more]
B8C4Q5_THAPS1.200e-2147.67Ubiquitin-like protein ATG12 (Fragment) n=1 Tax=Th... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007242Ubiquitin-like protein Atg12PFAMPF04110APG12coord: 1..86
e-value: 1.5E-26
score: 92.6
IPR007242Ubiquitin-like protein Atg12PANTHERPTHR13385AUTOPHAGY PROTEIN 12coord: 1..86
NoneNo IPR availableGENE3D3.10.20.90coord: 1..86
e-value: 1.1E-28
score: 101.6
NoneNo IPR availableCDDcd01612Ubl_ATG12coord: 1..85
e-value: 3.48968E-37
score: 118.003
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 1..85

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_103contigContig_103:403218..403947 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|173487mRNA_15123Tribonema minus UTEX_B_3156 mRNAContig_103 403218..403947 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|173487|e_gw1.103.21.1 ID=Trimin1|173487|e_gw1.103.21.1|Name=jgi.p|Trimin1|173487|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=87bp
VRIHFMPISNAPILRQTKFRVPGSWTFQDLQASLRTQLKLPSSTPLFVYC
NSAFCPSPDQILIELFLCFGTGGELVINYSLSEAWG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007242Atg12
IPR029071Ubiquitin-like_domsf